RNA–Protein interactions for RNA: ENST00000583282.5

GGA3-216, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 4

Gene GGA3, Length 550 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-216ENST00000583282 FAM182AQ5T1J6 154 aa14.28□□□□□ -0.12
GGA3-216ENST00000583282 ATXN7L2Q5T6C5 722 aaPredicted RBP14.28□□□□□ -0.12
GGA3-216ENST00000583282 TMCO4Q5TGY1 634 aa14.28□□□□□ -0.12
GGA3-216ENST00000583282 HEATR6Q6AI08 1181 aaKnown RBP14.28□□□□□ -0.12
GGA3-216ENST00000583282 KIAA1324Q6UXG2 1013 aaKnown RBP14.28□□□□□ -0.12
GGA3-216ENST00000583282 ZC3H18Q86VM9 953 aaKnown RBP14.28□□□□□ -0.12
GGA3-216ENST00000583282 STK40Q8N2I9 435 aa14.28□□□□□ -0.12
GGA3-216ENST00000583282 RYBPQ8N488 228 aaPredicted RBP14.28□□□□□ -0.12
GGA3-216ENST00000583282 GRIN3AQ8TCU5 1115 aa14.28□□□□□ -0.12
GGA3-216ENST00000583282 FRS2Q8WU20 508 aa14.28□□□□□ -0.12
GGA3-216ENST00000583282 P3H4Q92791 437 aa14.28□□□□□ -0.12
GGA3-216ENST00000583282 HDAC11Q96DB2 347 aa14.28□□□□□ -0.12
GGA3-216ENST00000583282 C16orf45Q96MC5 204 aaPredicted RBP14.28□□□□□ -0.12
GGA3-216ENST00000583282 OLFM3Q96PB7 478 aa14.28□□□□□ -0.12
GGA3-216ENST00000583282 LGMNQ99538 433 aa14.28□□□□□ -0.12
GGA3-216ENST00000583282 CARD9Q9H257 536 aa14.28□□□□□ -0.12
GGA3-216ENST00000583282 POLMQ9NP87 494 aaPredicted RBP14.28□□□□□ -0.12
GGA3-216ENST00000583282 PRMT8Q9NR22 394 aaPredicted RBP14.28□□□□□ -0.12
GGA3-216ENST00000583282 SEPT10Q9P0V9 454 aa14.28□□□□□ -0.12
GGA3-216ENST00000583282 ANKRD36A6QL64 1941 aa14.27□□□□□ -0.12
GGA3-216ENST00000583282 APOC4-APOC2K7ER74 178 aa14.27□□□□□ -0.13
GGA3-216ENST00000583282 NEBLO76041 1014 aa14.27□□□□□ -0.13
GGA3-216ENST00000583282 APOC2P02655 101 aa14.27□□□□□ -0.13
GGA3-216ENST00000583282 NDUFV2P19404 249 aa14.27□□□□□ -0.13
GGA3-216ENST00000583282 RECQLP46063 649 aaPredicted RBP14.27□□□□□ -0.13
GGA3-216ENST00000583282 PSMD8P48556 350 aa14.27□□□□□ -0.13
GGA3-216ENST00000583282 DGKEP52429 567 aa14.27□□□□□ -0.13
GGA3-216ENST00000583282 DMWDQ09019 674 aa14.27□□□□□ -0.13
GGA3-216ENST00000583282 LBRQ14739 615 aaKnown RBP14.27□□□□□ -0.13
GGA3-216ENST00000583282 PDK1Q15118 436 aa14.27□□□□□ -0.13
GGA3-216ENST00000583282 NOMO1Q15155 1222 aa14.27□□□□□ -0.13
GGA3-216ENST00000583282 POM121L1PQ3SYA9 428 aa14.27□□□□□ -0.13
GGA3-216ENST00000583282 TIGD7Q6NT04 549 aaPredicted RBP14.27□□□□□ -0.13
GGA3-216ENST00000583282 C1orf210Q8IVY1 113 aa14.27□□□□□ -0.13
GGA3-216ENST00000583282 CCDC13Q8IYE1 715 aa14.27□□□□□ -0.13
GGA3-216ENST00000583282 PGBD3Q8N328 593 aa14.27□□□□□ -0.13
GGA3-216ENST00000583282 MDGA1Q8NFP4 955 aa14.27□□□□□ -0.13
GGA3-216ENST00000583282 ACTL9Q8TC94 416 aa14.27□□□□□ -0.13
GGA3-216ENST00000583282 NSMCE1Q8WV22 266 aa14.27□□□□□ -0.13
GGA3-216ENST00000583282 NAPGQ99747 312 aaPredicted RBP14.27□□□□□ -0.13
GGA3-216ENST00000583282 CEP41Q9BYV8 373 aa14.27□□□□□ -0.13
GGA3-216ENST00000583282 TPSD1Q9BZJ3 242 aa14.27□□□□□ -0.13
GGA3-216ENST00000583282 CEP44Q9C0F1 390 aa14.27□□□□□ -0.13
GGA3-216ENST00000583282 ZDHHC6Q9H6R6 413 aa14.27□□□□□ -0.13
GGA3-216ENST00000583282 PRSS16Q9NQE7 514 aa14.27□□□□□ -0.13
GGA3-216ENST00000583282 KCND1Q9NSA2 647 aa14.27□□□□□ -0.13
GGA3-216ENST00000583282 SMARCAL1Q9NZC9 954 aa14.27□□□□□ -0.13
GGA3-216ENST00000583282 LHX3Q9UBR4 397 aa14.27□□□□□ -0.13
GGA3-216ENST00000583282 TRIOO75962 3097 aa14.26□□□□□ -0.13
GGA3-216ENST00000583282 EML5Q05BV3 1969 aa14.26□□□□□ -0.13
GGA3-216ENST00000583282 H7C0C1 242 aa14.26□□□□□ -0.13
GGA3-216ENST00000583282 KCNK1O00180 336 aa14.26□□□□□ -0.13
GGA3-216ENST00000583282 MCF2LO15068 1137 aa14.26□□□□□ -0.13
GGA3-216ENST00000583282 FANCGO15287 622 aa14.26□□□□□ -0.13
GGA3-216ENST00000583282 APBB3O95704 486 aa14.26□□□□□ -0.13
GGA3-216ENST00000583282 IGSF6O95976 241 aa14.26□□□□□ -0.13
GGA3-216ENST00000583282 GABRG2P18507 467 aa14.26□□□□□ -0.13
GGA3-216ENST00000583282 RGRP47804 291 aa14.26□□□□□ -0.13
GGA3-216ENST00000583282 ATP5OP48047 213 aa14.26□□□□□ -0.13
GGA3-216ENST00000583282 CCNHP51946 323 aaPredicted RBP14.26□□□□□ -0.13
GGA3-216ENST00000583282 MAXP61244 160 aa14.26□□□□□ -0.13
GGA3-216ENST00000583282 CSTF1Q05048 431 aaKnown RBP14.26□□□□□ -0.13
GGA3-216ENST00000583282 PPIDQ08752 370 aaKnown RBP14.26□□□□□ -0.13
GGA3-216ENST00000583282 CAMK2GQ13555 558 aaPredicted RBP14.26□□□□□ -0.13
GGA3-216ENST00000583282 CYTH1Q15438 398 aa14.26□□□□□ -0.13
GGA3-216ENST00000583282 C9orf64Q5T6V5 341 aa14.26□□□□□ -0.13
GGA3-216ENST00000583282 SLC13A5Q86YT5 568 aaPredicted RBP14.26□□□□□ -0.13
GGA3-216ENST00000583282 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP14.26□□□□□ -0.13
GGA3-216ENST00000583282 PCDH20Q8N6Y1 951 aaKnown RBP14.26□□□□□ -0.13
GGA3-216ENST00000583282 KDM1BQ8NB78 822 aa14.26□□□□□ -0.13
GGA3-216ENST00000583282 CHST14Q8NCH0 376 aa14.26□□□□□ -0.13
GGA3-216ENST00000583282 ATG4AQ8WYN0 398 aa14.26□□□□□ -0.13
GGA3-216ENST00000583282 OR8D1Q8WZ84 308 aa14.26□□□□□ -0.13
GGA3-216ENST00000583282 PTPRN2Q92932 1015 aa14.26□□□□□ -0.13
GGA3-216ENST00000583282 ZNF419Q96HQ0 510 aaPredicted RBP14.26□□□□□ -0.13
GGA3-216ENST00000583282 CCDC114Q96M63 670 aa14.26□□□□□ -0.13
GGA3-216ENST00000583282 GDAP1L1Q96MZ0 367 aa14.26□□□□□ -0.13
GGA3-216ENST00000583282 QKIQ96PU8 341 aaKnown RBP eCLIP14.26□□□□□ -0.13
GGA3-216ENST00000583282 OSBPL9Q96SU4 736 aa14.26□□□□□ -0.13
GGA3-216ENST00000583282 C10orf88Q9H8K7 445 aa14.26□□□□□ -0.13
GGA3-216ENST00000583282 PRDM16Q9HAZ2 1276 aa14.26□□□□□ -0.13
GGA3-216ENST00000583282 CD93Q9NPY3 652 aa14.26□□□□□ -0.13
GGA3-216ENST00000583282 SUN2Q9UH99 717 aa14.26□□□□□ -0.13
GGA3-216ENST00000583282 R3HDM2Q9Y2K5 976 aaKnown RBP14.26□□□□□ -0.13
GGA3-216ENST00000583282 ZNF318Q5VUA4 2279 aa14.26□□□□□ -0.13
GGA3-216ENST00000583282 CTAGE9A4FU28 777 aa14.25□□□□□ -0.13
GGA3-216ENST00000583282 K7ESF4 209 aa14.25□□□□□ -0.13
GGA3-216ENST00000583282 ZBTB24O43167 697 aaPredicted RBP14.25□□□□□ -0.13
GGA3-216ENST00000583282 GJB3O75712 270 aa14.25□□□□□ -0.13
GGA3-216ENST00000583282 ALDH1A2O94788 518 aa14.25□□□□□ -0.13
GGA3-216ENST00000583282 PEX11BO96011 259 aa14.25□□□□□ -0.13
GGA3-216ENST00000583282 FGGP02679 453 aa14.25□□□□□ -0.13
GGA3-216ENST00000583282 GKP32189 559 aa14.25□□□□□ -0.13
GGA3-216ENST00000583282 MMP13P45452 471 aa14.25□□□□□ -0.13
GGA3-216ENST00000583282 COPAP53621 1224 aa14.25□□□□□ -0.13
GGA3-216ENST00000583282 EIF3EP60228 445 aaKnown RBP14.25□□□□□ -0.13
GGA3-216ENST00000583282 SLC20A2Q08357 652 aa14.25□□□□□ -0.13
GGA3-216ENST00000583282 SLC10A7Q0GE19 358 aa14.25□□□□□ -0.13
GGA3-216ENST00000583282 ZBTB17Q13105 803 aa14.25□□□□□ -0.13
GGA3-216ENST00000583282 KLF1Q13351 362 aaPredicted RBP14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms