RNA–Protein interactions for RNA: ENST00000590315.5

DDX39A-213, Transcript of DExD-box helicase 39A, humanhuman

TSL 5

Gene DDX39A, Length 566 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-213ENST00000590315 PTPN7P35236 360 aa13.1□□□□□ -0.31
DDX39A-213ENST00000590315 PXNP49023 591 aaPredicted RBP13.1□□□□□ -0.31
DDX39A-213ENST00000590315 CLCN6P51797 869 aa13.1□□□□□ -0.31
DDX39A-213ENST00000590315 DGKEP52429 567 aa13.1□□□□□ -0.31
DDX39A-213ENST00000590315 OTUD4Q01804 1114 aaKnown RBP13.1□□□□□ -0.31
DDX39A-213ENST00000590315 CSTF1Q05048 431 aaKnown RBP13.1□□□□□ -0.31
DDX39A-213ENST00000590315 SLC20A2Q08357 652 aa13.1□□□□□ -0.31
DDX39A-213ENST00000590315 ADCY2Q08462 1091 aa13.1□□□□□ -0.31
DDX39A-213ENST00000590315 ITKQ08881 620 aa13.1□□□□□ -0.31
DDX39A-213ENST00000590315 SLC10A2Q12908 348 aaPredicted RBP13.1□□□□□ -0.31
DDX39A-213ENST00000590315 LBRQ14739 615 aaKnown RBP13.1□□□□□ -0.31
DDX39A-213ENST00000590315 PDK1Q15118 436 aa13.1□□□□□ -0.31
DDX39A-213ENST00000590315 CRY1Q16526 586 aa13.1□□□□□ -0.31
DDX39A-213ENST00000590315 TAZQ16635 292 aa13.1□□□□□ -0.31
DDX39A-213ENST00000590315 HNRNPA1L2Q32P51 320 aaKnown RBP13.1□□□□□ -0.31
DDX39A-213ENST00000590315 HS1BP3Q53T59 392 aa13.1□□□□□ -0.31
DDX39A-213ENST00000590315 TMCO4Q5TGY1 634 aa13.1□□□□□ -0.31
DDX39A-213ENST00000590315 KIAA1211LQ6NV74 962 aa13.1□□□□□ -0.31
DDX39A-213ENST00000590315 TSSK4Q6SA08 328 aa13.1□□□□□ -0.31
DDX39A-213ENST00000590315 TMEM92Q6UXU6 159 aa13.1□□□□□ -0.31
DDX39A-213ENST00000590315 BBS12Q6ZW61 710 aa13.1□□□□□ -0.31
DDX39A-213ENST00000590315 METTL3Q86U44 580 aaKnown RBP13.1□□□□□ -0.31
DDX39A-213ENST00000590315 C1orf210Q8IVY1 113 aa13.1□□□□□ -0.31
DDX39A-213ENST00000590315 CCDC13Q8IYE1 715 aa13.1□□□□□ -0.31
DDX39A-213ENST00000590315 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP13.1□□□□□ -0.31
DDX39A-213ENST00000590315 OR6K2Q8NGY2 324 aa13.1□□□□□ -0.31
DDX39A-213ENST00000590315 OR8D1Q8WZ84 308 aa13.1□□□□□ -0.31
DDX39A-213ENST00000590315 MYO19Q96H55 970 aa13.1□□□□□ -0.31
DDX39A-213ENST00000590315 C16orf45Q96MC5 204 aaPredicted RBP13.1□□□□□ -0.31
DDX39A-213ENST00000590315 NAPGQ99747 312 aaPredicted RBP13.1□□□□□ -0.31
DDX39A-213ENST00000590315 TPSD1Q9BZJ3 242 aa13.1□□□□□ -0.31
DDX39A-213ENST00000590315 CARD9Q9H257 536 aa13.1□□□□□ -0.31
DDX39A-213ENST00000590315 TMEM245Q9H330 911 aa13.1□□□□□ -0.31
DDX39A-213ENST00000590315 ZDHHC6Q9H6R6 413 aa13.1□□□□□ -0.31
DDX39A-213ENST00000590315 THADAQ6YHU6 1953 aa13.1□□□□□ -0.31
DDX39A-213ENST00000590315 CTAGE9A4FU28 777 aa13.09□□□□□ -0.31
DDX39A-213ENST00000590315 APOC4-APOC2K7ER74 178 aa13.09□□□□□ -0.31
DDX39A-213ENST00000590315 MCF2LO15068 1137 aa13.09□□□□□ -0.31
DDX39A-213ENST00000590315 ATP9BO43861 1147 aa13.09□□□□□ -0.31
DDX39A-213ENST00000590315 RNASEH1O60930 286 aaKnown RBP13.09□□□□□ -0.31
DDX39A-213ENST00000590315 APBB3O95704 486 aa13.09□□□□□ -0.31
DDX39A-213ENST00000590315 APOC2P02655 101 aa13.09□□□□□ -0.31
DDX39A-213ENST00000590315 CASQ1P31415 396 aa13.09□□□□□ -0.31
DDX39A-213ENST00000590315 PSMD8P48556 350 aa13.09□□□□□ -0.31
DDX39A-213ENST00000590315 NR2C2P49116 596 aa13.09□□□□□ -0.31
DDX39A-213ENST00000590315 EIF3EP60228 445 aaKnown RBP13.09□□□□□ -0.31
DDX39A-213ENST00000590315 SNRPD1P62314 119 aaKnown RBP13.09□□□□□ -0.31
DDX39A-213ENST00000590315 ATXN7L2Q5T6C5 722 aaPredicted RBP13.09□□□□□ -0.31
DDX39A-213ENST00000590315 STK40Q8N2I9 435 aa13.09□□□□□ -0.31
DDX39A-213ENST00000590315 PCDH20Q8N6Y1 951 aaKnown RBP13.09□□□□□ -0.31
DDX39A-213ENST00000590315 KDM1BQ8NB78 822 aa13.09□□□□□ -0.31
DDX39A-213ENST00000590315 GRIN3AQ8TCU5 1115 aa13.09□□□□□ -0.31
DDX39A-213ENST00000590315 GANCQ8TET4 914 aa13.09□□□□□ -0.31
DDX39A-213ENST00000590315 TFB1MQ8WVM0 346 aaKnown RBP13.09□□□□□ -0.31
DDX39A-213ENST00000590315 CASKIN2Q8WXE0 1202 aa13.09□□□□□ -0.31
DDX39A-213ENST00000590315 HDAC11Q96DB2 347 aa13.09□□□□□ -0.31
DDX39A-213ENST00000590315 GDAP1L1Q96MZ0 367 aa13.09□□□□□ -0.31
DDX39A-213ENST00000590315 WDR24Q96S15 920 aa13.09□□□□□ -0.31
DDX39A-213ENST00000590315 LGMNQ99538 433 aa13.09□□□□□ -0.31
DDX39A-213ENST00000590315 FERMT1Q9BQL6 677 aa13.09□□□□□ -0.31
DDX39A-213ENST00000590315 HERPUD2Q9BSE4 406 aa13.09□□□□□ -0.31
DDX39A-213ENST00000590315 CEP44Q9C0F1 390 aa13.09□□□□□ -0.31
DDX39A-213ENST00000590315 SLC6A17Q9H1V8 727 aa13.09□□□□□ -0.31
DDX39A-213ENST00000590315 PDFQ9HBH1 243 aa13.09□□□□□ -0.31
DDX39A-213ENST00000590315 NT5MQ9NPB1 228 aa13.09□□□□□ -0.31
DDX39A-213ENST00000590315 PRSS16Q9NQE7 514 aa13.09□□□□□ -0.31
DDX39A-213ENST00000590315 HAUS2Q9NVX0 235 aa13.09□□□□□ -0.31
DDX39A-213ENST00000590315 ZDBF2Q9HCK1 2354 aa13.08□□□□□ -0.32
DDX39A-213ENST00000590315 A0A1W2PQF6 199 aa13.08□□□□□ -0.32
DDX39A-213ENST00000590315 TARSL2A2RTX5 802 aaKnown RBP13.08□□□□□ -0.32
DDX39A-213ENST00000590315 KRIT1O00522 736 aa13.08□□□□□ -0.32
DDX39A-213ENST00000590315 MAFKO60675 156 aa13.08□□□□□ -0.32
DDX39A-213ENST00000590315 IL1BP01584 269 aa13.08□□□□□ -0.32
DDX39A-213ENST00000590315 FGGP02679 453 aa13.08□□□□□ -0.32
DDX39A-213ENST00000590315 ACADMP11310 421 aa13.08□□□□□ -0.32
DDX39A-213ENST00000590315 CCNCP24863 283 aa13.08□□□□□ -0.32
DDX39A-213ENST00000590315 MMP13P45452 471 aa13.08□□□□□ -0.32
DDX39A-213ENST00000590315 RAD51Q06609 339 aa13.08□□□□□ -0.32
DDX39A-213ENST00000590315 LONRF2Q1L5Z9 754 aa13.08□□□□□ -0.32
DDX39A-213ENST00000590315 POM121L1PQ3SYA9 428 aa13.08□□□□□ -0.32
DDX39A-213ENST00000590315 CARD16Q5EG05 197 aa13.08□□□□□ -0.32
DDX39A-213ENST00000590315 MARC1Q5VT66 337 aa13.08□□□□□ -0.32
DDX39A-213ENST00000590315 ZNF776Q68DI1 518 aaPredicted RBP13.08□□□□□ -0.32
DDX39A-213ENST00000590315 DARS2Q6PI48 645 aaKnown RBP13.08□□□□□ -0.32
DDX39A-213ENST00000590315 DSG4Q86SJ6 1040 aa13.08□□□□□ -0.32
DDX39A-213ENST00000590315 SLC13A5Q86YT5 568 aaPredicted RBP13.08□□□□□ -0.32
DDX39A-213ENST00000590315 LRRC49Q8IUZ0 686 aa13.08□□□□□ -0.32
DDX39A-213ENST00000590315 MMAAQ8IVH4 418 aaKnown RBP13.08□□□□□ -0.32
DDX39A-213ENST00000590315 CDKL3Q8IVW4 592 aaPredicted RBP13.08□□□□□ -0.32
DDX39A-213ENST00000590315 TTC13Q8NBP0 860 aa13.08□□□□□ -0.32
DDX39A-213ENST00000590315 OR2T3Q8NH03 318 aa13.08□□□□□ -0.32
DDX39A-213ENST00000590315 ACTL9Q8TC94 416 aa13.08□□□□□ -0.32
DDX39A-213ENST00000590315 PRCCQ92733 491 aaPredicted RBP13.08□□□□□ -0.32
DDX39A-213ENST00000590315 PBKQ96KB5 322 aa13.08□□□□□ -0.32
DDX39A-213ENST00000590315 ZNF599Q96NL3 588 aa13.08□□□□□ -0.32
DDX39A-213ENST00000590315 OSBPL9Q96SU4 736 aa13.08□□□□□ -0.32
DDX39A-213ENST00000590315 CEP41Q9BYV8 373 aa13.08□□□□□ -0.32
DDX39A-213ENST00000590315 HECAQ9UBI9 543 aaPredicted RBP13.08□□□□□ -0.32
DDX39A-213ENST00000590315 SEPT3Q9UH03 358 aa13.08□□□□□ -0.32
DDX39A-213ENST00000590315 EFR3BQ9Y2G0 817 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms