RNA–Protein interactions for RNA: ENST00000581003.5

CBX1-206, Transcript of chromobox 1, humanhuman

TSL 3

Gene CBX1, Length 812 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1-206ENST00000581003 TXNRD3NBQ6F5E7 133 aa12.84□□□□□ -0.35
CBX1-206ENST00000581003 PIP4P1Q86T03 277 aa12.84□□□□□ -0.35
CBX1-206ENST00000581003 TP53INP2Q8IXH6 220 aa12.84□□□□□ -0.35
CBX1-206ENST00000581003 OR2T34Q8NGX1 318 aa12.84□□□□□ -0.35
CBX1-206ENST00000581003 KLK6Q92876 244 aa12.84□□□□□ -0.35
CBX1-206ENST00000581003 FAM131CQ96AQ9 280 aa12.84□□□□□ -0.35
CBX1-206ENST00000581003 HMCESQ96FZ2 354 aa12.84□□□□□ -0.35
CBX1-206ENST00000581003 CELF6Q96J87 481 aaKnown RBP12.84□□□□□ -0.35
CBX1-206ENST00000581003 VCPIP1Q96JH7 1222 aa12.84□□□□□ -0.35
CBX1-206ENST00000581003 ISCUQ9H1K1 167 aa12.84□□□□□ -0.35
CBX1-206ENST00000581003 TSPY26PQ9H489 355 aa12.84□□□□□ -0.35
CBX1-206ENST00000581003 SUSD2Q9UGT4 822 aa12.84□□□□□ -0.35
CBX1-206ENST00000581003 AP4E1Q9UPM8 1137 aa12.84□□□□□ -0.35
CBX1-206ENST00000581003 WASF2Q9Y6W5 498 aa12.84□□□□□ -0.35
CBX1-206ENST00000581003 PLRG1O43660 514 aaKnown RBP12.83□□□□□ -0.36
CBX1-206ENST00000581003 SH3BP5O60239 455 aa12.83□□□□□ -0.36
CBX1-206ENST00000581003 RAMP2O60895 175 aa12.83□□□□□ -0.36
CBX1-206ENST00000581003 LEFTY1O75610 366 aa12.83□□□□□ -0.36
CBX1-206ENST00000581003 SERPING1P05155 500 aa12.83□□□□□ -0.36
CBX1-206ENST00000581003 GZMAP12544 262 aa12.83□□□□□ -0.36
CBX1-206ENST00000581003 SPINK2P20155 84 aa12.83□□□□□ -0.36
CBX1-206ENST00000581003 MIPP30301 263 aa12.83□□□□□ -0.36
CBX1-206ENST00000581003 MAPKAPK2P49137 400 aa12.83□□□□□ -0.36
CBX1-206ENST00000581003 CCNHP51946 323 aaPredicted RBP12.83□□□□□ -0.36
CBX1-206ENST00000581003 HLA-BQ31612 363 aa12.83□□□□□ -0.36
CBX1-206ENST00000581003 LRRC73Q5JTD7 316 aa12.83□□□□□ -0.36
CBX1-206ENST00000581003 LRSAM1Q6UWE0 723 aa12.83□□□□□ -0.36
CBX1-206ENST00000581003 ZNF783Q6ZMS7 281 aa12.83□□□□□ -0.36
CBX1-206ENST00000581003 KDM7AQ6ZMT4 941 aa12.83□□□□□ -0.36
CBX1-206ENST00000581003 NPWQ8N729 165 aa12.83□□□□□ -0.36
CBX1-206ENST00000581003 RTL3Q8N8U3 475 aaKnown RBP12.83□□□□□ -0.36
CBX1-206ENST00000581003 MYOCQ99972 504 aa12.83□□□□□ -0.36
CBX1-206ENST00000581003 PACSIN1Q9BY11 444 aa12.83□□□□□ -0.36
CBX1-206ENST00000581003 PCED1AQ9H1Q7 454 aa12.83□□□□□ -0.36
CBX1-206ENST00000581003 DHX35Q9H5Z1 703 aaKnown RBP12.83□□□□□ -0.36
CBX1-206ENST00000581003 GAREM1Q9H706 876 aa12.83□□□□□ -0.36
CBX1-206ENST00000581003 FZD3Q9NPG1 666 aa12.83□□□□□ -0.36
CBX1-206ENST00000581003 DNAAF2Q9NVR5 837 aaKnown RBP12.83□□□□□ -0.36
CBX1-206ENST00000581003 NENFQ9UMX5 172 aa12.83□□□□□ -0.36
CBX1-206ENST00000581003 SCML1Q9UN30 329 aa12.83□□□□□ -0.36
CBX1-206ENST00000581003 TBC1D3DA0A087WVF3 549 aa12.82□□□□□ -0.36
CBX1-206ENST00000581003 TBC1D3IA0A087WXS9 549 aa12.82□□□□□ -0.36
CBX1-206ENST00000581003 TBC1D3EA0A087X179 549 aa12.82□□□□□ -0.36
CBX1-206ENST00000581003 TBC1D3KA0A087X1G2 549 aa12.82□□□□□ -0.36
CBX1-206ENST00000581003 A0A1W2PPC4 97 aa12.82□□□□□ -0.36
CBX1-206ENST00000581003 TBC1D3FA6NER0 549 aaPredicted RBP12.82□□□□□ -0.36
CBX1-206ENST00000581003 LRRC72A6NJI9 287 aa12.82□□□□□ -0.36
CBX1-206ENST00000581003 TBC1D3LB9A6J9 549 aa12.82□□□□□ -0.36
CBX1-206ENST00000581003 RASA4BC9J798 803 aa12.82□□□□□ -0.36
CBX1-206ENST00000581003 RASA4O43374 803 aa12.82□□□□□ -0.36
CBX1-206ENST00000581003 OPHN1O60890 802 aa12.82□□□□□ -0.36
CBX1-206ENST00000581003 TBC1D3HP0C7X1 549 aa12.82□□□□□ -0.36
CBX1-206ENST00000581003 PRLRP16471 622 aa12.82□□□□□ -0.36
CBX1-206ENST00000581003 CLCN6P51797 869 aa12.82□□□□□ -0.36
CBX1-206ENST00000581003 AFF3P51826 1226 aaKnown RBP12.82□□□□□ -0.36
CBX1-206ENST00000581003 TPI1P60174 286 aa12.82□□□□□ -0.36
CBX1-206ENST00000581003 FOXK2Q01167 660 aa12.82□□□□□ -0.36
CBX1-206ENST00000581003 POLD3Q15054 466 aaPredicted RBP12.82□□□□□ -0.36
CBX1-206ENST00000581003 SMTNL2Q2TAL5 461 aa12.82□□□□□ -0.36
CBX1-206ENST00000581003 ACBD5Q5T8D3 534 aaPredicted RBP12.82□□□□□ -0.36
CBX1-206ENST00000581003 TBC1D3GQ6DHY5 549 aa12.82□□□□□ -0.36
CBX1-206ENST00000581003 TBC1D3CQ6IPX1 549 aa12.82□□□□□ -0.36
CBX1-206ENST00000581003 ARHGAP36Q6ZRI8 547 aa12.82□□□□□ -0.36
CBX1-206ENST00000581003 RABEPKQ7Z6M1 372 aa12.82□□□□□ -0.36
CBX1-206ENST00000581003 ZNF354CQ86Y25 554 aa12.82□□□□□ -0.36
CBX1-206ENST00000581003 TBC1D3Q8IZP1 549 aaPredicted RBP12.82□□□□□ -0.36
CBX1-206ENST00000581003 EXOC2Q96KP1 924 aa12.82□□□□□ -0.36
CBX1-206ENST00000581003 PPP1R9BQ96SB3 815 aa12.82□□□□□ -0.36
CBX1-206ENST00000581003 EPAS1Q99814 870 aa12.82□□□□□ -0.36
CBX1-206ENST00000581003 ZDHHC6Q9H6R6 413 aa12.82□□□□□ -0.36
CBX1-206ENST00000581003 IL36AQ9UHA7 158 aa12.82□□□□□ -0.36
CBX1-206ENST00000581003 GGT7Q9UJ14 662 aa12.82□□□□□ -0.36
CBX1-206ENST00000581003 ITM2BQ9Y287 266 aa12.82□□□□□ -0.36
CBX1-206ENST00000581003 BTBD3Q9Y2F9 522 aa12.82□□□□□ -0.36
CBX1-206ENST00000581003 ANKRD6Q9Y2G4 727 aa12.82□□□□□ -0.36
CBX1-206ENST00000581003 LUC7L2Q9Y383 392 aaKnown RBP12.82□□□□□ -0.36
CBX1-206ENST00000581003 GON4LQ3T8J9 2241 aa12.81□□□□□ -0.36
CBX1-206ENST00000581003 TMEM131Q92545 1883 aa12.81□□□□□ -0.36
CBX1-206ENST00000581003 C1QTNF3-AMACRE9PGA6 284 aa12.81□□□□□ -0.36
CBX1-206ENST00000581003 H0Y8X5 98 aa12.81□□□□□ -0.36
CBX1-206ENST00000581003 J3KR12 359 aa12.81□□□□□ -0.36
CBX1-206ENST00000581003 ALOX15BO15296 676 aa12.81□□□□□ -0.36
CBX1-206ENST00000581003 INSIG1O15503 277 aa12.81□□□□□ -0.36
CBX1-206ENST00000581003 SPINT1O43278 529 aa12.81□□□□□ -0.36
CBX1-206ENST00000581003 LATO43561 262 aa12.81□□□□□ -0.36
CBX1-206ENST00000581003 KDELR3O43731 214 aa12.81□□□□□ -0.36
CBX1-206ENST00000581003 TMCC1O94876 653 aa12.81□□□□□ -0.36
CBX1-206ENST00000581003 SYPP08247 313 aa12.81□□□□□ -0.36
CBX1-206ENST00000581003 EIF4A3P38919 411 aaKnown RBP12.81□□□□□ -0.36
CBX1-206ENST00000581003 ABL2P42684 1182 aa12.81□□□□□ -0.36
CBX1-206ENST00000581003 CARD16Q5EG05 197 aa12.81□□□□□ -0.36
CBX1-206ENST00000581003 PPP6R3Q5H9R7 873 aaPredicted RBP12.81□□□□□ -0.36
CBX1-206ENST00000581003 FAM46CQ5VWP2 391 aa12.81□□□□□ -0.36
CBX1-206ENST00000581003 SEL1L3Q68CR1 1132 aa12.81□□□□□ -0.36
CBX1-206ENST00000581003 RETSATQ6NUM9 610 aa12.81□□□□□ -0.36
CBX1-206ENST00000581003 PARS2Q7L3T8 475 aaKnown RBP12.81□□□□□ -0.36
CBX1-206ENST00000581003 DSG4Q86SJ6 1040 aa12.81□□□□□ -0.36
CBX1-206ENST00000581003 RYBPQ8N488 228 aaPredicted RBP12.81□□□□□ -0.36
CBX1-206ENST00000581003 SYN2Q92777 582 aaPredicted RBP12.81□□□□□ -0.36
CBX1-206ENST00000581003 SERAC1Q96JX3 654 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms