RNA–Protein interactions for RNA: ENST00000586245.5

VMP1-203, Transcript of vacuole membrane protein 1, humanhuman

TSL 4

Gene VMP1, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-203ENST00000586245 URI1O94763 535 aaPredicted RBP13.87□□□□□ -0.19
VMP1-203ENST00000586245 TMCC1O94876 653 aa13.87□□□□□ -0.19
VMP1-203ENST00000586245 EPHX1P07099 455 aa13.87□□□□□ -0.19
VMP1-203ENST00000586245 DCNP07585 359 aaKnown RBP13.87□□□□□ -0.19
VMP1-203ENST00000586245 AOC1P19801 751 aa13.87□□□□□ -0.19
VMP1-203ENST00000586245 CLCN5P51795 746 aa13.87□□□□□ -0.19
VMP1-203ENST00000586245 FZD5Q13467 585 aa13.87□□□□□ -0.19
VMP1-203ENST00000586245 HNRNPDQ14103 355 aaKnown RBP13.87□□□□□ -0.19
VMP1-203ENST00000586245 ZNF235Q14590 738 aa13.87□□□□□ -0.19
VMP1-203ENST00000586245 STARD3Q14849 445 aa13.87□□□□□ -0.19
VMP1-203ENST00000586245 PRKD1Q15139 912 aaPredicted RBP13.87□□□□□ -0.19
VMP1-203ENST00000586245 SLC45A4Q5BKX6 768 aa13.87□□□□□ -0.19
VMP1-203ENST00000586245 MARC1Q5VT66 337 aa13.87□□□□□ -0.19
VMP1-203ENST00000586245 HEATR6Q6AI08 1181 aaKnown RBP13.87□□□□□ -0.19
VMP1-203ENST00000586245 C22orf39Q6P5X5 142 aa13.87□□□□□ -0.19
VMP1-203ENST00000586245 PCDH20Q8N6Y1 951 aaKnown RBP13.87□□□□□ -0.19
VMP1-203ENST00000586245 TXNDC5Q8NBS9 432 aaKnown RBP13.87□□□□□ -0.19
VMP1-203ENST00000586245 LRRN4Q8WUT4 740 aa13.87□□□□□ -0.19
VMP1-203ENST00000586245 PBXIP1Q96AQ6 731 aa13.87□□□□□ -0.19
VMP1-203ENST00000586245 MYO19Q96H55 970 aa13.87□□□□□ -0.19
VMP1-203ENST00000586245 CCDC114Q96M63 670 aa13.87□□□□□ -0.19
VMP1-203ENST00000586245 ACOX2Q99424 681 aa13.87□□□□□ -0.19
VMP1-203ENST00000586245 IER2Q9BTL4 223 aa13.87□□□□□ -0.19
VMP1-203ENST00000586245 CHRDQ9H2X0 955 aa13.87□□□□□ -0.19
VMP1-203ENST00000586245 TMEM245Q9H330 911 aa13.87□□□□□ -0.19
VMP1-203ENST00000586245 SEPT10Q9P0V9 454 aa13.87□□□□□ -0.19
VMP1-203ENST00000586245 SEPT3Q9UH03 358 aa13.87□□□□□ -0.19
VMP1-203ENST00000586245 MMP17Q9ULZ9 603 aa13.87□□□□□ -0.19
VMP1-203ENST00000586245 FCF1Q9Y324 198 aaKnown RBP13.87□□□□□ -0.19
VMP1-203ENST00000586245 FARP1Q9Y4F1 1045 aaPredicted RBP13.87□□□□□ -0.19
VMP1-203ENST00000586245 NCOR1O75376 2440 aa13.86□□□□□ -0.19
VMP1-203ENST00000586245 EDDM13A0A1B0GTR0 161 aa13.86□□□□□ -0.19
VMP1-203ENST00000586245 WASH3PC4AMC7 463 aa13.86□□□□□ -0.19
VMP1-203ENST00000586245 KCNK1O00180 336 aa13.86□□□□□ -0.19
VMP1-203ENST00000586245 KRIT1O00522 736 aa13.86□□□□□ -0.19
VMP1-203ENST00000586245 SMAD6O43541 496 aaKnown RBP13.86□□□□□ -0.19
VMP1-203ENST00000586245 LIASO43766 372 aa13.86□□□□□ -0.19
VMP1-203ENST00000586245 SYNCRIPO60506 623 aaKnown RBP13.86□□□□□ -0.19
VMP1-203ENST00000586245 CD160O95971 181 aa13.86□□□□□ -0.19
VMP1-203ENST00000586245 HLA-EP13747 358 aa13.86□□□□□ -0.19
VMP1-203ENST00000586245 CCNB1P14635 433 aa13.86□□□□□ -0.19
VMP1-203ENST00000586245 HOXB2P14652 356 aa13.86□□□□□ -0.19
VMP1-203ENST00000586245 PRKCHP24723 683 aa13.86□□□□□ -0.19
VMP1-203ENST00000586245 RECQLP46063 649 aaPredicted RBP13.86□□□□□ -0.19
VMP1-203ENST00000586245 RHOAP61586 193 aa13.86□□□□□ -0.19
VMP1-203ENST00000586245 ENPP2Q13822 863 aa13.86□□□□□ -0.19
VMP1-203ENST00000586245 BYSLQ13895 437 aaKnown RBP13.86□□□□□ -0.19
VMP1-203ENST00000586245 CYTH1Q15438 398 aa13.86□□□□□ -0.19
VMP1-203ENST00000586245 CCNG2Q16589 344 aa13.86□□□□□ -0.19
VMP1-203ENST00000586245 HNRNPA1L2Q32P51 320 aaKnown RBP13.86□□□□□ -0.19
VMP1-203ENST00000586245 B4GALNT4Q76KP1 1039 aa13.86□□□□□ -0.19
VMP1-203ENST00000586245 BMP8AQ7Z5Y6 402 aa13.86□□□□□ -0.19
VMP1-203ENST00000586245 CREG2Q8IUH2 290 aa13.86□□□□□ -0.19
VMP1-203ENST00000586245 ZNF366Q8N895 744 aa13.86□□□□□ -0.19
VMP1-203ENST00000586245 FRS2Q8WU20 508 aa13.86□□□□□ -0.19
VMP1-203ENST00000586245 C1orf54Q8WWF1 131 aa13.86□□□□□ -0.19
VMP1-203ENST00000586245 ATG4AQ8WYN0 398 aa13.86□□□□□ -0.19
VMP1-203ENST00000586245 MAML1Q92585 1016 aa13.86□□□□□ -0.19
VMP1-203ENST00000586245 ISG20Q96AZ6 181 aaKnown RBP13.86□□□□□ -0.19
VMP1-203ENST00000586245 GABRG3Q99928 467 aa13.86□□□□□ -0.19
VMP1-203ENST00000586245 AP1M1Q9BXS5 423 aa13.86□□□□□ -0.19
VMP1-203ENST00000586245 EPHX3Q9H6B9 360 aa13.86□□□□□ -0.19
VMP1-203ENST00000586245 SMARCAL1Q9NZC9 954 aa13.86□□□□□ -0.19
VMP1-203ENST00000586245 NYNRINQ9P2P1 1898 aaKnown RBP13.86□□□□□ -0.19
VMP1-203ENST00000586245 NUP205Q92621 2012 aa13.86□□□□□ -0.19
VMP1-203ENST00000586245 BDP1A6H8Y1 2624 aa13.86□□□□□ -0.19
VMP1-203ENST00000586245 BCLAF3A2AJT9 711 aaKnown RBP13.85□□□□□ -0.19
VMP1-203ENST00000586245 TARSL2A2RTX5 802 aaKnown RBP13.85□□□□□ -0.19
VMP1-203ENST00000586245 CFAP69A5D8W1 941 aa13.85□□□□□ -0.19
VMP1-203ENST00000586245 SGK1O00141 431 aa13.85□□□□□ -0.19
VMP1-203ENST00000586245 BNIP3LO60238 219 aa13.85□□□□□ -0.19
VMP1-203ENST00000586245 ZNF500O60304 480 aaPredicted RBP13.85□□□□□ -0.19
VMP1-203ENST00000586245 STK10O94804 968 aaKnown RBP13.85□□□□□ -0.19
VMP1-203ENST00000586245 PEX11BO96011 259 aa13.85□□□□□ -0.19
VMP1-203ENST00000586245 JCHAINP01591 159 aa13.85□□□□□ -0.19
VMP1-203ENST00000586245 CHRM1P11229 460 aaPredicted RBP13.85□□□□□ -0.19
VMP1-203ENST00000586245 VAV1P15498 845 aa13.85□□□□□ -0.19
VMP1-203ENST00000586245 RBL1P28749 1068 aa13.85□□□□□ -0.19
VMP1-203ENST00000586245 HSPA9P38646 679 aaKnown RBP13.85□□□□□ -0.19
VMP1-203ENST00000586245 MMP13P45452 471 aa13.85□□□□□ -0.19
VMP1-203ENST00000586245 SNRPD1P62314 119 aaKnown RBP13.85□□□□□ -0.19
VMP1-203ENST00000586245 IFI35P80217 286 aaPredicted RBP13.85□□□□□ -0.19
VMP1-203ENST00000586245 SLC10A7Q0GE19 358 aa13.85□□□□□ -0.19
VMP1-203ENST00000586245 SNX1Q13596 522 aa13.85□□□□□ -0.19
VMP1-203ENST00000586245 TUBB2AQ13885 445 aa13.85□□□□□ -0.19
VMP1-203ENST00000586245 SIX1Q15475 284 aaPredicted RBP13.85□□□□□ -0.19
VMP1-203ENST00000586245 PKN3Q6P5Z2 889 aa13.85□□□□□ -0.19
VMP1-203ENST00000586245 Q6ZVU0 165 aa13.85□□□□□ -0.19
VMP1-203ENST00000586245 SYT13Q7L8C5 426 aa13.85□□□□□ -0.19
VMP1-203ENST00000586245 SPEM1Q8N4L4 309 aa13.85□□□□□ -0.19
VMP1-203ENST00000586245 TEX26Q8N6G2 289 aa13.85□□□□□ -0.19
VMP1-203ENST00000586245 SLC35B2Q8TB61 432 aa13.85□□□□□ -0.19
VMP1-203ENST00000586245 HTR3CQ8WXA8 447 aa13.85□□□□□ -0.19
VMP1-203ENST00000586245 TUBB2BQ9BVA1 445 aa13.85□□□□□ -0.19
VMP1-203ENST00000586245 TM6SF2Q9BZW4 377 aa13.85□□□□□ -0.19
VMP1-203ENST00000586245 TNKS2Q9H2K2 1166 aa13.85□□□□□ -0.19
VMP1-203ENST00000586245 RBM22Q9NW64 420 aaKnown RBP eCLIP13.85□□□□□ -0.19
VMP1-203ENST00000586245 AMACRQ9UHK6 382 aa13.85□□□□□ -0.19
VMP1-203ENST00000586245 DNPEPQ9ULA0 475 aa13.85□□□□□ -0.19
VMP1-203ENST00000586245 ZNF148Q9UQR1 794 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms