RNA–Protein interactions for RNA: ENST00000581383.1

SMCHD1-205, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 806 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-205ENST00000581383 CNPY2Q9Y2B0 182 aa5.06□□□□□ -1.6
SMCHD1-205ENST00000581383 TARSL2A2RTX5 802 aaKnown RBP5.05□□□□□ -1.6
SMCHD1-205ENST00000581383 DPPA5A6NC42 116 aa5.05□□□□□ -1.6
SMCHD1-205ENST00000581383 TEX22C9J3V5 150 aa5.05□□□□□ -1.6
SMCHD1-205ENST00000581383 CHRM4P08173 479 aa5.05□□□□□ -1.6
SMCHD1-205ENST00000581383 TMEM191BP0C7N4 346 aa5.05□□□□□ -1.6
SMCHD1-205ENST00000581383 CHRNA5P30532 468 aa5.05□□□□□ -1.6
SMCHD1-205ENST00000581383 CIITAP33076 1130 aa5.05□□□□□ -1.6
SMCHD1-205ENST00000581383 SKIV2L2P42285 1042 aaKnown RBP5.05□□□□□ -1.6
SMCHD1-205ENST00000581383 PLK5Q496M5 336 aa5.05□□□□□ -1.6
SMCHD1-205ENST00000581383 C5orf22Q49AR2 442 aa5.05□□□□□ -1.6
SMCHD1-205ENST00000581383 SLC9C1Q4G0N8 1177 aa5.05□□□□□ -1.6
SMCHD1-205ENST00000581383 ZNF766Q5HY98 468 aa5.05□□□□□ -1.6
SMCHD1-205ENST00000581383 LRIG3Q6UXM1 1119 aa5.05□□□□□ -1.6
SMCHD1-205ENST00000581383 H1FNTQ75WM6 255 aaPredicted RBP5.05□□□□□ -1.6
SMCHD1-205ENST00000581383 CHD1LQ86WJ1 897 aa5.05□□□□□ -1.6
SMCHD1-205ENST00000581383 GHDCQ8N2G8 530 aa5.05□□□□□ -1.6
SMCHD1-205ENST00000581383 TNIP2Q8NFZ5 429 aa5.05□□□□□ -1.6
SMCHD1-205ENST00000581383 ZCCHC10Q8TBK6 192 aa5.05□□□□□ -1.6
SMCHD1-205ENST00000581383 NSMCE1Q8WV22 266 aa5.05□□□□□ -1.6
SMCHD1-205ENST00000581383 RFFLQ8WZ73 363 aa5.05□□□□□ -1.6
SMCHD1-205ENST00000581383 HSPH1Q92598 858 aa5.05□□□□□ -1.6
SMCHD1-205ENST00000581383 TMEM79Q9BSE2 394 aa5.05□□□□□ -1.6
SMCHD1-205ENST00000581383 PIMREGQ9BSJ6 248 aa5.05□□□□□ -1.6
SMCHD1-205ENST00000581383 VEZTQ9HBM0 779 aa5.05□□□□□ -1.6
SMCHD1-205ENST00000581383 SEMA4BQ9NPR2 832 aaPredicted RBP5.05□□□□□ -1.6
SMCHD1-205ENST00000581383 BEX4Q9NWD9 120 aaPredicted RBP5.05□□□□□ -1.6
SMCHD1-205ENST00000581383 NLKQ9UBE8 527 aa5.05□□□□□ -1.6
SMCHD1-205ENST00000581383 AASSQ9UDR5 926 aa5.05□□□□□ -1.6
SMCHD1-205ENST00000581383 UTS2RQ9UKP6 389 aa5.05□□□□□ -1.6
SMCHD1-205ENST00000581383 NAALADL1Q9UQQ1 740 aa5.05□□□□□ -1.6
SMCHD1-205ENST00000581383 CNTNAP2Q9UHC6 1331 aa5.04□□□□□ -1.6
SMCHD1-205ENST00000581383 OR6C68A6NDL8 312 aa5.04□□□□□ -1.6
SMCHD1-205ENST00000581383 INSIG1O15503 277 aa5.04□□□□□ -1.6
SMCHD1-205ENST00000581383 F9P00740 461 aa5.04□□□□□ -1.6
SMCHD1-205ENST00000581383 ATP5F1P24539 256 aaPredicted RBP5.04□□□□□ -1.6
SMCHD1-205ENST00000581383 CFHR1Q03591 330 aa5.04□□□□□ -1.6
SMCHD1-205ENST00000581383 VWA5B1Q5TIE3 1220 aa5.04□□□□□ -1.6
SMCHD1-205ENST00000581383 TMEM268Q5VZI3 342 aa5.04□□□□□ -1.6
SMCHD1-205ENST00000581383 TTLL5Q6EMB2 1281 aa5.04□□□□□ -1.6
SMCHD1-205ENST00000581383 C1orf122Q6ZSJ8 110 aa5.04□□□□□ -1.6
SMCHD1-205ENST00000581383 FAM57BQ71RH2 274 aa5.04□□□□□ -1.6
SMCHD1-205ENST00000581383 TBC1D1Q86TI0 1168 aaPredicted RBP5.04□□□□□ -1.6
SMCHD1-205ENST00000581383 CCDC25Q86WR0 208 aa5.04□□□□□ -1.6
SMCHD1-205ENST00000581383 DNAAF1Q8NEP3 725 aa5.04□□□□□ -1.6
SMCHD1-205ENST00000581383 BCAS4Q8TDM0 211 aa5.04□□□□□ -1.6
SMCHD1-205ENST00000581383 KIF1BPQ96EK5 621 aa5.04□□□□□ -1.6
SMCHD1-205ENST00000581383 LBHD1Q9BQE6 289 aaPredicted RBP5.04□□□□□ -1.6
SMCHD1-205ENST00000581383 IFT27Q9BW83 186 aa5.04□□□□□ -1.6
SMCHD1-205ENST00000581383 USP44Q9H0E7 712 aa5.04□□□□□ -1.6
SMCHD1-205ENST00000581383 SLC25A18Q9H1K4 315 aa5.04□□□□□ -1.6
SMCHD1-205ENST00000581383 HIPK3Q9H422 1215 aa5.04□□□□□ -1.6
SMCHD1-205ENST00000581383 AAMDCQ9H7C9 122 aa5.04□□□□□ -1.6
SMCHD1-205ENST00000581383 ICKQ9UPZ9 632 aa5.04□□□□□ -1.6
SMCHD1-205ENST00000581383 OSGIN2Q9Y236 505 aa5.04□□□□□ -1.6
SMCHD1-205ENST00000581383 GOLGA6L10A0A0M3HER8 536 aa5.03□□□□□ -1.6
SMCHD1-205ENST00000581383 TMEM247A6NEH6 219 aa5.03□□□□□ -1.6
SMCHD1-205ENST00000581383 RHODO00212 210 aa5.03□□□□□ -1.6
SMCHD1-205ENST00000581383 CEP104O60308 925 aa5.03□□□□□ -1.6
SMCHD1-205ENST00000581383 BCAR3O75815 825 aa5.03□□□□□ -1.6
SMCHD1-205ENST00000581383 NEURL1O76050 574 aa5.03□□□□□ -1.6
SMCHD1-205ENST00000581383 NTN1O95631 604 aa5.03□□□□□ -1.6
SMCHD1-205ENST00000581383 WNT1P04628 370 aa5.03□□□□□ -1.6
SMCHD1-205ENST00000581383 UFM1P61960 85 aa5.03□□□□□ -1.6
SMCHD1-205ENST00000581383 ZNF91Q05481 1191 aa5.03□□□□□ -1.6
SMCHD1-205ENST00000581383 PMPCAQ10713 525 aa5.03□□□□□ -1.6
SMCHD1-205ENST00000581383 TSTQ16762 297 aaKnown RBP5.03□□□□□ -1.6
SMCHD1-205ENST00000581383 PRICKLE4Q2TBC4 344 aa5.03□□□□□ -1.6
SMCHD1-205ENST00000581383 ZNF667Q5HYK9 610 aa5.03□□□□□ -1.6
SMCHD1-205ENST00000581383 CCDC30Q5VVM6 783 aa5.03□□□□□ -1.6
SMCHD1-205ENST00000581383 PLD5Q8N7P1 536 aa5.03□□□□□ -1.6
SMCHD1-205ENST00000581383 KCNG4Q8TDN1 519 aa5.03□□□□□ -1.6
SMCHD1-205ENST00000581383 FOXP1Q9H334 677 aaPredicted RBP5.03□□□□□ -1.6
SMCHD1-205ENST00000581383 EBF3Q9H4W6 596 aa5.03□□□□□ -1.6
SMCHD1-205ENST00000581383 OLA1Q9NTK5 396 aaKnown RBP5.03□□□□□ -1.6
SMCHD1-205ENST00000581383 TMEM45AQ9NWC5 275 aa5.03□□□□□ -1.6
SMCHD1-205ENST00000581383 IL1RAPL1Q9NZN1 696 aa5.03□□□□□ -1.6
SMCHD1-205ENST00000581383 HCN3Q9P1Z3 774 aa5.03□□□□□ -1.6
SMCHD1-205ENST00000581383 PEMTQ9UBM1 199 aa5.03□□□□□ -1.6
SMCHD1-205ENST00000581383 LAMP3Q9UQV4 416 aa5.03□□□□□ -1.6
SMCHD1-205ENST00000581383 A0A0A0MQY5 61 aa5.02□□□□□ -1.61
SMCHD1-205ENST00000581383 A0A1W2PPH5 198 aa5.02□□□□□ -1.61
SMCHD1-205ENST00000581383 GAGE10A6NGK3 116 aa5.02□□□□□ -1.61
SMCHD1-205ENST00000581383 E5RJQ4 531 aa5.02□□□□□ -1.61
SMCHD1-205ENST00000581383 ADAM10O14672 748 aa5.02□□□□□ -1.61
SMCHD1-205ENST00000581383 DDAH2O95865 285 aa5.02□□□□□ -1.61
SMCHD1-205ENST00000581383 ADAP00813 363 aa5.02□□□□□ -1.61
SMCHD1-205ENST00000581383 IL1AP01583 271 aa5.02□□□□□ -1.61
SMCHD1-205ENST00000581383 CAPN3P20807 821 aa5.02□□□□□ -1.61
SMCHD1-205ENST00000581383 MAN1A1P33908 653 aa5.02□□□□□ -1.61
SMCHD1-205ENST00000581383 RXRGP48443 463 aa5.02□□□□□ -1.61
SMCHD1-205ENST00000581383 CCR9P51686 369 aa5.02□□□□□ -1.61
SMCHD1-205ENST00000581383 KRT32Q14532 448 aa5.02□□□□□ -1.61
SMCHD1-205ENST00000581383 RBMS2Q15434 407 aaKnown RBP5.02□□□□□ -1.61
SMCHD1-205ENST00000581383 MIDNQ504T8 468 aa5.02□□□□□ -1.61
SMCHD1-205ENST00000581383 WDR78Q5VTH9 848 aa5.02□□□□□ -1.61
SMCHD1-205ENST00000581383 HAUS3Q68CZ6 603 aa5.02□□□□□ -1.61
SMCHD1-205ENST00000581383 ATF7IPQ6VMQ6 1270 aa5.02□□□□□ -1.61
SMCHD1-205ENST00000581383 DSTYKQ6XUX3 929 aa5.02□□□□□ -1.61
SMCHD1-205ENST00000581383 ZNF517Q6ZMY9 492 aaPredicted RBP5.02□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms