RNA–Protein interactions for RNA: ENST00000582772.1

MSI2-216, Transcript of musashi RNA binding protein 2, human

TSL 3

Gene MSI2, Length 398 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MSI2-216	ENST00000582772	ZNF284	Q2VY69	593 aa		5.11	□□□□□ -1.59
MSI2-216	ENST00000582772	INTS6L	Q5JSJ4	861 aa	Known RBP	5.11	□□□□□ -1.59
MSI2-216	ENST00000582772	HECTD3	Q5T447	861 aa		5.11	□□□□□ -1.59
MSI2-216	ENST00000582772	C9orf64	Q5T6V5	341 aa		5.11	□□□□□ -1.59
MSI2-216	ENST00000582772	AGBL4	Q5VU57	503 aa		5.11	□□□□□ -1.59
MSI2-216	ENST00000582772	WWC2	Q6AWC2	1192 aa		5.11	□□□□□ -1.59
MSI2-216	ENST00000582772	PPP4R3A	Q6IN85	833 aa		5.11	□□□□□ -1.59
MSI2-216	ENST00000582772	RPUSD3	Q6P087	351 aa	Known RBP	5.11	□□□□□ -1.59
MSI2-216	ENST00000582772	FAM180A	Q6UWF9	173 aa		5.11	□□□□□ -1.59
MSI2-216	ENST00000582772	MED25	Q71SY5	747 aa		5.11	□□□□□ -1.59
MSI2-216	ENST00000582772	HEATR3	Q7Z4Q2	680 aa		5.11	□□□□□ -1.59
MSI2-216	ENST00000582772	PTAR1	Q7Z6K3	402 aa	Predicted RBP	5.11	□□□□□ -1.59
MSI2-216	ENST00000582772	ADIPOR2	Q86V24	386 aa		5.11	□□□□□ -1.59
MSI2-216	ENST00000582772	MMAA	Q8IVH4	418 aa	Known RBP	5.11	□□□□□ -1.59
MSI2-216	ENST00000582772	RBFA	Q8N0V3	343 aa		5.11	□□□□□ -1.59
MSI2-216	ENST00000582772	TMEM130	Q8N3G9	435 aa		5.11	□□□□□ -1.59
MSI2-216	ENST00000582772	ZNF713	Q8N859	430 aa	Predicted RBP	5.11	□□□□□ -1.59
MSI2-216	ENST00000582772		Q8N9G6	341 aa	Predicted RBP	5.11	□□□□□ -1.59
MSI2-216	ENST00000582772	PLEKHO2	Q8TD55	490 aa		5.11	□□□□□ -1.59
MSI2-216	ENST00000582772	PPP4R1	Q8TF05	950 aa		5.11	□□□□□ -1.59
MSI2-216	ENST00000582772	CYB5D2	Q8WUJ1	264 aa		5.11	□□□□□ -1.59
MSI2-216	ENST00000582772	SCG3	Q8WXD2	468 aa	Known RBP	5.11	□□□□□ -1.59
MSI2-216	ENST00000582772	SCARF2	Q96GP6	870 aa	Predicted RBP	5.11	□□□□□ -1.59
MSI2-216	ENST00000582772	BMF	Q96LC9	184 aa		5.11	□□□□□ -1.59
MSI2-216	ENST00000582772	FCRL4	Q96PJ5	515 aa		5.11	□□□□□ -1.59
MSI2-216	ENST00000582772	FAM129B	Q96TA1	746 aa		5.11	□□□□□ -1.59
MSI2-216	ENST00000582772	DPYSL5	Q9BPU6	564 aa		5.11	□□□□□ -1.59
MSI2-216	ENST00000582772	WDR77	Q9BQA1	342 aa	Predicted RBP	5.11	□□□□□ -1.59
MSI2-216	ENST00000582772	GULP1	Q9UBP9	304 aa		5.11	□□□□□ -1.59
MSI2-216	ENST00000582772	LSM7	Q9UK45	103 aa	Known RBP	5.11	□□□□□ -1.59
MSI2-216	ENST00000582772	WBP11	Q9Y2W2	641 aa	Known RBP	5.11	□□□□□ -1.59
MSI2-216	ENST00000582772	HERC1	Q15751	4861 aa		5.11	□□□□□ -1.59
MSI2-216	ENST00000582772	NUP210L	Q5VU65	1888 aa		5.11	□□□□□ -1.59
MSI2-216	ENST00000582772	CR1	P17927	2039 aa		5.11	□□□□□ -1.59
MSI2-216	ENST00000582772	TTC26	A0AVF1	554 aa		5.1	□□□□□ -1.59
MSI2-216	ENST00000582772	TRIM64	A6NGJ6	449 aa		5.1	□□□□□ -1.59
MSI2-216	ENST00000582772	TRIM64B	A6NI03	449 aa		5.1	□□□□□ -1.59
MSI2-216	ENST00000582772	FIGNL2	A6NMB9	653 aa		5.1	□□□□□ -1.59
MSI2-216	ENST00000582772		F5H423	210 aa	Predicted RBP	5.1	□□□□□ -1.59
MSI2-216	ENST00000582772	PIR	O00625	290 aa		5.1	□□□□□ -1.59
MSI2-216	ENST00000582772	SLC31A1	O15431	190 aa		5.1	□□□□□ -1.59
MSI2-216	ENST00000582772	SPINT1	O43278	529 aa		5.1	□□□□□ -1.59
MSI2-216	ENST00000582772	XPOT	O43592	962 aa	Known RBP	5.1	□□□□□ -1.59
MSI2-216	ENST00000582772	EDIL3	O43854	480 aa		5.1	□□□□□ -1.59
MSI2-216	ENST00000582772	CREB3	O43889	395 aa		5.1	□□□□□ -1.59
MSI2-216	ENST00000582772	KATNA1	O75449	491 aa		5.1	□□□□□ -1.59
MSI2-216	ENST00000582772	PLEKHA8P1	O95397	391 aa		5.1	□□□□□ -1.59
MSI2-216	ENST00000582772	ZDHHC11B	P0C7U3	371 aa		5.1	□□□□□ -1.59
MSI2-216	ENST00000582772	CD53	P19397	219 aa		5.1	□□□□□ -1.59
MSI2-216	ENST00000582772	HLA-F	P30511	346 aa		5.1	□□□□□ -1.59
MSI2-216	ENST00000582772	MCM5	P33992	734 aa		5.1	□□□□□ -1.59
MSI2-216	ENST00000582772	CHKA	P35790	457 aa		5.1	□□□□□ -1.59
MSI2-216	ENST00000582772	NAMPT	P43490	491 aa		5.1	□□□□□ -1.59
MSI2-216	ENST00000582772	CLDN2	P57739	230 aa		5.1	□□□□□ -1.59
MSI2-216	ENST00000582772	OSTN	P61366	133 aa		5.1	□□□□□ -1.59
MSI2-216	ENST00000582772	PPP2R5C	Q13362	524 aa		5.1	□□□□□ -1.59
MSI2-216	ENST00000582772	IL10RA	Q13651	578 aa		5.1	□□□□□ -1.59
MSI2-216	ENST00000582772	PCBP2	Q15366	365 aa	Known RBP eCLIP	5.1	□□□□□ -1.59	3e-6	■■■■□ 19.4
MSI2-216	ENST00000582772	ENOX2	Q16206	610 aa	Known RBP	5.1	□□□□□ -1.59
MSI2-216	ENST00000582772	OCLN	Q16625	522 aa		5.1	□□□□□ -1.59
MSI2-216	ENST00000582772	ZNF568	Q3ZCX4	644 aa		5.1	□□□□□ -1.59
MSI2-216	ENST00000582772	WSCD1	Q658N2	575 aa		5.1	□□□□□ -1.59
MSI2-216	ENST00000582772	OR6B2	Q6IFH4	312 aa		5.1	□□□□□ -1.59
MSI2-216	ENST00000582772	OGFOD3	Q6PK18	319 aa		5.1	□□□□□ -1.59
MSI2-216	ENST00000582772	TMEM207	Q6UWW9	146 aa		5.1	□□□□□ -1.59
MSI2-216	ENST00000582772	C6orf15	Q6UXA7	325 aa	Predicted RBP	5.1	□□□□□ -1.59
MSI2-216	ENST00000582772	ITIH6	Q6UXX5	1313 aa		5.1	□□□□□ -1.59
MSI2-216	ENST00000582772	SFR1	Q86XK3	245 aa		5.1	□□□□□ -1.59
MSI2-216	ENST00000582772	FAM129C	Q86XR2	697 aa		5.1	□□□□□ -1.59
MSI2-216	ENST00000582772	ZC3H3	Q8IXZ2	948 aa	Known RBP	5.1	□□□□□ -1.59
MSI2-216	ENST00000582772	PHACTR4	Q8IZ21	702 aa		5.1	□□□□□ -1.59
MSI2-216	ENST00000582772	ZADH2	Q8N4Q0	377 aa		5.1	□□□□□ -1.59
MSI2-216	ENST00000582772	DNAAF3	Q8N9W5	541 aa		5.1	□□□□□ -1.59
MSI2-216	ENST00000582772	ATP11C	Q8NB49	1132 aa		5.1	□□□□□ -1.59
MSI2-216	ENST00000582772	GOT1L1	Q8NHS2	421 aa	Predicted RBP	5.1	□□□□□ -1.59
MSI2-216	ENST00000582772	CTCFL	Q8NI51	663 aa	Predicted RBP	5.1	□□□□□ -1.59
MSI2-216	ENST00000582772	CA5BP1	Q8WTZ4	195 aa		5.1	□□□□□ -1.59
MSI2-216	ENST00000582772	NR4A3	Q92570	626 aa		5.1	□□□□□ -1.59
MSI2-216	ENST00000582772	BHMT	Q93088	406 aa		5.1	□□□□□ -1.59
MSI2-216	ENST00000582772	RNF25	Q96BH1	459 aa	Predicted RBP	5.1	□□□□□ -1.59
MSI2-216	ENST00000582772	GPATCH1	Q9BRR8	931 aa	Known RBP	5.1	□□□□□ -1.59
MSI2-216	ENST00000582772	LXN	Q9BS40	222 aa		5.1	□□□□□ -1.59
MSI2-216	ENST00000582772	KLF16	Q9BXK1	252 aa	Predicted RBP	5.1	□□□□□ -1.59
MSI2-216	ENST00000582772	GPR87	Q9BY21	358 aa		5.1	□□□□□ -1.59
MSI2-216	ENST00000582772	TCEAL2	Q9H3H9	227 aa	Predicted RBP	5.1	□□□□□ -1.59
MSI2-216	ENST00000582772	CLEC4E	Q9ULY5	219 aa		5.1	□□□□□ -1.59
MSI2-216	ENST00000582772	FHOD1	Q9Y613	1164 aa		5.1	□□□□□ -1.59
MSI2-216	ENST00000582772	EML1	O00423	815 aa		5.09	□□□□□ -1.59
MSI2-216	ENST00000582772	CYB561D2	O14569	222 aa		5.09	□□□□□ -1.59
MSI2-216	ENST00000582772	B4GAT1	O43505	415 aa		5.09	□□□□□ -1.59
MSI2-216	ENST00000582772	DDAH1	O94760	285 aa		5.09	□□□□□ -1.59
MSI2-216	ENST00000582772	ATP5B	P06576	529 aa	Known RBP	5.09	□□□□□ -1.59
MSI2-216	ENST00000582772	PLEK	P08567	350 aa	Predicted RBP	5.09	□□□□□ -1.59
MSI2-216	ENST00000582772	ALPI	P09923	528 aa		5.09	□□□□□ -1.59
MSI2-216	ENST00000582772	PRLR	P16471	622 aa		5.09	□□□□□ -1.59
MSI2-216	ENST00000582772	MZF1	P28698	734 aa	Predicted RBP	5.09	□□□□□ -1.59
MSI2-216	ENST00000582772	PSMD8	P48556	350 aa		5.09	□□□□□ -1.59
MSI2-216	ENST00000582772	EFNA5	P52803	228 aa		5.09	□□□□□ -1.59
MSI2-216	ENST00000582772	NAPA	P54920	295 aa		5.09	□□□□□ -1.59
MSI2-216	ENST00000582772	CASP6	P55212	293 aa		5.09	□□□□□ -1.59

Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms