RNA–Protein interactions for RNA: ENST00000584472.5

CSNK1D-223, Transcript of casein kinase 1 delta, humanhuman

TSL 4

Gene CSNK1D, Length 586 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-223ENST00000584472 RHOCP08134 193 aa16.33■□□□□ 0.2
CSNK1D-223ENST00000584472 SRPRAP08240 638 aaKnown RBP16.33■□□□□ 0.2
CSNK1D-223ENST00000584472 ZFXP17010 805 aaPredicted RBP16.33■□□□□ 0.2
CSNK1D-223ENST00000584472 TCP1P17987 556 aaKnown RBP16.33■□□□□ 0.2
CSNK1D-223ENST00000584472 PRKCHP24723 683 aa16.33■□□□□ 0.2
CSNK1D-223ENST00000584472 ECT2LQ008S8 904 aa16.33■□□□□ 0.2
CSNK1D-223ENST00000584472 CSRP2Q16527 193 aa16.33■□□□□ 0.2
CSNK1D-223ENST00000584472 C6orf118Q5T5N4 469 aa16.33■□□□□ 0.2
CSNK1D-223ENST00000584472 KIAA1211LQ6NV74 962 aa16.33■□□□□ 0.2
CSNK1D-223ENST00000584472 UMODL1-AS1Q8N2C9 162 aa16.33■□□□□ 0.2
CSNK1D-223ENST00000584472 LZTR1Q8N653 840 aa16.33■□□□□ 0.2
CSNK1D-223ENST00000584472 NPWQ8N729 165 aa16.33■□□□□ 0.2
CSNK1D-223ENST00000584472 PLD5Q8N7P1 536 aa16.33■□□□□ 0.2
CSNK1D-223ENST00000584472 OR52K2Q8NGK3 314 aa16.33■□□□□ 0.2
CSNK1D-223ENST00000584472 ALG14Q96F25 216 aa16.33■□□□□ 0.2
CSNK1D-223ENST00000584472 NOL6Q9H6R4 1146 aaKnown RBP16.33■□□□□ 0.2
CSNK1D-223ENST00000584472 PCDHGA5Q9Y5G8 931 aa16.33■□□□□ 0.2
CSNK1D-223ENST00000584472 SAR1BQ9Y6B6 198 aa16.33■□□□□ 0.2
CSNK1D-223ENST00000584472 SPAG17Q6Q759 2223 aa16.33■□□□□ 0.2
CSNK1D-223ENST00000584472 ILVBLA1L0T0 632 aa16.32■□□□□ 0.2
CSNK1D-223ENST00000584472 CEP104O60308 925 aa16.32■□□□□ 0.2
CSNK1D-223ENST00000584472 RPP40O75818 363 aaKnown RBP16.32■□□□□ 0.2
CSNK1D-223ENST00000584472 TJP3O95049 919 aa16.32■□□□□ 0.2
CSNK1D-223ENST00000584472 MZF1P28698 734 aaPredicted RBP16.32■□□□□ 0.2
CSNK1D-223ENST00000584472 SERPINB6P35237 376 aa16.32■□□□□ 0.2
CSNK1D-223ENST00000584472 VASPP50552 380 aaPredicted RBP16.32■□□□□ 0.2
CSNK1D-223ENST00000584472 NDST2P52849 883 aa16.32■□□□□ 0.2
CSNK1D-223ENST00000584472 ST8SIA6P61647 398 aa16.32■□□□□ 0.2
CSNK1D-223ENST00000584472 DYNLT1P63172 113 aa16.32■□□□□ 0.2
CSNK1D-223ENST00000584472 KLF1Q13351 362 aaPredicted RBP16.32■□□□□ 0.2
CSNK1D-223ENST00000584472 CAMK2GQ13555 558 aaPredicted RBP16.32■□□□□ 0.2
CSNK1D-223ENST00000584472 RNF219Q5W0B1 726 aaPredicted RBP16.32■□□□□ 0.2
CSNK1D-223ENST00000584472 AFMIDQ63HM1 303 aa16.32■□□□□ 0.2
CSNK1D-223ENST00000584472 PRR23BQ6ZRT6 265 aa16.32■□□□□ 0.2
CSNK1D-223ENST00000584472 BBS12Q6ZW61 710 aa16.32■□□□□ 0.2
CSNK1D-223ENST00000584472 SLC13A5Q86YT5 568 aaPredicted RBP16.32■□□□□ 0.2
CSNK1D-223ENST00000584472 APCDD1Q8J025 514 aa16.32■□□□□ 0.2
CSNK1D-223ENST00000584472 RASGEF1CQ8N431 466 aa16.32■□□□□ 0.2
CSNK1D-223ENST00000584472 COG1Q8WTW3 980 aa16.32■□□□□ 0.2
CSNK1D-223ENST00000584472 HMGB4Q8WW32 186 aa16.32■□□□□ 0.2
CSNK1D-223ENST00000584472 MRGPRX3Q96LB0 322 aa16.32■□□□□ 0.2
CSNK1D-223ENST00000584472 C2orf49Q9BVC5 232 aaPredicted RBP16.32■□□□□ 0.2
CSNK1D-223ENST00000584472 MUC3BQ9H195 1237 aa16.32■□□□□ 0.2
CSNK1D-223ENST00000584472 LRRC19Q9H756 370 aa16.32■□□□□ 0.2
CSNK1D-223ENST00000584472 FBRSQ9HAH7 460 aa16.32■□□□□ 0.2
CSNK1D-223ENST00000584472 BCCIPQ9P287 314 aaKnown RBP eCLIP16.32■□□□□ 0.28e-7■■□□□ 14.4
CSNK1D-223ENST00000584472 VPS28Q9UK41 221 aa16.32■□□□□ 0.2
CSNK1D-223ENST00000584472 ERVW-1Q9UQF0 538 aa16.32■□□□□ 0.2
CSNK1D-223ENST00000584472 PLXND1Q9Y4D7 1925 aa16.32■□□□□ 0.2
CSNK1D-223ENST00000584472 SHROOM3Q8TF72 1996 aa16.31■□□□□ 0.2
CSNK1D-223ENST00000584472 ZNF185O15231 689 aa16.31■□□□□ 0.2
CSNK1D-223ENST00000584472 MFSD11O43934 449 aa16.31■□□□□ 0.2
CSNK1D-223ENST00000584472 RAMP2O60895 175 aa16.31■□□□□ 0.2
CSNK1D-223ENST00000584472 EPHX1P07099 455 aa16.31■□□□□ 0.2
CSNK1D-223ENST00000584472 C7P10643 843 aa16.31■□□□□ 0.2
CSNK1D-223ENST00000584472 GABRG2P18507 467 aa16.31■□□□□ 0.2
CSNK1D-223ENST00000584472 TGM2P21980 687 aa16.31■□□□□ 0.2
CSNK1D-223ENST00000584472 ETFBP38117 255 aa16.31■□□□□ 0.2
CSNK1D-223ENST00000584472 YBEYP58557 167 aaPredicted RBP16.31■□□□□ 0.2
CSNK1D-223ENST00000584472 GNA12Q03113 381 aa16.31■□□□□ 0.2
CSNK1D-223ENST00000584472 GBE1Q04446 702 aa16.31■□□□□ 0.2
CSNK1D-223ENST00000584472 BYSLQ13895 437 aaKnown RBP16.31■□□□□ 0.2
CSNK1D-223ENST00000584472 USP39Q53GS9 565 aaKnown RBP16.31■□□□□ 0.2
CSNK1D-223ENST00000584472 CEP68Q76N32 757 aa16.31■□□□□ 0.2
CSNK1D-223ENST00000584472 ARHGAP12Q8IWW6 846 aa16.31■□□□□ 0.2
CSNK1D-223ENST00000584472 FAM160A2Q8N612 972 aaPredicted RBP16.31■□□□□ 0.2
CSNK1D-223ENST00000584472 DCAF4L2Q8NA75 395 aa16.31■□□□□ 0.2
CSNK1D-223ENST00000584472 MYO19Q96H55 970 aa16.31■□□□□ 0.2
CSNK1D-223ENST00000584472 RTKNQ9BST9 563 aa16.31■□□□□ 0.2
CSNK1D-223ENST00000584472 SLC39A8Q9C0K1 460 aa16.31■□□□□ 0.2
CSNK1D-223ENST00000584472 PARD6AQ9NPB6 346 aa16.31■□□□□ 0.2
CSNK1D-223ENST00000584472 SEMA4GQ9NTN9 838 aa16.31■□□□□ 0.2
CSNK1D-223ENST00000584472 RAD54BQ9Y620 910 aa16.31■□□□□ 0.2
CSNK1D-223ENST00000584472 A0A0D9SEW6 157 aa16.3■□□□□ 0.2
CSNK1D-223ENST00000584472 TCRBV7S2A1N4TA0A589 114 aa16.3■□□□□ 0.2
CSNK1D-223ENST00000584472 NDUFV2P19404 249 aa16.3■□□□□ 0.2
CSNK1D-223ENST00000584472 CTSOP43234 321 aaPredicted RBP16.3■□□□□ 0.2
CSNK1D-223ENST00000584472 SLC10A2Q12908 348 aaPredicted RBP16.3■□□□□ 0.2
CSNK1D-223ENST00000584472 POLD3Q15054 466 aaPredicted RBP16.3■□□□□ 0.2
CSNK1D-223ENST00000584472 HNRNPA1L2Q32P51 320 aaKnown RBP16.3■□□□□ 0.2
CSNK1D-223ENST00000584472 PARP15Q460N3 678 aa16.3■□□□□ 0.2
CSNK1D-223ENST00000584472 NPNTQ6UXI9 565 aa16.3■□□□□ 0.2
CSNK1D-223ENST00000584472 DGLUCYQ7Z3D6 616 aa16.3■□□□□ 0.2
CSNK1D-223ENST00000584472 TP53INP2Q8IXH6 220 aa16.3■□□□□ 0.2
CSNK1D-223ENST00000584472 NETO2Q8NC67 525 aa16.3■□□□□ 0.2
CSNK1D-223ENST00000584472 NETO1Q8TDF5 533 aa16.3■□□□□ 0.2
CSNK1D-223ENST00000584472 ZNF592Q92610 1267 aa16.3■□□□□ 0.2
CSNK1D-223ENST00000584472 ARHGEF2Q92974 986 aaKnown RBP16.3■□□□□ 0.2
CSNK1D-223ENST00000584472 CELF6Q96J87 481 aaKnown RBP16.3■□□□□ 0.2
CSNK1D-223ENST00000584472 MS4A14Q96JA4 679 aa16.3■□□□□ 0.2
CSNK1D-223ENST00000584472 MRGPRX1Q96LB2 322 aa16.3■□□□□ 0.2
CSNK1D-223ENST00000584472 TPSD1Q9BZJ3 242 aa16.3■□□□□ 0.2
CSNK1D-223ENST00000584472 MAGEH1Q9H213 219 aa16.3■□□□□ 0.2
CSNK1D-223ENST00000584472 DTLQ9NZJ0 730 aa16.3■□□□□ 0.2
CSNK1D-223ENST00000584472 SUN2Q9UH99 717 aa16.3■□□□□ 0.2
CSNK1D-223ENST00000584472 TTC7AQ9ULT0 858 aaPredicted RBP16.3■□□□□ 0.2
CSNK1D-223ENST00000584472 HEY1Q9Y5J3 304 aa16.3■□□□□ 0.2
CSNK1D-223ENST00000584472 CXorf51AA0A1B0GTR3 108 aa16.29■□□□□ 0.2
CSNK1D-223ENST00000584472 RASA4BC9J798 803 aa16.29■□□□□ 0.2
CSNK1D-223ENST00000584472 APOC4-APOC2K7ER74 178 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms