RNA–Protein interactions for RNA: ENST00000584083.5

SS18-224, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 4

Gene SS18, Length 663 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-224ENST00000584083 CEP44Q9C0F1 390 aa20.85■□□□□ 0.93
SS18-224ENST00000584083 ISCUQ9H1K1 167 aa20.85■□□□□ 0.93
SS18-224ENST00000584083 SLC32A1Q9H598 525 aa20.85■□□□□ 0.93
SS18-224ENST00000584083 CATSPERBQ9H7T0 1116 aa20.85■□□□□ 0.93
SS18-224ENST00000584083 MRPL47Q9HD33 250 aaKnown RBP20.85■□□□□ 0.93
SS18-224ENST00000584083 OSGEPQ9NPF4 335 aa20.85■□□□□ 0.93
SS18-224ENST00000584083 DNAAF2Q9NVR5 837 aaKnown RBP20.85■□□□□ 0.93
SS18-224ENST00000584083 GPATCH2LQ9NWQ4 482 aa20.85■□□□□ 0.93
SS18-224ENST00000584083 PCSK1NQ9UHG2 260 aa20.85■□□□□ 0.93
SS18-224ENST00000584083 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP20.85■□□□□ 0.932e-6■■□□□ 14.5
SS18-224ENST00000584083 NCOR2Q9Y618 2525 aa20.85■□□□□ 0.93
SS18-224ENST00000584083 PCNX2A6NKB5 2137 aa20.84■□□□□ 0.93
SS18-224ENST00000584083 A0A1W2PPC4 97 aa20.84■□□□□ 0.93
SS18-224ENST00000584083 SLC7A4O43246 635 aa20.84■□□□□ 0.93
SS18-224ENST00000584083 PRNPP04156 253 aa20.84■□□□□ 0.93
SS18-224ENST00000584083 GYPCP04921 128 aa20.84■□□□□ 0.93
SS18-224ENST00000584083 CTSLP07711 333 aa20.84■□□□□ 0.93
SS18-224ENST00000584083 CCR5P51681 352 aa20.84■□□□□ 0.93
SS18-224ENST00000584083 GEMIN4P57678 1058 aaKnown RBP20.84■□□□□ 0.93
SS18-224ENST00000584083 ARSIQ5FYB1 569 aa20.84■□□□□ 0.93
SS18-224ENST00000584083 IL27RAQ6UWB1 636 aa20.84■□□□□ 0.93
SS18-224ENST00000584083 DPY19L3Q6ZPD9 716 aa20.84■□□□□ 0.93
SS18-224ENST00000584083 PCDH20Q8N6Y1 951 aaKnown RBP20.84■□□□□ 0.93
SS18-224ENST00000584083 TMIEQ8NEW7 156 aa20.84■□□□□ 0.93
SS18-224ENST00000584083 GRIN3AQ8TCU5 1115 aa20.84■□□□□ 0.93
SS18-224ENST00000584083 TRIM7Q9C029 511 aa20.84■□□□□ 0.93
SS18-224ENST00000584083 DHX35Q9H5Z1 703 aaKnown RBP20.84■□□□□ 0.93
SS18-224ENST00000584083 GAREM1Q9H706 876 aa20.84■□□□□ 0.93
SS18-224ENST00000584083 DYRK4Q9NR20 520 aa20.84■□□□□ 0.93
SS18-224ENST00000584083 IL36AQ9UHA7 158 aa20.84■□□□□ 0.93
SS18-224ENST00000584083 AP4E1Q9UPM8 1137 aa20.84■□□□□ 0.93
SS18-224ENST00000584083 FCF1Q9Y324 198 aaKnown RBP20.84■□□□□ 0.93
SS18-224ENST00000584083 ACTL7AQ9Y615 435 aa20.84■□□□□ 0.93
SS18-224ENST00000584083 DOCK9Q9BZ29 2069 aa20.84■□□□□ 0.93
SS18-224ENST00000584083 TMEM131Q92545 1883 aa20.84■□□□□ 0.93
SS18-224ENST00000584083 CBFA2T2O43439 604 aa20.83■□□□□ 0.93
SS18-224ENST00000584083 CER1O95813 267 aa20.83■□□□□ 0.93
SS18-224ENST00000584083 CEACAM1P13688 526 aa20.83■□□□□ 0.93
SS18-224ENST00000584083 GRIA4P48058 902 aa20.83■□□□□ 0.93
SS18-224ENST00000584083 TPI1P60174 286 aa20.83■□□□□ 0.93
SS18-224ENST00000584083 BNC1Q01954 994 aa20.83■□□□□ 0.93
SS18-224ENST00000584083 ZNF252P-AS1Q0IIN9 211 aa20.83■□□□□ 0.93
SS18-224ENST00000584083 CCDC15Q0P6D6 951 aa20.83■□□□□ 0.93
SS18-224ENST00000584083 LAYNQ6UX15 382 aa20.83■□□□□ 0.93
SS18-224ENST00000584083 LEKR1Q6ZMV7 388 aa20.83■□□□□ 0.93
SS18-224ENST00000584083 RYBPQ8N488 228 aaPredicted RBP20.83■□□□□ 0.93
SS18-224ENST00000584083 FNIP1Q8TF40 1166 aa20.83■□□□□ 0.93
SS18-224ENST00000584083 ORAI3Q9BRQ5 295 aa20.83■□□□□ 0.93
SS18-224ENST00000584083 KDM4CQ9H3R0 1056 aa20.83■□□□□ 0.93
SS18-224ENST00000584083 TP53BP1Q12888 1972 aaPredicted RBP20.83■□□□□ 0.92
SS18-224ENST00000584083 PLRG1O43660 514 aaKnown RBP20.82■□□□□ 0.92
SS18-224ENST00000584083 KDELR3O43731 214 aa20.82■□□□□ 0.92
SS18-224ENST00000584083 PRPSAP2O60256 369 aa20.82■□□□□ 0.92
SS18-224ENST00000584083 ZNF821O75541 412 aaPredicted RBP20.82■□□□□ 0.92
SS18-224ENST00000584083 CASP14P31944 242 aa20.82■□□□□ 0.92
SS18-224ENST00000584083 RACK1P63244 317 aaKnown RBP20.82■□□□□ 0.92
SS18-224ENST00000584083 SLC14A1Q13336 389 aa20.82■□□□□ 0.92
SS18-224ENST00000584083 KIF19Q2TAC6 998 aa20.82■□□□□ 0.92
SS18-224ENST00000584083 HLA-BQ31612 363 aa20.82■□□□□ 0.92
SS18-224ENST00000584083 CARD16Q5EG05 197 aa20.82■□□□□ 0.92
SS18-224ENST00000584083 ERMARDQ5T6L9 678 aa20.82■□□□□ 0.92
SS18-224ENST00000584083 AGBL4Q5VU57 503 aa20.82■□□□□ 0.92
SS18-224ENST00000584083 PRPF39Q86UA1 669 aaKnown RBP20.82■□□□□ 0.92
SS18-224ENST00000584083 ARFGAP1Q8N6T3 406 aa20.82■□□□□ 0.92
SS18-224ENST00000584083 RNF214Q8ND24 703 aa20.82■□□□□ 0.92
SS18-224ENST00000584083 FAM131CQ96AQ9 280 aa20.82■□□□□ 0.92
SS18-224ENST00000584083 SLC6A18Q96N87 628 aa20.82■□□□□ 0.92
SS18-224ENST00000584083 TM6SF2Q9BZW4 377 aa20.82■□□□□ 0.92
SS18-224ENST00000584083 IL21RQ9HBE5 538 aa20.82■□□□□ 0.92
SS18-224ENST00000584083 AASDHPPTQ9NRN7 309 aa20.82■□□□□ 0.92
SS18-224ENST00000584083 TPX2Q9ULW0 747 aaKnown RBP20.82■□□□□ 0.92
SS18-224ENST00000584083 ANKRD6Q9Y2G4 727 aa20.82■□□□□ 0.92
SS18-224ENST00000584083 SNX11Q9Y5W9 270 aa20.82■□□□□ 0.92
SS18-224ENST00000584083 A0A087X0T9 212 aa20.81■□□□□ 0.92
SS18-224ENST00000584083 CXorf51AA0A1B0GTR3 108 aa20.81■□□□□ 0.92
SS18-224ENST00000584083 ZSCAN5CA6NGD5 496 aaPredicted RBP20.81■□□□□ 0.92
SS18-224ENST00000584083 UPK3BL1B0FP48 263 aa20.81■□□□□ 0.92
SS18-224ENST00000584083 UPK3BL2E5RIL1 263 aa20.81■□□□□ 0.92
SS18-224ENST00000584083 FGF10O15520 208 aaPredicted RBP20.81■□□□□ 0.92
SS18-224ENST00000584083 BUB1O43683 1085 aa20.81■□□□□ 0.92
SS18-224ENST00000584083 LEFTY1O75610 366 aa20.81■□□□□ 0.92
SS18-224ENST00000584083 GJB3O75712 270 aa20.81■□□□□ 0.92
SS18-224ENST00000584083 CD160O95971 181 aa20.81■□□□□ 0.92
SS18-224ENST00000584083 FAM228BP0C875 321 aa20.81■□□□□ 0.92
SS18-224ENST00000584083 CD59P13987 128 aa20.81■□□□□ 0.92
SS18-224ENST00000584083 MIPP30301 263 aa20.81■□□□□ 0.92
SS18-224ENST00000584083 MAT2AP31153 395 aaKnown RBP20.81■□□□□ 0.92
SS18-224ENST00000584083 HTR7P34969 479 aa20.81■□□□□ 0.92
SS18-224ENST00000584083 CCNHP51946 323 aaPredicted RBP20.81■□□□□ 0.92
SS18-224ENST00000584083 C21orf59P57076 290 aa20.81■□□□□ 0.92
SS18-224ENST00000584083 YBEYP58557 167 aaPredicted RBP20.81■□□□□ 0.92
SS18-224ENST00000584083 PPP2CBP62714 309 aa20.81■□□□□ 0.92
SS18-224ENST00000584083 PPP2CAP67775 309 aa20.81■□□□□ 0.92
SS18-224ENST00000584083 PIP4P1Q86T03 277 aa20.81■□□□□ 0.92
SS18-224ENST00000584083 ISG20Q96AZ6 181 aaKnown RBP20.81■□□□□ 0.92
SS18-224ENST00000584083 ARRDC3Q96B67 414 aa20.81■□□□□ 0.92
SS18-224ENST00000584083 PPP1R16AQ96I34 528 aa20.81■□□□□ 0.92
SS18-224ENST00000584083 SERAC1Q96JX3 654 aa20.81■□□□□ 0.92
SS18-224ENST00000584083 PEBP4Q96S96 227 aa20.81■□□□□ 0.92
SS18-224ENST00000584083 NCAPGQ9BPX3 1015 aa20.81■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms