RNA–Protein interactions for RNA: ENST00000590830.5

MBD3-208, Transcript of methyl-CpG binding domain protein 3, humanhuman

TSL 1 (best)

Gene MBD3, Length 1,035 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3-208ENST00000590830 KIAA0895LQ68EN5 471 aa22.8■■□□□ 1.24
MBD3-208ENST00000590830 TXNRD3NBQ6F5E7 133 aa22.8■■□□□ 1.24
MBD3-208ENST00000590830 RABEPKQ7Z6M1 372 aa22.8■■□□□ 1.24
MBD3-208ENST00000590830 UMODL1-AS1Q8N2C9 162 aa22.8■■□□□ 1.24
MBD3-208ENST00000590830 OR2I1PQ8NGU4 316 aa22.8■■□□□ 1.24
MBD3-208ENST00000590830 VOPP1Q96AW1 172 aa22.8■■□□□ 1.24
MBD3-208ENST00000590830 HMCESQ96FZ2 354 aa22.8■■□□□ 1.24
MBD3-208ENST00000590830 CEP44Q9C0F1 390 aa22.8■■□□□ 1.24
MBD3-208ENST00000590830 CATSPERBQ9H7T0 1116 aa22.8■■□□□ 1.24
MBD3-208ENST00000590830 EBF2Q9HAK2 575 aa22.8■■□□□ 1.24
MBD3-208ENST00000590830 CXorf51AA0A1B0GTR3 108 aa22.79■■□□□ 1.24
MBD3-208ENST00000590830 A0A1B0GTW7 788 aa22.79■■□□□ 1.24
MBD3-208ENST00000590830 RASA4BC9J798 803 aa22.79■■□□□ 1.24
MBD3-208ENST00000590830 ARHGAP33O14559 1287 aa22.79■■□□□ 1.24
MBD3-208ENST00000590830 RASA4O43374 803 aa22.79■■□□□ 1.24
MBD3-208ENST00000590830 GNSP15586 552 aa22.79■■□□□ 1.24
MBD3-208ENST00000590830 HTR7P34969 479 aa22.79■■□□□ 1.24
MBD3-208ENST00000590830 TPI1P60174 286 aa22.79■■□□□ 1.24
MBD3-208ENST00000590830 BNC1Q01954 994 aa22.79■■□□□ 1.24
MBD3-208ENST00000590830 ACAP1Q15027 740 aa22.79■■□□□ 1.24
MBD3-208ENST00000590830 ARSIQ5FYB1 569 aa22.79■■□□□ 1.24
MBD3-208ENST00000590830 KCNT1Q5JUK3 1230 aa22.79■■□□□ 1.24
MBD3-208ENST00000590830 FAM46CQ5VWP2 391 aa22.79■■□□□ 1.24
MBD3-208ENST00000590830 GAS2L3Q86XJ1 694 aa22.79■■□□□ 1.24
MBD3-208ENST00000590830 CPNE8Q86YQ8 564 aa22.79■■□□□ 1.24
MBD3-208ENST00000590830 PSTKQ8IV42 348 aaKnown RBP22.79■■□□□ 1.24
MBD3-208ENST00000590830 TMIEQ8NEW7 156 aa22.79■■□□□ 1.24
MBD3-208ENST00000590830 OR2T34Q8NGX1 318 aa22.79■■□□□ 1.24
MBD3-208ENST00000590830 OR14C36Q8NHC7 312 aa22.79■■□□□ 1.24
MBD3-208ENST00000590830 SNX19Q92543 992 aa22.79■■□□□ 1.24
MBD3-208ENST00000590830 ARRDC3Q96B67 414 aa22.79■■□□□ 1.24
MBD3-208ENST00000590830 LRRC19Q9H756 370 aa22.79■■□□□ 1.24
MBD3-208ENST00000590830 SUSD2Q9UGT4 822 aa22.79■■□□□ 1.24
MBD3-208ENST00000590830 ANAPC7Q9UJX3 599 aa22.79■■□□□ 1.24
MBD3-208ENST00000590830 CACNA1AO00555 2505 aa22.79■■□□□ 1.24
MBD3-208ENST00000590830 PI4KAP42356 2102 aa22.79■■□□□ 1.24
MBD3-208ENST00000590830 CHD5Q8TDI0 1954 aa22.78■■□□□ 1.24
MBD3-208ENST00000590830 SSU72P8A0A1W2PR75 194 aa22.78■■□□□ 1.24
MBD3-208ENST00000590830 EEF2KO00418 725 aaKnown RBP22.78■■□□□ 1.24
MBD3-208ENST00000590830 BCAT2O15382 392 aaPredicted RBP22.78■■□□□ 1.24
MBD3-208ENST00000590830 FGF10O15520 208 aaPredicted RBP22.78■■□□□ 1.24
MBD3-208ENST00000590830 YBEYP58557 167 aaPredicted RBP22.78■■□□□ 1.24
MBD3-208ENST00000590830 PIGHQ14442 188 aaPredicted RBP22.78■■□□□ 1.24
MBD3-208ENST00000590830 CARD16Q5EG05 197 aa22.78■■□□□ 1.24
MBD3-208ENST00000590830 AGBL4Q5VU57 503 aa22.78■■□□□ 1.24
MBD3-208ENST00000590830 ERMP1Q7Z2K6 904 aa22.78■■□□□ 1.24
MBD3-208ENST00000590830 PCDH20Q8N6Y1 951 aaKnown RBP22.78■■□□□ 1.24
MBD3-208ENST00000590830 NIPA2Q8N8Q9 360 aa22.78■■□□□ 1.24
MBD3-208ENST00000590830 NETO2Q8NC67 525 aa22.78■■□□□ 1.24
MBD3-208ENST00000590830 ISG20Q96AZ6 181 aaKnown RBP22.78■■□□□ 1.24
MBD3-208ENST00000590830 TRIM5Q9C035 493 aa22.78■■□□□ 1.24
MBD3-208ENST00000590830 CWC15Q9P013 229 aaKnown RBP22.78■■□□□ 1.24
MBD3-208ENST00000590830 WASF2Q9Y6W5 498 aa22.78■■□□□ 1.24
MBD3-208ENST00000590830 LRRC72A6NJI9 287 aa22.77■■□□□ 1.24
MBD3-208ENST00000590830 EIF3CLB5ME19 914 aaKnown RBP22.77■■□□□ 1.24
MBD3-208ENST00000590830 C1QTNF3-AMACRE9PGA6 284 aa22.77■■□□□ 1.24
MBD3-208ENST00000590830 CD27P26842 260 aa22.77■■□□□ 1.24
MBD3-208ENST00000590830 DNA2P51530 1060 aa22.77■■□□□ 1.24
MBD3-208ENST00000590830 TAS2R38P59533 333 aa22.77■■□□□ 1.24
MBD3-208ENST00000590830 SERINC3Q13530 473 aa22.77■■□□□ 1.24
MBD3-208ENST00000590830 PPP6R3Q5H9R7 873 aaPredicted RBP22.77■■□□□ 1.24
MBD3-208ENST00000590830 RFX8Q6ZV50 586 aa22.77■■□□□ 1.24
MBD3-208ENST00000590830 CELF6Q96J87 481 aaKnown RBP22.77■■□□□ 1.24
MBD3-208ENST00000590830 CCDC114Q96M63 670 aa22.77■■□□□ 1.24
MBD3-208ENST00000590830 EIF3CQ99613 913 aaKnown RBP22.77■■□□□ 1.24
MBD3-208ENST00000590830 NCAPGQ9BPX3 1015 aa22.77■■□□□ 1.24
MBD3-208ENST00000590830 GTPBP2Q9BX10 602 aaKnown RBP22.77■■□□□ 1.24
MBD3-208ENST00000590830 ZWILCHQ9H900 591 aa22.77■■□□□ 1.24
MBD3-208ENST00000590830 TM9SF3Q9HD45 589 aa22.77■■□□□ 1.24
MBD3-208ENST00000590830 ZNHIT6Q9NWK9 470 aaKnown RBP22.77■■□□□ 1.24
MBD3-208ENST00000590830 IL36AQ9UHA7 158 aa22.77■■□□□ 1.24
MBD3-208ENST00000590830 IP6K2Q9UHH9 426 aa22.77■■□□□ 1.24
MBD3-208ENST00000590830 HPCAL4Q9UM19 191 aa22.77■■□□□ 1.24
MBD3-208ENST00000590830 FARP1Q9Y4F1 1045 aaPredicted RBP22.77■■□□□ 1.24
MBD3-208ENST00000590830 PCDH15Q96QU1 1955 aa22.77■■□□□ 1.24
MBD3-208ENST00000590830 KPNA3O00505 521 aaPredicted RBP22.76■■□□□ 1.23
MBD3-208ENST00000590830 BUB1O43683 1085 aa22.76■■□□□ 1.23
MBD3-208ENST00000590830 LEFTY1O75610 366 aa22.76■■□□□ 1.23
MBD3-208ENST00000590830 RARAP10276 462 aa22.76■■□□□ 1.23
MBD3-208ENST00000590830 ERCC2P18074 760 aa22.76■■□□□ 1.23
MBD3-208ENST00000590830 GKP32189 559 aa22.76■■□□□ 1.23
MBD3-208ENST00000590830 HCAR3P49019 387 aa22.76■■□□□ 1.23
MBD3-208ENST00000590830 SLC25A11Q02978 314 aaKnown RBP22.76■■□□□ 1.23
MBD3-208ENST00000590830 SMTNL2Q2TAL5 461 aa22.76■■□□□ 1.23
MBD3-208ENST00000590830 PARP15Q460N3 678 aa22.76■■□□□ 1.23
MBD3-208ENST00000590830 BOLA3Q53S33 107 aa22.76■■□□□ 1.23
MBD3-208ENST00000590830 PIP5KL1Q5T9C9 394 aa22.76■■□□□ 1.23
MBD3-208ENST00000590830 AFMIDQ63HM1 303 aa22.76■■□□□ 1.23
MBD3-208ENST00000590830 PLPP6Q8IY26 295 aa22.76■■□□□ 1.23
MBD3-208ENST00000590830 GRIN3AQ8TCU5 1115 aa22.76■■□□□ 1.23
MBD3-208ENST00000590830 TM6SF2Q9BZW4 377 aa22.76■■□□□ 1.23
MBD3-208ENST00000590830 SLC39A8Q9C0K1 460 aa22.76■■□□□ 1.23
MBD3-208ENST00000590830 NHEJ1Q9H9Q4 299 aaPredicted RBP22.76■■□□□ 1.23
MBD3-208ENST00000590830 OSGEPQ9NPF4 335 aa22.76■■□□□ 1.23
MBD3-208ENST00000590830 SPTLC3Q9NUV7 552 aa22.76■■□□□ 1.23
MBD3-208ENST00000590830 HECAQ9UBI9 543 aaPredicted RBP22.76■■□□□ 1.23
MBD3-208ENST00000590830 NYNRINQ9P2P1 1898 aaKnown RBP22.76■■□□□ 1.23
MBD3-208ENST00000590830 TBC1D3DA0A087WVF3 549 aa22.75■■□□□ 1.23
MBD3-208ENST00000590830 TBC1D3IA0A087WXS9 549 aa22.75■■□□□ 1.23
MBD3-208ENST00000590830 TBC1D3EA0A087X179 549 aa22.75■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms