RNA–Protein interactions for RNA: ENST00000589710.5

CIRBP-225, Transcript of cold inducible RNA binding protein, human

TSL 2 BASIC

Gene CIRBP, Length 1,835 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CIRBP-225	ENST00000589710	RASSF3	Q86WH2	238 aa		20.7	■□□□□ 0.9
CIRBP-225	ENST00000589710	MZB1	Q8WU39	189 aa		20.7	■□□□□ 0.9
CIRBP-225	ENST00000589710	ZFR	Q96KR1	1074 aa	Known RBP	20.7	■□□□□ 0.9
CIRBP-225	ENST00000589710	GCNA	Q96QF7	691 aa		20.7	■□□□□ 0.9
CIRBP-225	ENST00000589710	DDX50	Q9BQ39	737 aa	Known RBP	20.7	■□□□□ 0.9
CIRBP-225	ENST00000589710	TLR9	Q9NR96	1032 aa		20.7	■□□□□ 0.9
CIRBP-225	ENST00000589710	MOCS1	Q9NZB8	636 aa		20.7	■□□□□ 0.9
CIRBP-225	ENST00000589710	IL1RAPL1	Q9NZN1	696 aa		20.7	■□□□□ 0.9
CIRBP-225	ENST00000589710	LZTS1	Q9Y250	596 aa		20.7	■□□□□ 0.9
CIRBP-225	ENST00000589710	C2orf71	A6NGG8	1288 aa		20.69	■□□□□ 0.9
CIRBP-225	ENST00000589710	AP3B1	O00203	1094 aa		20.69	■□□□□ 0.9
CIRBP-225	ENST00000589710	CLDN11	O75508	207 aa		20.69	■□□□□ 0.9
CIRBP-225	ENST00000589710	CKM	P06732	381 aa		20.69	■□□□□ 0.9
CIRBP-225	ENST00000589710	RHOC	P08134	193 aa		20.69	■□□□□ 0.9
CIRBP-225	ENST00000589710	MYL4	P12829	197 aa		20.69	■□□□□ 0.9
CIRBP-225	ENST00000589710	CA4	P22748	312 aa		20.69	■□□□□ 0.9
CIRBP-225	ENST00000589710	GNA12	Q03113	381 aa		20.69	■□□□□ 0.9
CIRBP-225	ENST00000589710	SPANXN3	Q5MJ09	141 aa		20.69	■□□□□ 0.9
CIRBP-225	ENST00000589710	TTC39B	Q5VTQ0	682 aa	Predicted RBP	20.69	■□□□□ 0.9
CIRBP-225	ENST00000589710	GAREM2	Q75VX8	874 aa		20.69	■□□□□ 0.9
CIRBP-225	ENST00000589710	SPRED2	Q7Z698	418 aa		20.69	■□□□□ 0.9
CIRBP-225	ENST00000589710	MAB21L3	Q8N8X9	362 aa		20.69	■□□□□ 0.9
CIRBP-225	ENST00000589710	OR7D4	Q8NG98	312 aa		20.69	■□□□□ 0.9
CIRBP-225	ENST00000589710	SLC22A17	Q8WUG5	538 aa		20.69	■□□□□ 0.9
CIRBP-225	ENST00000589710	CDKL2	Q92772	493 aa		20.69	■□□□□ 0.9
CIRBP-225	ENST00000589710	FATE1	Q969F0	183 aa		20.69	■□□□□ 0.9
CIRBP-225	ENST00000589710	PAIP2	Q9BPZ3	127 aa	Known RBP	20.69	■□□□□ 0.9
CIRBP-225	ENST00000589710	CORO1B	Q9BR76	489 aa		20.69	■□□□□ 0.9
CIRBP-225	ENST00000589710	SPON2	Q9BUD6	331 aa		20.69	■□□□□ 0.9
CIRBP-225	ENST00000589710	IL22	Q9GZX6	179 aa		20.69	■□□□□ 0.9
CIRBP-225	ENST00000589710	SLC25A51	Q9H1U9	297 aa		20.69	■□□□□ 0.9
CIRBP-225	ENST00000589710	ATXN3L	Q9H3M9	355 aa		20.69	■□□□□ 0.9
CIRBP-225	ENST00000589710	SLC17A6	Q9P2U8	582 aa		20.69	■□□□□ 0.9
CIRBP-225	ENST00000589710	SMG5	Q9UPR3	1016 aa	Known RBP	20.69	■□□□□ 0.9
CIRBP-225	ENST00000589710	ZNF559-ZNF177	A0A0A6YYI6	481 aa	Predicted RBP	20.69	■□□□□ 0.9
CIRBP-225	ENST00000589710	LINC01553	A4QN01	128 aa		20.69	■□□□□ 0.9
CIRBP-225	ENST00000589710	LPXN	O60711	386 aa		20.69	■□□□□ 0.9
CIRBP-225	ENST00000589710	PRAMEF11	O60813	436 aa		20.69	■□□□□ 0.9
CIRBP-225	ENST00000589710	KRT37	O76014	449 aa		20.69	■□□□□ 0.9
CIRBP-225	ENST00000589710	ARHGEF15	O94989	841 aa		20.69	■□□□□ 0.9
CIRBP-225	ENST00000589710	ZNF177	Q13360	481 aa	Predicted RBP	20.69	■□□□□ 0.9
CIRBP-225	ENST00000589710	BMPR2	Q13873	1038 aa		20.69	■□□□□ 0.9
CIRBP-225	ENST00000589710	ZNF235	Q14590	738 aa		20.69	■□□□□ 0.9
CIRBP-225	ENST00000589710	LBR	Q14739	615 aa	Known RBP	20.69	■□□□□ 0.9
CIRBP-225	ENST00000589710	PPM1L	Q5SGD2	360 aa		20.69	■□□□□ 0.9
CIRBP-225	ENST00000589710	TMC8	Q8IU68	726 aa		20.69	■□□□□ 0.9
CIRBP-225	ENST00000589710	CHD9	Q3L8U1	2897 aa		20.68	■□□□□ 0.9
CIRBP-225	ENST00000589710	CHD7	Q9P2D1	2997 aa		20.68	■□□□□ 0.9
CIRBP-225	ENST00000589710		A0A1B0GVM2	712 aa		20.68	■□□□□ 0.9
CIRBP-225	ENST00000589710		A0A1W2PRU2	124 aa		20.68	■□□□□ 0.9
CIRBP-225	ENST00000589710	CCDC78	A2IDD5	438 aa		20.68	■□□□□ 0.9
CIRBP-225	ENST00000589710	TCAF2	A6NFQ2	919 aa		20.68	■□□□□ 0.9
CIRBP-225	ENST00000589710	TRIM49D1	C9J1S8	452 aa		20.68	■□□□□ 0.9
CIRBP-225	ENST00000589710		H3BNC9	293 aa		20.68	■□□□□ 0.9
CIRBP-225	ENST00000589710	PRPF4	O43172	522 aa	Known RBP eCLIP	20.68	■□□□□ 0.9	4e-9	■■□□□ 12.1
CIRBP-225	ENST00000589710	ALDH1A2	O94788	518 aa		20.68	■□□□□ 0.9
CIRBP-225	ENST00000589710	GJA1	P17302	382 aa		20.68	■□□□□ 0.9
CIRBP-225	ENST00000589710	CD86	P42081	329 aa		20.68	■□□□□ 0.9
CIRBP-225	ENST00000589710	DSC2	Q02487	901 aa		20.68	■□□□□ 0.9
CIRBP-225	ENST00000589710	LGSN	Q5TDP6	509 aa		20.68	■□□□□ 0.9
CIRBP-225	ENST00000589710	TMCO4	Q5TGY1	634 aa		20.68	■□□□□ 0.9
CIRBP-225	ENST00000589710	KLHDC8B	Q8IXV7	354 aa		20.68	■□□□□ 0.9
CIRBP-225	ENST00000589710	MRPL43	Q8N983	215 aa	Known RBP	20.68	■□□□□ 0.9
CIRBP-225	ENST00000589710	SERBP1	Q8NC51	408 aa	Known RBP eCLIP	20.68	■□□□□ 0.9
CIRBP-225	ENST00000589710	OR52K2	Q8NGK3	314 aa		20.68	■□□□□ 0.9
CIRBP-225	ENST00000589710	TTC17	Q96AE7	1141 aa		20.68	■□□□□ 0.9
CIRBP-225	ENST00000589710	FCRL3	Q96P31	734 aa	Predicted RBP	20.68	■□□□□ 0.9
CIRBP-225	ENST00000589710	MAGEH1	Q9H213	219 aa		20.68	■□□□□ 0.9
CIRBP-225	ENST00000589710	ASAH2	Q9NR71	780 aa		20.68	■□□□□ 0.9
CIRBP-225	ENST00000589710	ZNF180	Q9UJW8	692 aa		20.68	■□□□□ 0.9
CIRBP-225	ENST00000589710	TTC24	A2A3L6	582 aa	Predicted RBP	20.67	■□□□□ 0.9
CIRBP-225	ENST00000589710	SRRM3	A6NNA2	597 aa	Predicted RBP	20.67	■□□□□ 0.9
CIRBP-225	ENST00000589710	SNRPA	P09012	282 aa	Known RBP	20.67	■□□□□ 0.9
CIRBP-225	ENST00000589710	ERVK-10	P10266	1014 aa		20.67	■□□□□ 0.9
CIRBP-225	ENST00000589710	MPP3	Q13368	585 aa		20.67	■□□□□ 0.9
CIRBP-225	ENST00000589710	POU6F1	Q14863	301 aa		20.67	■□□□□ 0.9
CIRBP-225	ENST00000589710	SPPL3	Q8TCT6	385 aa		20.67	■□□□□ 0.9
CIRBP-225	ENST00000589710	IMP4	Q96G21	291 aa	Known RBP	20.67	■□□□□ 0.9
CIRBP-225	ENST00000589710	CERS2	Q96G23	380 aa		20.67	■□□□□ 0.9
CIRBP-225	ENST00000589710	SERAC1	Q96JX3	654 aa		20.67	■□□□□ 0.9
CIRBP-225	ENST00000589710	MRGPRX2	Q96LB1	330 aa		20.67	■□□□□ 0.9
CIRBP-225	ENST00000589710	CCT8L2	Q96SF2	557 aa		20.67	■□□□□ 0.9
CIRBP-225	ENST00000589710	CHRAC1	Q9NRG0	131 aa		20.67	■□□□□ 0.9
CIRBP-225	ENST00000589710	ZFAT	Q9P243	1243 aa		20.67	■□□□□ 0.9
CIRBP-225	ENST00000589710	RWDD3	Q9Y3V2	267 aa		20.67	■□□□□ 0.9
CIRBP-225	ENST00000589710	IRAK3	Q9Y616	596 aa		20.67	■□□□□ 0.9
CIRBP-225	ENST00000589710	KRT38	O76015	456 aa		20.67	■□□□□ 0.9
CIRBP-225	ENST00000589710	USP1	O94782	785 aa		20.67	■□□□□ 0.9
CIRBP-225	ENST00000589710	OLFM2	O95897	454 aa		20.67	■□□□□ 0.9
CIRBP-225	ENST00000589710	CA3	P07451	260 aa		20.67	■□□□□ 0.9
CIRBP-225	ENST00000589710	CDC25C	P30307	473 aa		20.67	■□□□□ 0.9
CIRBP-225	ENST00000589710	RPA3	P35244	121 aa	Predicted RBP	20.67	■□□□□ 0.9
CIRBP-225	ENST00000589710	OXCT1	P55809	520 aa		20.67	■□□□□ 0.9
CIRBP-225	ENST00000589710	WNT3A	P56704	352 aa		20.67	■□□□□ 0.9
CIRBP-225	ENST00000589710	MGAT5	Q09328	741 aa		20.67	■□□□□ 0.9
CIRBP-225	ENST00000589710	NIPAL4	Q0D2K0	466 aa		20.67	■□□□□ 0.9
CIRBP-225	ENST00000589710	STXBP5	Q5T5C0	1151 aa		20.67	■□□□□ 0.9
CIRBP-225	ENST00000589710	CYS1	Q717R9	158 aa		20.67	■□□□□ 0.9
CIRBP-225	ENST00000589710	MARK2	Q7KZI7	788 aa	Known RBP	20.67	■□□□□ 0.9
CIRBP-225	ENST00000589710	CHST9	Q7L1S5	443 aa		20.67	■□□□□ 0.9

Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms