RNA–Protein interactions for RNA: ENST00000589759.1

ATP6V0A1-223, Transcript of ATPase H+ transporting V0 subunit a1, human

TSL 3

Gene ATP6V0A1, Length 502 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ATP6V0A1-223	ENST00000589759	RFTN1	Q14699	578 aa	Predicted RBP	5.24	□□□□□ -1.57
ATP6V0A1-223	ENST00000589759	VPS72	Q15906	364 aa		5.24	□□□□□ -1.57
ATP6V0A1-223	ENST00000589759	UBE2S	Q16763	222 aa		5.24	□□□□□ -1.57
ATP6V0A1-223	ENST00000589759	DDR2	Q16832	855 aa		5.24	□□□□□ -1.57
ATP6V0A1-223	ENST00000589759	TBRG1	Q3YBR2	411 aa		5.24	□□□□□ -1.57
ATP6V0A1-223	ENST00000589759	FBXO43	Q4G163	708 aa		5.24	□□□□□ -1.57
ATP6V0A1-223	ENST00000589759	TOR2A	Q5JU69	321 aa		5.24	□□□□□ -1.57
ATP6V0A1-223	ENST00000589759	HABP4	Q5JVS0	413 aa	Known RBP	5.24	□□□□□ -1.57
ATP6V0A1-223	ENST00000589759	FAM26F	Q5R3K3	315 aa		5.24	□□□□□ -1.57
ATP6V0A1-223	ENST00000589759	INTS11	Q5TA45	600 aa	Known RBP	5.24	□□□□□ -1.57
ATP6V0A1-223	ENST00000589759	C12orf60	Q5U649	245 aa		5.24	□□□□□ -1.57
ATP6V0A1-223	ENST00000589759	STYK1	Q6J9G0	422 aa		5.24	□□□□□ -1.57
ATP6V0A1-223	ENST00000589759	ABRAXAS1	Q6UWZ7	409 aa		5.24	□□□□□ -1.57
ATP6V0A1-223	ENST00000589759	LYPD8	Q6UX82	237 aa		5.24	□□□□□ -1.57
ATP6V0A1-223	ENST00000589759	FRMD7	Q6ZUT3	714 aa		5.24	□□□□□ -1.57
ATP6V0A1-223	ENST00000589759	SH2D5	Q6ZV89	423 aa		5.24	□□□□□ -1.57
ATP6V0A1-223	ENST00000589759	SPATC1	Q76KD6	591 aa		5.24	□□□□□ -1.57
ATP6V0A1-223	ENST00000589759	VN1R5	Q7Z5H4	357 aa		5.24	□□□□□ -1.57
ATP6V0A1-223	ENST00000589759	KRT77	Q7Z794	578 aa		5.24	□□□□□ -1.57
ATP6V0A1-223	ENST00000589759	LIX1L	Q8IVB5	337 aa		5.24	□□□□□ -1.57
ATP6V0A1-223	ENST00000589759	GLYCTK	Q8IVS8	523 aa		5.24	□□□□□ -1.57
ATP6V0A1-223	ENST00000589759	CTAGE3P	Q8IX95	158 aa		5.24	□□□□□ -1.57
ATP6V0A1-223	ENST00000589759	ADGRF2	Q8IZF7	708 aa		5.24	□□□□□ -1.57
ATP6V0A1-223	ENST00000589759	IFNL3	Q8IZI9	196 aa		5.24	□□□□□ -1.57
ATP6V0A1-223	ENST00000589759	CMTR1	Q8N1G2	835 aa	Known RBP	5.24	□□□□□ -1.57
ATP6V0A1-223	ENST00000589759	SCML4	Q8N228	414 aa		5.24	□□□□□ -1.57
ATP6V0A1-223	ENST00000589759	CADM2	Q8N3J6	435 aa		5.24	□□□□□ -1.57
ATP6V0A1-223	ENST00000589759	CHCHD4	Q8N4Q1	142 aa		5.24	□□□□□ -1.57
ATP6V0A1-223	ENST00000589759	CCDC185	Q8N715	623 aa		5.24	□□□□□ -1.57
ATP6V0A1-223	ENST00000589759	UBR7	Q8N806	425 aa		5.24	□□□□□ -1.57
ATP6V0A1-223	ENST00000589759	DTX3	Q8N9I9	347 aa		5.24	□□□□□ -1.57
ATP6V0A1-223	ENST00000589759	TDRD5	Q8NAT2	981 aa	Known RBP	5.24	□□□□□ -1.57
ATP6V0A1-223	ENST00000589759	ZSCAN1	Q8NBB4	408 aa		5.24	□□□□□ -1.57
ATP6V0A1-223	ENST00000589759	KCT2	Q8NC54	265 aa		5.24	□□□□□ -1.57
ATP6V0A1-223	ENST00000589759	PSD4	Q8NDX1	1056 aa		5.24	□□□□□ -1.57
ATP6V0A1-223	ENST00000589759	BHLHE22	Q8NFJ8	381 aa	Predicted RBP	5.24	□□□□□ -1.57
ATP6V0A1-223	ENST00000589759	OR7D4	Q8NG98	312 aa		5.24	□□□□□ -1.57
ATP6V0A1-223	ENST00000589759	OR6Q1	Q8NGQ2	317 aa		5.24	□□□□□ -1.57
ATP6V0A1-223	ENST00000589759	SLC22A8	Q8TCC7	542 aa		5.24	□□□□□ -1.57
ATP6V0A1-223	ENST00000589759	TRAF3IP1	Q8TDR0	691 aa	Predicted RBP	5.24	□□□□□ -1.57
ATP6V0A1-223	ENST00000589759	TGFBRAP1	Q8WUH2	860 aa		5.24	□□□□□ -1.57
ATP6V0A1-223	ENST00000589759	C1orf54	Q8WWF1	131 aa		5.24	□□□□□ -1.57
ATP6V0A1-223	ENST00000589759	STON2	Q8WXE9	905 aa		5.24	□□□□□ -1.57
ATP6V0A1-223	ENST00000589759	SNX19	Q92543	992 aa		5.24	□□□□□ -1.57
ATP6V0A1-223	ENST00000589759	LARP4B	Q92615	738 aa	Known RBP	5.24	□□□□□ -1.57
ATP6V0A1-223	ENST00000589759	RAD54L	Q92698	747 aa		5.24	□□□□□ -1.57
ATP6V0A1-223	ENST00000589759	HDAC11	Q96DB2	347 aa		5.24	□□□□□ -1.57
ATP6V0A1-223	ENST00000589759	RNF170	Q96K19	258 aa		5.24	□□□□□ -1.57
ATP6V0A1-223	ENST00000589759	GLT1D1	Q96MS3	346 aa		5.24	□□□□□ -1.57
ATP6V0A1-223	ENST00000589759	PWWP2A	Q96N64	755 aa		5.24	□□□□□ -1.57
ATP6V0A1-223	ENST00000589759	FAM111A	Q96PZ2	611 aa		5.24	□□□□□ -1.57
ATP6V0A1-223	ENST00000589759	STRBP	Q96SI9	672 aa	Known RBP	5.24	□□□□□ -1.57
ATP6V0A1-223	ENST00000589759	SORT1	Q99523	831 aa		5.24	□□□□□ -1.57
ATP6V0A1-223	ENST00000589759	PLIN2	Q99541	437 aa		5.24	□□□□□ -1.57
ATP6V0A1-223	ENST00000589759	NAP1L4	Q99733	375 aa	Known RBP	5.24	□□□□□ -1.57
ATP6V0A1-223	ENST00000589759	ZSCAN5A	Q9BUG6	496 aa		5.24	□□□□□ -1.57
ATP6V0A1-223	ENST00000589759	BEGAIN	Q9BUH8	593 aa		5.24	□□□□□ -1.57
ATP6V0A1-223	ENST00000589759	MTMR12	Q9C0I1	747 aa		5.24	□□□□□ -1.57
ATP6V0A1-223	ENST00000589759	GPR88	Q9GZN0	384 aa		5.24	□□□□□ -1.57
ATP6V0A1-223	ENST00000589759	NYX	Q9GZU5	481 aa		5.24	□□□□□ -1.57
ATP6V0A1-223	ENST00000589759	TMEM168	Q9H0V1	697 aa		5.24	□□□□□ -1.57
ATP6V0A1-223	ENST00000589759	KCTD10	Q9H3F6	313 aa		5.24	□□□□□ -1.57
ATP6V0A1-223	ENST00000589759	CYP4F11	Q9HBI6	524 aa		5.24	□□□□□ -1.57
ATP6V0A1-223	ENST00000589759	TM9SF3	Q9HD45	589 aa		5.24	□□□□□ -1.57
ATP6V0A1-223	ENST00000589759	MRPL40	Q9NQ50	206 aa	Known RBP	5.24	□□□□□ -1.57
ATP6V0A1-223	ENST00000589759	RPRD1B	Q9NQG5	326 aa	Known RBP	5.24	□□□□□ -1.57
ATP6V0A1-223	ENST00000589759	PRDM8	Q9NQV8	689 aa		5.24	□□□□□ -1.57
ATP6V0A1-223	ENST00000589759	XPNPEP1	Q9NQW7	623 aa		5.24	□□□□□ -1.57
ATP6V0A1-223	ENST00000589759	CHST7	Q9NS84	486 aa		5.24	□□□□□ -1.57
ATP6V0A1-223	ENST00000589759	C20orf96	Q9NUD7	363 aa	Predicted RBP	5.24	□□□□□ -1.57
ATP6V0A1-223	ENST00000589759	SMOX	Q9NWM0	555 aa		5.24	□□□□□ -1.57
ATP6V0A1-223	ENST00000589759	B3GNT2	Q9NY97	397 aa		5.24	□□□□□ -1.57
ATP6V0A1-223	ENST00000589759	DTL	Q9NZJ0	730 aa		5.24	□□□□□ -1.57
ATP6V0A1-223	ENST00000589759	EMC3	Q9P0I2	261 aa		5.24	□□□□□ -1.57
ATP6V0A1-223	ENST00000589759	GMPR2	Q9P2T1	348 aa	Known RBP	5.24	□□□□□ -1.57
ATP6V0A1-223	ENST00000589759	AJAP1	Q9UKB5	411 aa	Predicted RBP	5.24	□□□□□ -1.57
ATP6V0A1-223	ENST00000589759	CPSF3	Q9UKF6	684 aa	Known RBP	5.24	□□□□□ -1.57
ATP6V0A1-223	ENST00000589759	MAPRE3	Q9UPY8	281 aa		5.24	□□□□□ -1.57
ATP6V0A1-223	ENST00000589759	VWA7	Q9Y334	891 aa		5.24	□□□□□ -1.57
ATP6V0A1-223	ENST00000589759	GRIP1	Q9Y3R0	1128 aa		5.24	□□□□□ -1.57
ATP6V0A1-223	ENST00000589759	PCDHAC2	Q9Y5I4	1007 aa		5.24	□□□□□ -1.57
ATP6V0A1-223	ENST00000589759	AUP1	Q9Y679	476 aa		5.24	□□□□□ -1.57
ATP6V0A1-223	ENST00000589759	ZFC3H1	O60293	1989 aa	Known RBP	5.24	□□□□□ -1.57
ATP6V0A1-223	ENST00000589759	CLUH	O75153	1309 aa		5.23	□□□□□ -1.57
ATP6V0A1-223	ENST00000589759	FAM205A	Q6ZU69	1335 aa		5.23	□□□□□ -1.57
ATP6V0A1-223	ENST00000589759	CCDC194	A0A1B0GVG4	234 aa		5.23	□□□□□ -1.57
ATP6V0A1-223	ENST00000589759	TCRBV5S4A2T	A0A5A2	114 aa		5.23	□□□□□ -1.57
ATP6V0A1-223	ENST00000589759	FAM170A	A1A519	330 aa		5.23	□□□□□ -1.57
ATP6V0A1-223	ENST00000589759	PLEKHG3	A1L390	1219 aa		5.23	□□□□□ -1.57
ATP6V0A1-223	ENST00000589759	DENND3	A2RUS2	1198 aa		5.23	□□□□□ -1.57
ATP6V0A1-223	ENST00000589759	SAC3D1	A6NKF1	404 aa		5.23	□□□□□ -1.57
ATP6V0A1-223	ENST00000589759	ZNF487	B1APH4	448 aa		5.23	□□□□□ -1.57
ATP6V0A1-223	ENST00000589759	PLK4	O00444	970 aa		5.23	□□□□□ -1.57
ATP6V0A1-223	ENST00000589759	COPE	O14579	308 aa		5.23	□□□□□ -1.57
ATP6V0A1-223	ENST00000589759	ACOT8	O14734	319 aa		5.23	□□□□□ -1.57
ATP6V0A1-223	ENST00000589759	RAD51B	O15315	384 aa		5.23	□□□□□ -1.57
ATP6V0A1-223	ENST00000589759	CLDN3	O15551	220 aa		5.23	□□□□□ -1.57
ATP6V0A1-223	ENST00000589759	PHGDH	O43175	533 aa	Known RBP	5.23	□□□□□ -1.57
ATP6V0A1-223	ENST00000589759	NDUFS2	O75306	463 aa		5.23	□□□□□ -1.57
ATP6V0A1-223	ENST00000589759	UGT2B11	O75310	529 aa		5.23	□□□□□ -1.57

Retrieved 100 of 20,778 RNA–protein pairs in 22 ms