RNA–Protein interactions for RNA: ENST00000578692.1

CRLF3-203, Transcript of cytokine receptor like factor 3, humanhuman

TSL 2

Gene CRLF3, Length 1,392 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF3-203ENST00000578692 DYRK4Q9NR20 520 aa16.23■□□□□ 0.19
CRLF3-203ENST00000578692 IL36AQ9UHA7 158 aa16.23■□□□□ 0.19
CRLF3-203ENST00000578692 PRAMEF26H0Y7S4 382 aa16.22■□□□□ 0.19
CRLF3-203ENST00000578692 MAGEC1O60732 1142 aa16.22■□□□□ 0.19
CRLF3-203ENST00000578692 RNGTTO60942 597 aaKnown RBP16.22■□□□□ 0.19
CRLF3-203ENST00000578692 ZNF821O75541 412 aaPredicted RBP16.22■□□□□ 0.19
CRLF3-203ENST00000578692 CALB1P05937 261 aa16.22■□□□□ 0.19
CRLF3-203ENST00000578692 ARRB1P49407 418 aaPredicted RBP16.22■□□□□ 0.19
CRLF3-203ENST00000578692 SERPINH1P50454 418 aaKnown RBP16.22■□□□□ 0.19
CRLF3-203ENST00000578692 GSCP56915 257 aaPredicted RBP16.22■□□□□ 0.19
CRLF3-203ENST00000578692 NXPH1P58417 271 aa16.22■□□□□ 0.19
CRLF3-203ENST00000578692 ARF5P84085 180 aa16.22■□□□□ 0.19
CRLF3-203ENST00000578692 SETMARQ53H47 684 aaPredicted RBP16.22■□□□□ 0.19
CRLF3-203ENST00000578692 MANEALQ5VSG8 457 aa16.22■□□□□ 0.19
CRLF3-203ENST00000578692 RWDD4Q6NW29 188 aaKnown RBP16.22■□□□□ 0.19
CRLF3-203ENST00000578692 NEK5Q6P3R8 708 aa16.22■□□□□ 0.19
CRLF3-203ENST00000578692 WDR59Q6PJI9 974 aa16.22■□□□□ 0.19
CRLF3-203ENST00000578692 CCNI2Q6ZMN8 369 aaPredicted RBP16.22■□□□□ 0.19
CRLF3-203ENST00000578692 DPY19L3Q6ZPD9 716 aa16.22■□□□□ 0.19
CRLF3-203ENST00000578692 APTXQ7Z2E3 356 aaKnown RBP16.22■□□□□ 0.19
CRLF3-203ENST00000578692 IQCHQ86VS3 1027 aa16.22■□□□□ 0.19
CRLF3-203ENST00000578692 SAP25Q8TEE9 199 aa16.22■□□□□ 0.19
CRLF3-203ENST00000578692 FAM172AQ8WUF8 416 aa16.22■□□□□ 0.19
CRLF3-203ENST00000578692 AGPAT1Q99943 283 aa16.22■□□□□ 0.19
CRLF3-203ENST00000578692 MAGEB5Q9BZ81 275 aa16.22■□□□□ 0.19
CRLF3-203ENST00000578692 CEP44Q9C0F1 390 aa16.22■□□□□ 0.19
CRLF3-203ENST00000578692 HSD3B7Q9H2F3 369 aa16.22■□□□□ 0.19
CRLF3-203ENST00000578692 ERVMER34-1Q9H9K5 563 aa16.22■□□□□ 0.19
CRLF3-203ENST00000578692 SEPT11Q9NVA2 429 aaKnown RBP16.22■□□□□ 0.19
CRLF3-203ENST00000578692 CABIN1Q9Y6J0 2220 aa16.22■□□□□ 0.19
CRLF3-203ENST00000578692 FRYQ5TBA9 3013 aa16.22■□□□□ 0.19
CRLF3-203ENST00000578692 DOCK9Q9BZ29 2069 aa16.21■□□□□ 0.19
CRLF3-203ENST00000578692 SIGLEC16A6NMB1 481 aa16.21■□□□□ 0.19
CRLF3-203ENST00000578692 FAM72CH0Y354 149 aa16.21■□□□□ 0.19
CRLF3-203ENST00000578692 RNF103O00237 685 aa16.21■□□□□ 0.19
CRLF3-203ENST00000578692 YKT6O15498 198 aa16.21■□□□□ 0.19
CRLF3-203ENST00000578692 LEFTY1O75610 366 aa16.21■□□□□ 0.19
CRLF3-203ENST00000578692 PLEKP08567 350 aaPredicted RBP16.21■□□□□ 0.19
CRLF3-203ENST00000578692 RHOQP17081 205 aa16.21■□□□□ 0.19
CRLF3-203ENST00000578692 GPD1P21695 349 aa16.21■□□□□ 0.19
CRLF3-203ENST00000578692 ETFBP38117 255 aa16.21■□□□□ 0.19
CRLF3-203ENST00000578692 DNA2P51530 1060 aa16.21■□□□□ 0.19
CRLF3-203ENST00000578692 HDAC4P56524 1084 aa16.21■□□□□ 0.19
CRLF3-203ENST00000578692 OVGP1Q12889 678 aa16.21■□□□□ 0.19
CRLF3-203ENST00000578692 BNIP3Q12983 259 aa16.21■□□□□ 0.19
CRLF3-203ENST00000578692 CARD16Q5EG05 197 aa16.21■□□□□ 0.19
CRLF3-203ENST00000578692 FAM72AQ5TYM5 149 aa16.21■□□□□ 0.19
CRLF3-203ENST00000578692 FAM72DQ6L9T8 149 aa16.21■□□□□ 0.19
CRLF3-203ENST00000578692 ERN2Q76MJ5 926 aaKnown RBP16.21■□□□□ 0.19
CRLF3-203ENST00000578692 TMPRSS7Q7RTY8 843 aa16.21■□□□□ 0.19
CRLF3-203ENST00000578692 FAM72BQ86X60 149 aa16.21■□□□□ 0.19
CRLF3-203ENST00000578692 SPATS2Q86XZ4 545 aaKnown RBP16.21■□□□□ 0.19
CRLF3-203ENST00000578692 OXR1Q8N573 874 aa16.21■□□□□ 0.19
CRLF3-203ENST00000578692 PCDH20Q8N6Y1 951 aaKnown RBP16.21■□□□□ 0.19
CRLF3-203ENST00000578692 C3orf20Q8ND61 904 aa16.21■□□□□ 0.19
CRLF3-203ENST00000578692 GRIN3AQ8TCU5 1115 aa16.21■□□□□ 0.19
CRLF3-203ENST00000578692 HEPHQ9BQS7 1158 aa16.21■□□□□ 0.19
CRLF3-203ENST00000578692 NDFIP2Q9NV92 336 aa16.21■□□□□ 0.19
CRLF3-203ENST00000578692 FTSJ1Q9UET6 329 aa16.21■□□□□ 0.19
CRLF3-203ENST00000578692 DNAI1Q9UI46 699 aa16.21■□□□□ 0.19
CRLF3-203ENST00000578692 PLXNB3Q9ULL4 1909 aa16.2■□□□□ 0.18
CRLF3-203ENST00000578692 CXorf51AA0A1B0GTR3 108 aa16.2■□□□□ 0.18
CRLF3-203ENST00000578692 A0A1W2PQU0 124 aa16.2■□□□□ 0.18
CRLF3-203ENST00000578692 SRRM3A6NNA2 597 aaPredicted RBP16.2■□□□□ 0.18
CRLF3-203ENST00000578692 LRIG2O94898 1065 aa16.2■□□□□ 0.18
CRLF3-203ENST00000578692 CD160O95971 181 aa16.2■□□□□ 0.18
CRLF3-203ENST00000578692 CCDC172P0C7W6 258 aa16.2■□□□□ 0.18
CRLF3-203ENST00000578692 ACVRL1P37023 503 aa16.2■□□□□ 0.18
CRLF3-203ENST00000578692 RXRGP48443 463 aa16.2■□□□□ 0.18
CRLF3-203ENST00000578692 MAPKAPK2P49137 400 aa16.2■□□□□ 0.18
CRLF3-203ENST00000578692 TYRO3Q06418 890 aa16.2■□□□□ 0.18
CRLF3-203ENST00000578692 MON1BQ7L1V2 547 aa16.2■□□□□ 0.18
CRLF3-203ENST00000578692 NLRP14Q86W24 1093 aa16.2■□□□□ 0.18
CRLF3-203ENST00000578692 AOPEPQ8N6M6 819 aa16.2■□□□□ 0.18
CRLF3-203ENST00000578692 CCDC185Q8N715 623 aa16.2■□□□□ 0.18
CRLF3-203ENST00000578692 KLK6Q92876 244 aa16.2■□□□□ 0.18
CRLF3-203ENST00000578692 ARHGEF2Q92974 986 aaKnown RBP16.2■□□□□ 0.18
CRLF3-203ENST00000578692 KLHDC7BQ96G42 594 aa16.2■□□□□ 0.18
CRLF3-203ENST00000578692 PPP1R16AQ96I34 528 aa16.2■□□□□ 0.18
CRLF3-203ENST00000578692 HDAC8Q9BY41 377 aa16.2■□□□□ 0.18
CRLF3-203ENST00000578692 TMEM248Q9NWD8 314 aa16.2■□□□□ 0.18
CRLF3-203ENST00000578692 FCF1Q9Y324 198 aaKnown RBP16.2■□□□□ 0.18
CRLF3-203ENST00000578692 ACTL7AQ9Y615 435 aa16.2■□□□□ 0.18
CRLF3-203ENST00000578692 WASF2Q9Y6W5 498 aa16.2■□□□□ 0.18
CRLF3-203ENST00000578692 PTPRBP23467 1997 aa16.2■□□□□ 0.18
CRLF3-203ENST00000578692 SLC31A1O15431 190 aa16.19■□□□□ 0.18
CRLF3-203ENST00000578692 PCDH8O95206 1070 aa16.19■□□□□ 0.18
CRLF3-203ENST00000578692 LDOC1O95751 146 aaPredicted RBP16.19■□□□□ 0.18
CRLF3-203ENST00000578692 CAPNS1P04632 268 aa16.19■□□□□ 0.18
CRLF3-203ENST00000578692 ATP1A3P13637 1013 aa16.19■□□□□ 0.18
CRLF3-203ENST00000578692 FERP16591 822 aa16.19■□□□□ 0.18
CRLF3-203ENST00000578692 EPHA8P29322 1005 aaPredicted RBP16.19■□□□□ 0.18
CRLF3-203ENST00000578692 SCAPQ12770 1279 aa16.19■□□□□ 0.18
CRLF3-203ENST00000578692 CCDC157Q569K6 752 aa16.19■□□□□ 0.18
CRLF3-203ENST00000578692 SLFN11Q7Z7L1 901 aa16.19■□□□□ 0.18
CRLF3-203ENST00000578692 HORMAD1Q86X24 394 aa16.19■□□□□ 0.18
CRLF3-203ENST00000578692 PLPP6Q8IY26 295 aa16.19■□□□□ 0.18
CRLF3-203ENST00000578692 GALNT15Q8N3T1 639 aa16.19■□□□□ 0.18
CRLF3-203ENST00000578692 EID2Q8N6I1 236 aa16.19■□□□□ 0.18
CRLF3-203ENST00000578692 NTAN1Q96AB6 310 aa16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms