RNA–Protein interactions for RNA: ENST00000578317.5

COPS3-215, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 1,625 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-215ENST00000578317 FNTAP49354 379 aa8.2□□□□□ -1.1
COPS3-215ENST00000578317 OTUD4Q01804 1114 aaKnown RBP8.2□□□□□ -1.1
COPS3-215ENST00000578317 GBE1Q04446 702 aa8.2□□□□□ -1.1
COPS3-215ENST00000578317 GALNT2Q10471 571 aa8.2□□□□□ -1.1
COPS3-215ENST00000578317 ZNF177Q13360 481 aaPredicted RBP8.2□□□□□ -1.1
COPS3-215ENST00000578317 SLC12A1Q13621 1099 aa8.2□□□□□ -1.1
COPS3-215ENST00000578317 HTR4Q13639 388 aa8.2□□□□□ -1.1
COPS3-215ENST00000578317 LBRQ14739 615 aaKnown RBP8.2□□□□□ -1.1
COPS3-215ENST00000578317 PDK1Q15118 436 aa8.2□□□□□ -1.1
COPS3-215ENST00000578317 DHCR24Q15392 516 aa8.2□□□□□ -1.1
COPS3-215ENST00000578317 PARP15Q460N3 678 aa8.2□□□□□ -1.1
COPS3-215ENST00000578317 PARM1Q6UWI2 310 aa8.2□□□□□ -1.1
COPS3-215ENST00000578317 CTAGE6Q86UF2 777 aa8.2□□□□□ -1.1
COPS3-215ENST00000578317 TMEM25Q86YD3 366 aa8.2□□□□□ -1.1
COPS3-215ENST00000578317 ARHGAP12Q8IWW6 846 aa8.2□□□□□ -1.1
COPS3-215ENST00000578317 CTAGE4Q8IX94 777 aa8.2□□□□□ -1.1
COPS3-215ENST00000578317 CFAP52Q8N1V2 620 aa8.2□□□□□ -1.1
COPS3-215ENST00000578317 ATL2Q8NHH9 583 aa8.2□□□□□ -1.1
COPS3-215ENST00000578317 ACTL9Q8TC94 416 aa8.2□□□□□ -1.1
COPS3-215ENST00000578317 DDI1Q8WTU0 396 aa8.2□□□□□ -1.1
COPS3-215ENST00000578317 FGF14Q92915 247 aa8.2□□□□□ -1.1
COPS3-215ENST00000578317 SLCO2A1Q92959 643 aa8.2□□□□□ -1.1
COPS3-215ENST00000578317 ATP2A3Q93084 1043 aa8.2□□□□□ -1.1
COPS3-215ENST00000578317 AP1M1Q9BXS5 423 aa8.2□□□□□ -1.1
COPS3-215ENST00000578317 MAGEH1Q9H213 219 aa8.2□□□□□ -1.1
COPS3-215ENST00000578317 NOL6Q9H6R4 1146 aaKnown RBP8.2□□□□□ -1.1
COPS3-215ENST00000578317 TRPV5Q9NQA5 729 aa8.2□□□□□ -1.1
COPS3-215ENST00000578317 NDFIP2Q9NV92 336 aa8.2□□□□□ -1.1
COPS3-215ENST00000578317 SMARCAL1Q9NZC9 954 aa8.2□□□□□ -1.1
COPS3-215ENST00000578317 IGSF9Q9P2J2 1179 aa8.2□□□□□ -1.1
COPS3-215ENST00000578317 PCYOX1Q9UHG3 505 aa8.2□□□□□ -1.1
COPS3-215ENST00000578317 HCN2Q9UL51 889 aa8.2□□□□□ -1.1
COPS3-215ENST00000578317 R3HDM2Q9Y2K5 976 aaKnown RBP8.2□□□□□ -1.1
COPS3-215ENST00000578317 BRWD1Q9NSI6 2320 aa8.19□□□□□ -1.1
COPS3-215ENST00000578317 BCLAF3A2AJT9 711 aaKnown RBP8.19□□□□□ -1.1
COPS3-215ENST00000578317 TRDMT1O14717 391 aaKnown RBP8.19□□□□□ -1.1
COPS3-215ENST00000578317 MCF2LO15068 1137 aa8.19□□□□□ -1.1
COPS3-215ENST00000578317 TSPAN3O60637 253 aa8.19□□□□□ -1.1
COPS3-215ENST00000578317 RAMP2O60895 175 aa8.19□□□□□ -1.1
COPS3-215ENST00000578317 TBL1XO60907 577 aa8.19□□□□□ -1.1
COPS3-215ENST00000578317 PHF2O75151 1096 aa8.19□□□□□ -1.1
COPS3-215ENST00000578317 LUC7L3O95232 432 aaKnown RBP8.19□□□□□ -1.1
COPS3-215ENST00000578317 NFATC1O95644 943 aa8.19□□□□□ -1.1
COPS3-215ENST00000578317 ITGAVP06756 1048 aa8.19□□□□□ -1.1
COPS3-215ENST00000578317 RBP3P10745 1247 aa8.19□□□□□ -1.1
COPS3-215ENST00000578317 PECAM1P16284 738 aaPredicted RBP8.19□□□□□ -1.1
COPS3-215ENST00000578317 CCNCP24863 283 aa8.19□□□□□ -1.1
COPS3-215ENST00000578317 HOXD9P28356 352 aaPredicted RBP8.19□□□□□ -1.1
COPS3-215ENST00000578317 ETFBP38117 255 aa8.19□□□□□ -1.1
COPS3-215ENST00000578317 COILP38432 576 aaPredicted RBP8.19□□□□□ -1.1
COPS3-215ENST00000578317 IFNAR2P48551 515 aa8.19□□□□□ -1.1
COPS3-215ENST00000578317 IRAK1P51617 712 aa8.19□□□□□ -1.1
COPS3-215ENST00000578317 PLK1P53350 603 aa8.19□□□□□ -1.1
COPS3-215ENST00000578317 VCPP55072 806 aaKnown RBP8.19□□□□□ -1.1
COPS3-215ENST00000578317 DYNLT1P63172 113 aa8.19□□□□□ -1.1
COPS3-215ENST00000578317 LMNB2Q03252 620 aa8.19□□□□□ -1.1
COPS3-215ENST00000578317 GAD2Q05329 585 aa8.19□□□□□ -1.1
COPS3-215ENST00000578317 BYSLQ13895 437 aaKnown RBP8.19□□□□□ -1.1
COPS3-215ENST00000578317 OASLQ15646 514 aaKnown RBP8.19□□□□□ -1.1
COPS3-215ENST00000578317 LY6G5CQ5SRR4 150 aa8.19□□□□□ -1.1
COPS3-215ENST00000578317 CXorf57Q6NSI4 855 aaKnown RBP8.19□□□□□ -1.1
COPS3-215ENST00000578317 FIGNL1Q6PIW4 674 aa8.19□□□□□ -1.1
COPS3-215ENST00000578317 RIPOR1Q6ZS17 1223 aa8.19□□□□□ -1.1
COPS3-215ENST00000578317 MAATS1Q7Z4T9 603 aa8.19□□□□□ -1.1
COPS3-215ENST00000578317 ADAT2Q7Z6V5 191 aaKnown RBP8.19□□□□□ -1.1
COPS3-215ENST00000578317 MMGT1Q8N4V1 131 aa8.19□□□□□ -1.1
COPS3-215ENST00000578317 NPWQ8N729 165 aa8.19□□□□□ -1.1
COPS3-215ENST00000578317 PPM1EQ8WY54 764 aa8.19□□□□□ -1.1
COPS3-215ENST00000578317 MAGOHBQ96A72 148 aaKnown RBP8.19□□□□□ -1.1
COPS3-215ENST00000578317 HAUS1Q96CS2 278 aa8.19□□□□□ -1.1
COPS3-215ENST00000578317 HDAC11Q96DB2 347 aa8.19□□□□□ -1.1
COPS3-215ENST00000578317 P2RY11Q96G91 374 aa8.19□□□□□ -1.1
COPS3-215ENST00000578317 LMLNQ96KR4 655 aa8.19□□□□□ -1.1
COPS3-215ENST00000578317 TRMT61BQ9BVS5 477 aaKnown RBP8.19□□□□□ -1.1
COPS3-215ENST00000578317 CARD6Q9BX69 1037 aa8.19□□□□□ -1.1
COPS3-215ENST00000578317 ACE2Q9BYF1 805 aaPredicted RBP8.19□□□□□ -1.1
COPS3-215ENST00000578317 PLA2G2FQ9BZM2 168 aa8.19□□□□□ -1.1
COPS3-215ENST00000578317 USP29Q9HBJ7 922 aa8.19□□□□□ -1.1
COPS3-215ENST00000578317 RBM12Q9NTZ6 932 aaKnown RBP8.19□□□□□ -1.1
COPS3-215ENST00000578317 SAE1Q9UBE0 346 aaPredicted RBP8.19□□□□□ -1.1
COPS3-215ENST00000578317 DNPEPQ9ULA0 475 aa8.19□□□□□ -1.1
COPS3-215ENST00000578317 HEY1Q9Y5J3 304 aa8.19□□□□□ -1.1
COPS3-215ENST00000578317 OR51B4Q9Y5P0 310 aa8.19□□□□□ -1.1
COPS3-215ENST00000578317 WNT6Q9Y6F9 365 aa8.19□□□□□ -1.1
COPS3-215ENST00000578317 CFAP69A5D8W1 941 aa8.18□□□□□ -1.1
COPS3-215ENST00000578317 ARHGAP42A6NI28 874 aa8.18□□□□□ -1.1
COPS3-215ENST00000578317 C2CD4DB7Z1M9 353 aa8.18□□□□□ -1.1
COPS3-215ENST00000578317 ARNTLO00327 626 aa8.18□□□□□ -1.1
COPS3-215ENST00000578317 PPP1R12AO14974 1030 aaPredicted RBP8.18□□□□□ -1.1
COPS3-215ENST00000578317 MTSS1O43312 755 aa8.18□□□□□ -1.1
COPS3-215ENST00000578317 MFSD11O43934 449 aa8.18□□□□□ -1.1
COPS3-215ENST00000578317 SASH3O75995 380 aa8.18□□□□□ -1.1
COPS3-215ENST00000578317 SLU7O95391 586 aaKnown RBP8.18□□□□□ -1.1
COPS3-215ENST00000578317 FAM157BP0CG42 384 aa8.18□□□□□ -1.1
COPS3-215ENST00000578317 TYRP14679 529 aa8.18□□□□□ -1.1
COPS3-215ENST00000578317 GARSP41250 739 aaKnown RBP8.18□□□□□ -1.1
COPS3-215ENST00000578317 SGSHP51688 502 aa8.18□□□□□ -1.1
COPS3-215ENST00000578317 EIF3EP60228 445 aaKnown RBP8.18□□□□□ -1.1
COPS3-215ENST00000578317 PPIDQ08752 370 aaKnown RBP8.18□□□□□ -1.1
COPS3-215ENST00000578317 RUNX3Q13761 415 aa8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms