RNA–Protein interactions for RNA: ENST00000581707.1

SREBF1-220, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 695 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-220ENST00000581707 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP19.91■□□□□ 0.78
SREBF1-220ENST00000581707 ISCUQ9H1K1 167 aa19.91■□□□□ 0.78
SREBF1-220ENST00000581707 KDM4CQ9H3R0 1056 aa19.91■□□□□ 0.78
SREBF1-220ENST00000581707 SLC32A1Q9H598 525 aa19.91■□□□□ 0.78
SREBF1-220ENST00000581707 LUC7L2Q9Y383 392 aaKnown RBP19.91■□□□□ 0.78
SREBF1-220ENST00000581707 PLXNA2O75051 1894 aa19.9■□□□□ 0.78
SREBF1-220ENST00000581707 CXorf51AA0A1B0GTR3 108 aa19.9■□□□□ 0.78
SREBF1-220ENST00000581707 C10orf142B7Z368 130 aa19.9■□□□□ 0.78
SREBF1-220ENST00000581707 CREB3O43889 395 aa19.9■□□□□ 0.78
SREBF1-220ENST00000581707 ZNF821O75541 412 aaPredicted RBP19.9■□□□□ 0.78
SREBF1-220ENST00000581707 PRNPP04156 253 aa19.9■□□□□ 0.78
SREBF1-220ENST00000581707 SERPING1P05155 500 aa19.9■□□□□ 0.78
SREBF1-220ENST00000581707 CD59P13987 128 aa19.9■□□□□ 0.78
SREBF1-220ENST00000581707 GRIA4P48058 902 aa19.9■□□□□ 0.78
SREBF1-220ENST00000581707 DNA2P51530 1060 aa19.9■□□□□ 0.78
SREBF1-220ENST00000581707 POLD3Q15054 466 aaPredicted RBP19.9■□□□□ 0.78
SREBF1-220ENST00000581707 DPY19L3Q6ZPD9 716 aa19.9■□□□□ 0.78
SREBF1-220ENST00000581707 VPS36Q86VN1 386 aa19.9■□□□□ 0.78
SREBF1-220ENST00000581707 PCDH20Q8N6Y1 951 aaKnown RBP19.9■□□□□ 0.78
SREBF1-220ENST00000581707 RTL3Q8N8U3 475 aaKnown RBP19.9■□□□□ 0.78
SREBF1-220ENST00000581707 CHST14Q8NCH0 376 aa19.9■□□□□ 0.78
SREBF1-220ENST00000581707 FNIP1Q8TF40 1166 aa19.9■□□□□ 0.78
SREBF1-220ENST00000581707 TRIM7Q9C029 511 aa19.9■□□□□ 0.78
SREBF1-220ENST00000581707 XPO4Q9C0E2 1151 aaKnown RBP19.9■□□□□ 0.78
SREBF1-220ENST00000581707 GAREM1Q9H706 876 aa19.9■□□□□ 0.78
SREBF1-220ENST00000581707 EBF2Q9HAK2 575 aa19.9■□□□□ 0.78
SREBF1-220ENST00000581707 MYO1AQ9UBC5 1043 aa19.9■□□□□ 0.78
SREBF1-220ENST00000581707 IL36AQ9UHA7 158 aa19.9■□□□□ 0.78
SREBF1-220ENST00000581707 TPX2Q9ULW0 747 aaKnown RBP19.9■□□□□ 0.78
SREBF1-220ENST00000581707 ANKRD6Q9Y2G4 727 aa19.9■□□□□ 0.78
SREBF1-220ENST00000581707 SCINQ9Y6U3 715 aa19.9■□□□□ 0.78
SREBF1-220ENST00000581707 KPNA3O00505 521 aaPredicted RBP19.89■□□□□ 0.77
SREBF1-220ENST00000581707 PLRG1O43660 514 aaKnown RBP19.89■□□□□ 0.77
SREBF1-220ENST00000581707 RNF8O76064 485 aa19.89■□□□□ 0.77
SREBF1-220ENST00000581707 CER1O95813 267 aa19.89■□□□□ 0.77
SREBF1-220ENST00000581707 CD160O95971 181 aa19.89■□□□□ 0.77
SREBF1-220ENST00000581707 GYPCP04921 128 aa19.89■□□□□ 0.77
SREBF1-220ENST00000581707 TPM3P06753 285 aa19.89■□□□□ 0.77
SREBF1-220ENST00000581707 GEMIN4P57678 1058 aaKnown RBP19.89■□□□□ 0.77
SREBF1-220ENST00000581707 RACK1P63244 317 aaKnown RBP19.89■□□□□ 0.77
SREBF1-220ENST00000581707 ZNF252P-AS1Q0IIN9 211 aa19.89■□□□□ 0.77
SREBF1-220ENST00000581707 KIF19Q2TAC6 998 aa19.89■□□□□ 0.77
SREBF1-220ENST00000581707 HLA-BQ31612 363 aa19.89■□□□□ 0.77
SREBF1-220ENST00000581707 ARSIQ5FYB1 569 aa19.89■□□□□ 0.77
SREBF1-220ENST00000581707 AGBL4Q5VU57 503 aa19.89■□□□□ 0.77
SREBF1-220ENST00000581707 ADAT2Q7Z6V5 191 aaKnown RBP19.89■□□□□ 0.77
SREBF1-220ENST00000581707 CATSPERBQ9H7T0 1116 aa19.89■□□□□ 0.77
SREBF1-220ENST00000581707 IL21RQ9HBE5 538 aa19.89■□□□□ 0.77
SREBF1-220ENST00000581707 MRPL47Q9HD33 250 aaKnown RBP19.89■□□□□ 0.77
SREBF1-220ENST00000581707 FCF1Q9Y324 198 aaKnown RBP19.89■□□□□ 0.77
SREBF1-220ENST00000581707 ACTL7AQ9Y615 435 aa19.89■□□□□ 0.77
SREBF1-220ENST00000581707 KDELR3O43731 214 aa19.88■□□□□ 0.77
SREBF1-220ENST00000581707 HTR7P34969 479 aa19.88■□□□□ 0.77
SREBF1-220ENST00000581707 CCDC15Q0P6D6 951 aa19.88■□□□□ 0.77
SREBF1-220ENST00000581707 CARD16Q5EG05 197 aa19.88■□□□□ 0.77
SREBF1-220ENST00000581707 ERMARDQ5T6L9 678 aa19.88■□□□□ 0.77
SREBF1-220ENST00000581707 LAYNQ6UX15 382 aa19.88■□□□□ 0.77
SREBF1-220ENST00000581707 ZNF354CQ86Y25 554 aa19.88■□□□□ 0.77
SREBF1-220ENST00000581707 ARFGAP1Q8N6T3 406 aa19.88■□□□□ 0.77
SREBF1-220ENST00000581707 GRIN3AQ8TCU5 1115 aa19.88■□□□□ 0.77
SREBF1-220ENST00000581707 ISG20Q96AZ6 181 aaKnown RBP19.88■□□□□ 0.77
SREBF1-220ENST00000581707 SLC6A18Q96N87 628 aa19.88■□□□□ 0.77
SREBF1-220ENST00000581707 TSPY26PQ9H489 355 aa19.88■□□□□ 0.77
SREBF1-220ENST00000581707 DHX35Q9H5Z1 703 aaKnown RBP19.88■□□□□ 0.77
SREBF1-220ENST00000581707 NOL6Q9H6R4 1146 aaKnown RBP19.88■□□□□ 0.77
SREBF1-220ENST00000581707 DYRK4Q9NR20 520 aa19.88■□□□□ 0.77
SREBF1-220ENST00000581707 GPATCH2LQ9NWQ4 482 aa19.88■□□□□ 0.77
SREBF1-220ENST00000581707 PCSK1NQ9UHG2 260 aa19.88■□□□□ 0.77
SREBF1-220ENST00000581707 AP4E1Q9UPM8 1137 aa19.88■□□□□ 0.77
SREBF1-220ENST00000581707 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP19.88■□□□□ 0.774e-8■■□□□ 14.3
SREBF1-220ENST00000581707 SNX11Q9Y5W9 270 aa19.88■□□□□ 0.77
SREBF1-220ENST00000581707 CABIN1Q9Y6J0 2220 aa19.88■□□□□ 0.77
SREBF1-220ENST00000581707 WASH4PA8MWX3 477 aa19.87■□□□□ 0.77
SREBF1-220ENST00000581707 FGF10O15520 208 aaPredicted RBP19.87■□□□□ 0.77
SREBF1-220ENST00000581707 LATO43561 262 aa19.87■□□□□ 0.77
SREBF1-220ENST00000581707 LEFTY1O75610 366 aa19.87■□□□□ 0.77
SREBF1-220ENST00000581707 MIPP30301 263 aa19.87■□□□□ 0.77
SREBF1-220ENST00000581707 CASP14P31944 242 aa19.87■□□□□ 0.77
SREBF1-220ENST00000581707 YBEYP58557 167 aaPredicted RBP19.87■□□□□ 0.77
SREBF1-220ENST00000581707 PPP2CBP62714 309 aa19.87■□□□□ 0.77
SREBF1-220ENST00000581707 PPP2CAP67775 309 aa19.87■□□□□ 0.77
SREBF1-220ENST00000581707 NFKBIBQ15653 356 aa19.87■□□□□ 0.77
SREBF1-220ENST00000581707 PIP5KL1Q5T9C9 394 aa19.87■□□□□ 0.77
SREBF1-220ENST00000581707 LEKR1Q6ZMV7 388 aa19.87■□□□□ 0.77
SREBF1-220ENST00000581707 PRPF39Q86UA1 669 aaKnown RBP19.87■□□□□ 0.77
SREBF1-220ENST00000581707 PLPP6Q8IY26 295 aa19.87■□□□□ 0.77
SREBF1-220ENST00000581707 ARRDC3Q96B67 414 aa19.87■□□□□ 0.77
SREBF1-220ENST00000581707 HEPHQ9BQS7 1158 aa19.87■□□□□ 0.77
SREBF1-220ENST00000581707 AASDHPPTQ9NRN7 309 aa19.87■□□□□ 0.77
SREBF1-220ENST00000581707 DONSONQ9NYP3 566 aa19.87■□□□□ 0.77
SREBF1-220ENST00000581707 WASF2Q9Y6W5 498 aa19.87■□□□□ 0.77
SREBF1-220ENST00000581707 DOCK9Q9BZ29 2069 aa19.87■□□□□ 0.77
SREBF1-220ENST00000581707 TMEM131Q92545 1883 aa19.86■□□□□ 0.77
SREBF1-220ENST00000581707 A0A087X0T9 212 aa19.86■□□□□ 0.77
SREBF1-220ENST00000581707 ZSCAN5CA6NGD5 496 aaPredicted RBP19.86■□□□□ 0.77
SREBF1-220ENST00000581707 EIF3CLB5ME19 914 aaKnown RBP19.86■□□□□ 0.77
SREBF1-220ENST00000581707 RASA4BC9J798 803 aa19.86■□□□□ 0.77
SREBF1-220ENST00000581707 RNF103O00237 685 aa19.86■□□□□ 0.77
SREBF1-220ENST00000581707 VILLO15195 856 aa19.86■□□□□ 0.77
SREBF1-220ENST00000581707 RASA4O43374 803 aa19.86■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms