RNA–Protein interactions for RNA: ENST00000587945.1

VMP1-206, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-206ENST00000587945 RXRGP48443 463 aa14.65□□□□□ -0.06
VMP1-206ENST00000587945 DNA2P51530 1060 aa14.65□□□□□ -0.06
VMP1-206ENST00000587945 COPB1P53618 953 aaKnown RBP14.65□□□□□ -0.06
VMP1-206ENST00000587945 ARF5P84085 180 aa14.65□□□□□ -0.06
VMP1-206ENST00000587945 GNA12Q03113 381 aa14.65□□□□□ -0.06
VMP1-206ENST00000587945 SYCP1Q15431 976 aa14.65□□□□□ -0.06
VMP1-206ENST00000587945 SMAD1Q15797 465 aaKnown RBP14.65□□□□□ -0.06
VMP1-206ENST00000587945 ZNF284Q2VY69 593 aa14.65□□□□□ -0.06
VMP1-206ENST00000587945 ACBD5Q5T8D3 534 aaPredicted RBP14.65□□□□□ -0.06
VMP1-206ENST00000587945 FAM72AQ5TYM5 149 aa14.65□□□□□ -0.06
VMP1-206ENST00000587945 FAM72DQ6L9T8 149 aa14.65□□□□□ -0.06
VMP1-206ENST00000587945 RWDD4Q6NW29 188 aaKnown RBP14.65□□□□□ -0.06
VMP1-206ENST00000587945 C19orf48Q6RUI8 117 aa14.65□□□□□ -0.06
VMP1-206ENST00000587945 ARCQ7LC44 396 aa14.65□□□□□ -0.06
VMP1-206ENST00000587945 IQCHQ86VS3 1027 aa14.65□□□□□ -0.06
VMP1-206ENST00000587945 FAM72BQ86X60 149 aa14.65□□□□□ -0.06
VMP1-206ENST00000587945 GALNT15Q8N3T1 639 aa14.65□□□□□ -0.06
VMP1-206ENST00000587945 PCMTD1Q96MG8 357 aaPredicted RBP14.65□□□□□ -0.06
VMP1-206ENST00000587945 ERVMER34-1Q9H9K5 563 aa14.65□□□□□ -0.06
VMP1-206ENST00000587945 DYRK4Q9NR20 520 aa14.65□□□□□ -0.06
VMP1-206ENST00000587945 NDFIP2Q9NV92 336 aa14.65□□□□□ -0.06
VMP1-206ENST00000587945 TMEM51Q9NW97 253 aa14.65□□□□□ -0.06
VMP1-206ENST00000587945 IL36AQ9UHA7 158 aa14.65□□□□□ -0.06
VMP1-206ENST00000587945 ZFR2Q9UPR6 939 aaKnown RBP14.65□□□□□ -0.06
VMP1-206ENST00000587945 FCF1Q9Y324 198 aaKnown RBP14.65□□□□□ -0.06
VMP1-206ENST00000587945 PLXNA2O75051 1894 aa14.64□□□□□ -0.07
VMP1-206ENST00000587945 C2CD4BA6NLJ0 364 aa14.64□□□□□ -0.07
VMP1-206ENST00000587945 YKT6O15498 198 aa14.64□□□□□ -0.07
VMP1-206ENST00000587945 PCDH8O95206 1070 aa14.64□□□□□ -0.07
VMP1-206ENST00000587945 TPM2P07951 284 aa14.64□□□□□ -0.07
VMP1-206ENST00000587945 SDC4P31431 198 aa14.64□□□□□ -0.07
VMP1-206ENST00000587945 ADRA1BP35368 520 aa14.64□□□□□ -0.07
VMP1-206ENST00000587945 STAT1P42224 750 aa14.64□□□□□ -0.07
VMP1-206ENST00000587945 RECQLP46063 649 aaPredicted RBP14.64□□□□□ -0.07
VMP1-206ENST00000587945 SERPINH1P50454 418 aaKnown RBP14.64□□□□□ -0.07
VMP1-206ENST00000587945 CLDN2P57739 230 aa14.64□□□□□ -0.07
VMP1-206ENST00000587945 CYP4F3Q08477 520 aa14.64□□□□□ -0.07
VMP1-206ENST00000587945 PTP4A2Q12974 167 aa14.64□□□□□ -0.07
VMP1-206ENST00000587945 CAMK2BQ13554 666 aa14.64□□□□□ -0.07
VMP1-206ENST00000587945 SEL1L3Q68CR1 1132 aa14.64□□□□□ -0.07
VMP1-206ENST00000587945 RETSATQ6NUM9 610 aa14.64□□□□□ -0.07
VMP1-206ENST00000587945 ZNF783Q6ZMS7 281 aa14.64□□□□□ -0.07
VMP1-206ENST00000587945 RBM43Q6ZSC3 357 aaKnown RBP14.64□□□□□ -0.07
VMP1-206ENST00000587945 ERN2Q76MJ5 926 aaKnown RBP14.64□□□□□ -0.07
VMP1-206ENST00000587945 KANSL1Q7Z3B3 1105 aa14.64□□□□□ -0.07
VMP1-206ENST00000587945 HORMAD1Q86X24 394 aa14.64□□□□□ -0.07
VMP1-206ENST00000587945 OXR1Q8N573 874 aa14.64□□□□□ -0.07
VMP1-206ENST00000587945 TMEM145Q8NBT3 493 aa14.64□□□□□ -0.07
VMP1-206ENST00000587945 KLHDC7BQ96G42 594 aa14.64□□□□□ -0.07
VMP1-206ENST00000587945 PPARGC1AQ9UBK2 798 aaKnown RBP14.64□□□□□ -0.07
VMP1-206ENST00000587945 OR12D3Q9UGF7 316 aa14.64□□□□□ -0.07
VMP1-206ENST00000587945 LHX6Q9UPM6 363 aa14.64□□□□□ -0.07
VMP1-206ENST00000587945 RAXQ9Y2V3 346 aa14.64□□□□□ -0.07
VMP1-206ENST00000587945 WASF2Q9Y6W5 498 aa14.64□□□□□ -0.07
VMP1-206ENST00000587945 PKD1L2Q7Z442 2459 aa14.64□□□□□ -0.07
VMP1-206ENST00000587945 LAMA5O15230 3695 aa14.63□□□□□ -0.07
VMP1-206ENST00000587945 MAGEC1O60732 1142 aa14.63□□□□□ -0.07
VMP1-206ENST00000587945 CD160O95971 181 aa14.63□□□□□ -0.07
VMP1-206ENST00000587945 THEGLP0DJG4 465 aa14.63□□□□□ -0.07
VMP1-206ENST00000587945 UNGP13051 313 aaPredicted RBP14.63□□□□□ -0.07
VMP1-206ENST00000587945 GKP32189 559 aa14.63□□□□□ -0.07
VMP1-206ENST00000587945 ANP32AP39687 249 aaKnown RBP14.63□□□□□ -0.07
VMP1-206ENST00000587945 ACADVLP49748 655 aa14.63□□□□□ -0.07
VMP1-206ENST00000587945 HDAC4P56524 1084 aa14.63□□□□□ -0.07
VMP1-206ENST00000587945 OVGP1Q12889 678 aa14.63□□□□□ -0.07
VMP1-206ENST00000587945 ARL13BQ3SXY8 428 aa14.63□□□□□ -0.07
VMP1-206ENST00000587945 CARD16Q5EG05 197 aa14.63□□□□□ -0.07
VMP1-206ENST00000587945 MANEALQ5VSG8 457 aa14.63□□□□□ -0.07
VMP1-206ENST00000587945 SFMBT2Q5VUG0 894 aa14.63□□□□□ -0.07
VMP1-206ENST00000587945 TRIM72Q6ZMU5 477 aa14.63□□□□□ -0.07
VMP1-206ENST00000587945 LEKR1Q6ZMV7 388 aa14.63□□□□□ -0.07
VMP1-206ENST00000587945 NLRP14Q86W24 1093 aa14.63□□□□□ -0.07
VMP1-206ENST00000587945 CCDC185Q8N715 623 aa14.63□□□□□ -0.07
VMP1-206ENST00000587945 HEPHQ9BQS7 1158 aa14.63□□□□□ -0.07
VMP1-206ENST00000587945 HDAC8Q9BY41 377 aa14.63□□□□□ -0.07
VMP1-206ENST00000587945 TM6SF2Q9BZW4 377 aa14.63□□□□□ -0.07
VMP1-206ENST00000587945 ADAM22Q9P0K1 906 aa14.63□□□□□ -0.07
VMP1-206ENST00000587945 DNAI1Q9UI46 699 aa14.63□□□□□ -0.07
VMP1-206ENST00000587945 LGALS16A8MUM7 142 aa14.62□□□□□ -0.07
VMP1-206ENST00000587945 RFPL3O75679 317 aa14.62□□□□□ -0.07
VMP1-206ENST00000587945 LRIG2O94898 1065 aa14.62□□□□□ -0.07
VMP1-206ENST00000587945 PLEKP08567 350 aaPredicted RBP14.62□□□□□ -0.07
VMP1-206ENST00000587945 KRT3P12035 628 aa14.62□□□□□ -0.07
VMP1-206ENST00000587945 HOXB3P14651 431 aaPredicted RBP14.62□□□□□ -0.07
VMP1-206ENST00000587945 AKT2P31751 481 aa14.62□□□□□ -0.07
VMP1-206ENST00000587945 RFC1P35251 1148 aaPredicted RBP14.62□□□□□ -0.07
VMP1-206ENST00000587945 NSFP46459 744 aaKnown RBP14.62□□□□□ -0.07
VMP1-206ENST00000587945 CCNHP51946 323 aaPredicted RBP14.62□□□□□ -0.07
VMP1-206ENST00000587945 UBXN1Q04323 297 aa14.62□□□□□ -0.07
VMP1-206ENST00000587945 SLC20A2Q08357 652 aa14.62□□□□□ -0.07
VMP1-206ENST00000587945 CCDC15Q0P6D6 951 aa14.62□□□□□ -0.07
VMP1-206ENST00000587945 MAPK8IP2Q13387 824 aaPredicted RBP14.62□□□□□ -0.07
VMP1-206ENST00000587945 CLEC16AQ2KHT3 1053 aa14.62□□□□□ -0.07
VMP1-206ENST00000587945 NEK5Q6P3R8 708 aa14.62□□□□□ -0.07
VMP1-206ENST00000587945 SASS6Q6UVJ0 657 aa14.62□□□□□ -0.07
VMP1-206ENST00000587945 PCDH20Q8N6Y1 951 aaKnown RBP14.62□□□□□ -0.07
VMP1-206ENST00000587945 NEK11Q8NG66 645 aa14.62□□□□□ -0.07
VMP1-206ENST00000587945 OR13H1Q8NG92 308 aa14.62□□□□□ -0.07
VMP1-206ENST00000587945 OR6K2Q8NGY2 324 aa14.62□□□□□ -0.07
VMP1-206ENST00000587945 FAM172AQ8WUF8 416 aa14.62□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms