RNA–Protein interactions for RNA: ENST00000588410.1

TPM4-208, Transcript of tropomyosin 4, humanhuman

TSL 4

Gene TPM4, Length 563 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-208ENST00000588410 FOXC1Q12948 553 aa19.96■□□□□ 0.79
TPM4-208ENST00000588410 SUZ12Q15022 739 aaKnown RBP19.96■□□□□ 0.79
TPM4-208ENST00000588410 POLD3Q15054 466 aaPredicted RBP19.96■□□□□ 0.79
TPM4-208ENST00000588410 TDRD12Q587J7 1177 aaKnown RBP19.96■□□□□ 0.79
TPM4-208ENST00000588410 AGBL4Q5VU57 503 aa19.96■□□□□ 0.79
TPM4-208ENST00000588410 PLEKHA7Q6IQ23 1121 aa19.96■□□□□ 0.79
TPM4-208ENST00000588410 LAYNQ6UX15 382 aa19.96■□□□□ 0.79
TPM4-208ENST00000588410 NAXDQ8IW45 347 aa19.96■□□□□ 0.79
TPM4-208ENST00000588410 CHST14Q8NCH0 376 aa19.96■□□□□ 0.79
TPM4-208ENST00000588410 GRIN3AQ8TCU5 1115 aa19.96■□□□□ 0.79
TPM4-208ENST00000588410 ARHGEF2Q92974 986 aaKnown RBP19.96■□□□□ 0.79
TPM4-208ENST00000588410 FAM131CQ96AQ9 280 aa19.96■□□□□ 0.79
TPM4-208ENST00000588410 ZNF653Q96CK0 615 aa19.96■□□□□ 0.79
TPM4-208ENST00000588410 TRIM11Q96F44 468 aa19.96■□□□□ 0.79
TPM4-208ENST00000588410 PPP1R16AQ96I34 528 aa19.96■□□□□ 0.79
TPM4-208ENST00000588410 SERAC1Q96JX3 654 aa19.96■□□□□ 0.79
TPM4-208ENST00000588410 NDFIP2Q9NV92 336 aa19.96■□□□□ 0.79
TPM4-208ENST00000588410 CNOT8Q9UFF9 292 aaKnown RBP19.96■□□□□ 0.79
TPM4-208ENST00000588410 FNDC3AQ9Y2H6 1198 aaKnown RBP19.96■□□□□ 0.79
TPM4-208ENST00000588410 FCF1Q9Y324 198 aaKnown RBP19.96■□□□□ 0.79
TPM4-208ENST00000588410 CXorf51AA0A1B0GTR3 108 aa19.95■□□□□ 0.78
TPM4-208ENST00000588410 A0A1W2PQJ5 194 aa19.95■□□□□ 0.78
TPM4-208ENST00000588410 DDX3XO00571 662 aaKnown RBP eCLIP19.95■□□□□ 0.783e-6■■■■■ 42.7
TPM4-208ENST00000588410 VILLO15195 856 aa19.95■□□□□ 0.78
TPM4-208ENST00000588410 CTSLP07711 333 aa19.95■□□□□ 0.78
TPM4-208ENST00000588410 PPP2CBP62714 309 aa19.95■□□□□ 0.78
TPM4-208ENST00000588410 PPP2CAP67775 309 aa19.95■□□□□ 0.78
TPM4-208ENST00000588410 OGDHQ02218 1023 aa19.95■□□□□ 0.78
TPM4-208ENST00000588410 CARD16Q5EG05 197 aa19.95■□□□□ 0.78
TPM4-208ENST00000588410 ARSIQ5FYB1 569 aa19.95■□□□□ 0.78
TPM4-208ENST00000588410 DPY19L3Q6ZPD9 716 aa19.95■□□□□ 0.78
TPM4-208ENST00000588410 VPS36Q86VN1 386 aa19.95■□□□□ 0.78
TPM4-208ENST00000588410 RYBPQ8N488 228 aaPredicted RBP19.95■□□□□ 0.78
TPM4-208ENST00000588410 RTL3Q8N8U3 475 aaKnown RBP19.95■□□□□ 0.78
TPM4-208ENST00000588410 SETD7Q8WTS6 366 aaKnown RBP19.95■□□□□ 0.78
TPM4-208ENST00000588410 CPLX3Q8WVH0 158 aa19.95■□□□□ 0.78
TPM4-208ENST00000588410 IQCDQ96DY2 449 aa19.95■□□□□ 0.78
TPM4-208ENST00000588410 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP19.95■□□□□ 0.78
TPM4-208ENST00000588410 CATSPERBQ9H7T0 1116 aa19.95■□□□□ 0.78
TPM4-208ENST00000588410 EBF2Q9HAK2 575 aa19.95■□□□□ 0.78
TPM4-208ENST00000588410 NEU3Q9UQ49 428 aa19.95■□□□□ 0.78
TPM4-208ENST00000588410 BZW2Q9Y6E2 419 aaKnown RBP19.95■□□□□ 0.78
TPM4-208ENST00000588410 SCINQ9Y6U3 715 aa19.95■□□□□ 0.78
TPM4-208ENST00000588410 GON4LQ3T8J9 2241 aa19.95■□□□□ 0.78
TPM4-208ENST00000588410 RNF8O76064 485 aa19.94■□□□□ 0.78
TPM4-208ENST00000588410 TPM3P06753 285 aa19.94■□□□□ 0.78
TPM4-208ENST00000588410 MYBL1P10243 752 aa19.94■□□□□ 0.78
TPM4-208ENST00000588410 CD38P28907 300 aa19.94■□□□□ 0.78
TPM4-208ENST00000588410 MAT2AP31153 395 aaKnown RBP19.94■□□□□ 0.78
TPM4-208ENST00000588410 NUDT1P36639 197 aa19.94■□□□□ 0.78
TPM4-208ENST00000588410 DNAAF5Q86Y56 855 aa19.94■□□□□ 0.78
TPM4-208ENST00000588410 CNTNAP3BQ96NU0 1288 aa19.94■□□□□ 0.78
TPM4-208ENST00000588410 CAMK1GQ96NX5 476 aa19.94■□□□□ 0.78
TPM4-208ENST00000588410 HEPHQ9BQS7 1158 aa19.94■□□□□ 0.78
TPM4-208ENST00000588410 CNTNAP3Q9BZ76 1288 aa19.94■□□□□ 0.78
TPM4-208ENST00000588410 PREBQ9HCU5 417 aa19.94■□□□□ 0.78
TPM4-208ENST00000588410 MRPL47Q9HD33 250 aaKnown RBP19.94■□□□□ 0.78
TPM4-208ENST00000588410 IFNKQ9P0W0 207 aa19.94■□□□□ 0.78
TPM4-208ENST00000588410 PCDHGB2Q9Y5G2 931 aa19.94■□□□□ 0.78
TPM4-208ENST00000588410 TMEM191CA6NGB0 347 aa19.93■□□□□ 0.78
TPM4-208ENST00000588410 FGF10O15520 208 aaPredicted RBP19.93■□□□□ 0.78
TPM4-208ENST00000588410 LATO43561 262 aa19.93■□□□□ 0.78
TPM4-208ENST00000588410 KDELR3O43731 214 aa19.93■□□□□ 0.78
TPM4-208ENST00000588410 DFNA5O60443 496 aa19.93■□□□□ 0.78
TPM4-208ENST00000588410 LEFTY1O75610 366 aa19.93■□□□□ 0.78
TPM4-208ENST00000588410 CTSKP43235 329 aa19.93■□□□□ 0.78
TPM4-208ENST00000588410 CCT8P50990 548 aa19.93■□□□□ 0.78
TPM4-208ENST00000588410 TPI1P60174 286 aa19.93■□□□□ 0.78
TPM4-208ENST00000588410 ZBED6P86452 979 aa19.93■□□□□ 0.78
TPM4-208ENST00000588410 SHC2P98077 582 aa19.93■□□□□ 0.78
TPM4-208ENST00000588410 TRIP6Q15654 476 aaKnown RBP19.93■□□□□ 0.78
TPM4-208ENST00000588410 NAPEPLDQ6IQ20 393 aa19.93■□□□□ 0.78
TPM4-208ENST00000588410 ERN2Q76MJ5 926 aaKnown RBP19.93■□□□□ 0.78
TPM4-208ENST00000588410 TRIM69Q86WT6 500 aa19.93■□□□□ 0.78
TPM4-208ENST00000588410 SYN2Q92777 582 aaPredicted RBP19.93■□□□□ 0.78
TPM4-208ENST00000588410 ISG20Q96AZ6 181 aaKnown RBP19.93■□□□□ 0.78
TPM4-208ENST00000588410 ARRDC3Q96B67 414 aa19.93■□□□□ 0.78
TPM4-208ENST00000588410 TM6SF2Q9BZW4 377 aa19.93■□□□□ 0.78
TPM4-208ENST00000588410 DONSONQ9NYP3 566 aa19.93■□□□□ 0.78
TPM4-208ENST00000588410 MYO1AQ9UBC5 1043 aa19.93■□□□□ 0.78
TPM4-208ENST00000588410 HECAQ9UBI9 543 aaPredicted RBP19.93■□□□□ 0.78
TPM4-208ENST00000588410 DMTF1Q9Y222 760 aa19.93■□□□□ 0.78
TPM4-208ENST00000588410 ACTL7AQ9Y615 435 aa19.93■□□□□ 0.78
TPM4-208ENST00000588410 PCDH15Q96QU1 1955 aa19.92■□□□□ 0.78
TPM4-208ENST00000588410 SPTBN2O15020 2390 aa19.92■□□□□ 0.78
TPM4-208ENST00000588410 ZSCAN5CA6NGD5 496 aaPredicted RBP19.92■□□□□ 0.78
TPM4-208ENST00000588410 KCNK3O14649 394 aa19.92■□□□□ 0.78
TPM4-208ENST00000588410 BUB1O43683 1085 aa19.92■□□□□ 0.78
TPM4-208ENST00000588410 PRPSAP2O60256 369 aa19.92■□□□□ 0.78
TPM4-208ENST00000588410 RNGTTO60942 597 aaKnown RBP19.92■□□□□ 0.78
TPM4-208ENST00000588410 ZNF821O75541 412 aaPredicted RBP19.92■□□□□ 0.78
TPM4-208ENST00000588410 HTR7P34969 479 aa19.92■□□□□ 0.78
TPM4-208ENST00000588410 PBX1P40424 430 aa19.92■□□□□ 0.78
TPM4-208ENST00000588410 CCNHP51946 323 aaPredicted RBP19.92■□□□□ 0.78
TPM4-208ENST00000588410 YBEYP58557 167 aaPredicted RBP19.92■□□□□ 0.78
TPM4-208ENST00000588410 SETMARQ53H47 684 aaPredicted RBP19.92■□□□□ 0.78
TPM4-208ENST00000588410 KCNT1Q5JUK3 1230 aa19.92■□□□□ 0.78
TPM4-208ENST00000588410 PIP5KL1Q5T9C9 394 aa19.92■□□□□ 0.78
TPM4-208ENST00000588410 LEKR1Q6ZMV7 388 aa19.92■□□□□ 0.78
TPM4-208ENST00000588410 HDAC8Q9BY41 377 aa19.92■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms