RNA–Protein interactions for RNA: ENST00000588917.2

CIRBP-220, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2

Gene CIRBP, Length 1,087 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-220ENST00000588917 PLPP6Q8IY26 295 aa19.95■□□□□ 0.78
CIRBP-220ENST00000588917 BBS5Q8N3I7 341 aa19.95■□□□□ 0.78
CIRBP-220ENST00000588917 PCDH20Q8N6Y1 951 aaKnown RBP19.95■□□□□ 0.78
CIRBP-220ENST00000588917 CCNYQ8ND76 341 aa19.95■□□□□ 0.78
CIRBP-220ENST00000588917 MAIP1Q8WWC4 291 aa19.95■□□□□ 0.78
CIRBP-220ENST00000588917 PBKQ96KB5 322 aa19.95■□□□□ 0.78
CIRBP-220ENST00000588917 ZDHHC4Q9NPG8 344 aa19.95■□□□□ 0.78
CIRBP-220ENST00000588917 ZKSCAN5Q9Y2L8 839 aa19.95■□□□□ 0.78
CIRBP-220ENST00000588917 MFHAS1Q9Y4C4 1052 aa19.95■□□□□ 0.78
CIRBP-220ENST00000588917 TTC34A8MYJ7 566 aa19.94■□□□□ 0.78
CIRBP-220ENST00000588917 J3KR12 359 aa19.94■□□□□ 0.78
CIRBP-220ENST00000588917 MFSD11O43934 449 aa19.94■□□□□ 0.78
CIRBP-220ENST00000588917 MAFKO60675 156 aa19.94■□□□□ 0.78
CIRBP-220ENST00000588917 ZNF189O75820 626 aaPredicted RBP19.94■□□□□ 0.78
CIRBP-220ENST00000588917 RECQLP46063 649 aaPredicted RBP19.94■□□□□ 0.78
CIRBP-220ENST00000588917 NUMBP49757 651 aa19.94■□□□□ 0.78
CIRBP-220ENST00000588917 RENBPP51606 427 aa19.94■□□□□ 0.78
CIRBP-220ENST00000588917 ZNF211Q13398 564 aaPredicted RBP19.94■□□□□ 0.78
CIRBP-220ENST00000588917 CAMK2GQ13555 558 aaPredicted RBP19.94■□□□□ 0.78
CIRBP-220ENST00000588917 PKN3Q6P5Z2 889 aa19.94■□□□□ 0.78
CIRBP-220ENST00000588917 HDAC11Q96DB2 347 aa19.94■□□□□ 0.78
CIRBP-220ENST00000588917 FERMT1Q9BQL6 677 aa19.94■□□□□ 0.78
CIRBP-220ENST00000588917 FBXO4Q9UKT5 387 aa19.94■□□□□ 0.78
CIRBP-220ENST00000588917 SPTBN4Q9H254 2564 aa19.94■□□□□ 0.78
CIRBP-220ENST00000588917 ANTXRLA6NF34 631 aa19.93■□□□□ 0.78
CIRBP-220ENST00000588917 ENC1O14682 589 aa19.93■□□□□ 0.78
CIRBP-220ENST00000588917 MATN3O15232 486 aa19.93■□□□□ 0.78
CIRBP-220ENST00000588917 RNASEH1O60930 286 aaKnown RBP19.93■□□□□ 0.78
CIRBP-220ENST00000588917 CD160O95971 181 aa19.93■□□□□ 0.78
CIRBP-220ENST00000588917 PRKCHP24723 683 aa19.93■□□□□ 0.78
CIRBP-220ENST00000588917 HOXA6P31267 233 aa19.93■□□□□ 0.78
CIRBP-220ENST00000588917 NRLP54845 237 aa19.93■□□□□ 0.78
CIRBP-220ENST00000588917 SLC10A2Q12908 348 aaPredicted RBP19.93■□□□□ 0.78
CIRBP-220ENST00000588917 XRCC4Q13426 336 aa19.93■□□□□ 0.78
CIRBP-220ENST00000588917 HNRNPDQ14103 355 aaKnown RBP19.93■□□□□ 0.78
CIRBP-220ENST00000588917 LLGL1Q15334 1064 aa19.93■□□□□ 0.78
CIRBP-220ENST00000588917 MARC1Q5VT66 337 aa19.93■□□□□ 0.78
CIRBP-220ENST00000588917 DSG4Q86SJ6 1040 aa19.93■□□□□ 0.78
CIRBP-220ENST00000588917 TSTD1Q8NFU3 115 aa19.93■□□□□ 0.78
CIRBP-220ENST00000588917 FRS2Q8WU20 508 aa19.93■□□□□ 0.78
CIRBP-220ENST00000588917 PTPRN2Q92932 1015 aa19.93■□□□□ 0.78
CIRBP-220ENST00000588917 PDFQ9HBH1 243 aa19.93■□□□□ 0.78
CIRBP-220ENST00000588917 A0A1W2PQF6 199 aa19.92■□□□□ 0.78
CIRBP-220ENST00000588917 HACD1B0YJ81 288 aa19.92■□□□□ 0.78
CIRBP-220ENST00000588917 APBB3O95704 486 aa19.92■□□□□ 0.78
CIRBP-220ENST00000588917 TUBB4AP04350 444 aa19.92■□□□□ 0.78
CIRBP-220ENST00000588917 HLA-EP13747 358 aa19.92■□□□□ 0.78
CIRBP-220ENST00000588917 PRLRP16471 622 aa19.92■□□□□ 0.78
CIRBP-220ENST00000588917 SNRPD1P62314 119 aaKnown RBP19.92■□□□□ 0.78
CIRBP-220ENST00000588917 PPIDQ08752 370 aaKnown RBP19.92■□□□□ 0.78
CIRBP-220ENST00000588917 NSUN2Q08J23 767 aaKnown RBP eCLIP19.92■□□□□ 0.78
CIRBP-220ENST00000588917 SFSWAPQ12872 951 aaKnown RBP19.92■□□□□ 0.78
CIRBP-220ENST00000588917 C9orf64Q5T6V5 341 aa19.92■□□□□ 0.78
CIRBP-220ENST00000588917 DCAF12L1Q5VU92 463 aa19.92■□□□□ 0.78
CIRBP-220ENST00000588917 TMEM92Q6UXU6 159 aa19.92■□□□□ 0.78
CIRBP-220ENST00000588917 TP53INP2Q8IXH6 220 aa19.92■□□□□ 0.78
CIRBP-220ENST00000588917 HAUS1Q96CS2 278 aa19.92■□□□□ 0.78
CIRBP-220ENST00000588917 OLFM3Q96PB7 478 aa19.92■□□□□ 0.78
CIRBP-220ENST00000588917 FAM126AQ9BYI3 521 aaPredicted RBP19.92■□□□□ 0.78
CIRBP-220ENST00000588917 FRMD8P1Q9BZ68 369 aaPredicted RBP19.92■□□□□ 0.78
CIRBP-220ENST00000588917 SEMA4AQ9H3S1 761 aa19.92■□□□□ 0.78
CIRBP-220ENST00000588917 PRSS16Q9NQE7 514 aa19.92■□□□□ 0.78
CIRBP-220ENST00000588917 SEPT3Q9UH03 358 aa19.92■□□□□ 0.78
CIRBP-220ENST00000588917 AMACRQ9UHK6 382 aa19.92■□□□□ 0.78
CIRBP-220ENST00000588917 WDR87Q6ZQQ6 2873 aa19.92■□□□□ 0.78
CIRBP-220ENST00000588917 CCDC163A0A0D9SF12 145 aa19.91■□□□□ 0.78
CIRBP-220ENST00000588917 CTAGE9A4FU28 777 aa19.91■□□□□ 0.78
CIRBP-220ENST00000588917 K7ERQ8 282 aa19.91■□□□□ 0.78
CIRBP-220ENST00000588917 CES2O00748 559 aa19.91■□□□□ 0.78
CIRBP-220ENST00000588917 MCF2LO15068 1137 aa19.91■□□□□ 0.78
CIRBP-220ENST00000588917 ALOX15BO15296 676 aa19.91■□□□□ 0.78
CIRBP-220ENST00000588917 MTSS1O43312 755 aa19.91■□□□□ 0.78
CIRBP-220ENST00000588917 SMAD6O43541 496 aaKnown RBP19.91■□□□□ 0.78
CIRBP-220ENST00000588917 HSPA9P38646 679 aaKnown RBP19.91■□□□□ 0.78
CIRBP-220ENST00000588917 FOXK2Q01167 660 aa19.91■□□□□ 0.78
CIRBP-220ENST00000588917 SATB1Q01826 763 aa19.91■□□□□ 0.78
CIRBP-220ENST00000588917 RAD51Q06609 339 aa19.91■□□□□ 0.78
CIRBP-220ENST00000588917 ADCY2Q08462 1091 aa19.91■□□□□ 0.78
CIRBP-220ENST00000588917 ELAVL3Q14576 367 aaKnown RBP19.91■□□□□ 0.78
CIRBP-220ENST00000588917 LBRQ14739 615 aaKnown RBP19.91■□□□□ 0.78
CIRBP-220ENST00000588917 CARD16Q5EG05 197 aa19.91■□□□□ 0.78
CIRBP-220ENST00000588917 AADACL2Q6P093 401 aa19.91■□□□□ 0.78
CIRBP-220ENST00000588917 C22orf39Q6P5X5 142 aa19.91■□□□□ 0.78
CIRBP-220ENST00000588917 NPNTQ6UXI9 565 aa19.91■□□□□ 0.78
CIRBP-220ENST00000588917 ARHGAP36Q6ZRI8 547 aa19.91■□□□□ 0.78
CIRBP-220ENST00000588917 SLC13A5Q86YT5 568 aaPredicted RBP19.91■□□□□ 0.78
CIRBP-220ENST00000588917 CCDC13Q8IYE1 715 aa19.91■□□□□ 0.78
CIRBP-220ENST00000588917 NETO2Q8NC67 525 aa19.91■□□□□ 0.78
CIRBP-220ENST00000588917 OR2T3Q8NH03 318 aa19.91■□□□□ 0.78
CIRBP-220ENST00000588917 TFB1MQ8WVM0 346 aaKnown RBP19.91■□□□□ 0.78
CIRBP-220ENST00000588917 OR8D1Q8WZ84 308 aa19.91■□□□□ 0.78
CIRBP-220ENST00000588917 NAP1L3Q99457 506 aaPredicted RBP19.91■□□□□ 0.78
CIRBP-220ENST00000588917 EBF1Q9UH73 591 aa19.91■□□□□ 0.78
CIRBP-220ENST00000588917 GVINP1Q7Z2Y8 2422 aa19.91■□□□□ 0.78
CIRBP-220ENST00000588917 CEP104O60308 925 aa19.9■□□□□ 0.78
CIRBP-220ENST00000588917 SIN3BO75182 1162 aa19.9■□□□□ 0.78
CIRBP-220ENST00000588917 NEBLO76041 1014 aa19.9■□□□□ 0.78
CIRBP-220ENST00000588917 TMCC1O94876 653 aa19.9■□□□□ 0.78
CIRBP-220ENST00000588917 GSRP00390 522 aa19.9■□□□□ 0.78
CIRBP-220ENST00000588917 ATP1A1P05023 1023 aaKnown RBP19.9■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms