RNA–Protein interactions for RNA: ENST00000578194.5

CSNK1D-207, Transcript of casein kinase 1 delta, humanhuman

TSL 4

Gene CSNK1D, Length 567 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-207ENST00000578194 DPYSL3Q14195 570 aa12.93□□□□□ -0.34
CSNK1D-207ENST00000578194 ATP13A4Q4VNC1 1196 aa12.93□□□□□ -0.34
CSNK1D-207ENST00000578194 INO80DQ53TQ3 878 aaPredicted RBP12.93□□□□□ -0.34
CSNK1D-207ENST00000578194 AFMIDQ63HM1 303 aa12.93□□□□□ -0.34
CSNK1D-207ENST00000578194 USP30Q70CQ3 517 aa12.93□□□□□ -0.34
CSNK1D-207ENST00000578194 DAAM2Q86T65 1068 aa12.93□□□□□ -0.34
CSNK1D-207ENST00000578194 VSIG1Q86XK7 387 aa12.93□□□□□ -0.34
CSNK1D-207ENST00000578194 PLPP6Q8IY26 295 aa12.93□□□□□ -0.34
CSNK1D-207ENST00000578194 FAM129BQ96TA1 746 aa12.93□□□□□ -0.34
CSNK1D-207ENST00000578194 OMDQ99983 421 aa12.93□□□□□ -0.34
CSNK1D-207ENST00000578194 KLC2Q9H0B6 622 aa12.93□□□□□ -0.34
CSNK1D-207ENST00000578194 PCED1AQ9H1Q7 454 aa12.93□□□□□ -0.34
CSNK1D-207ENST00000578194 TNKS2Q9H2K2 1166 aa12.93□□□□□ -0.34
CSNK1D-207ENST00000578194 SP110Q9HB58 689 aa12.93□□□□□ -0.34
CSNK1D-207ENST00000578194 KLHL11Q9NVR0 708 aa12.93□□□□□ -0.34
CSNK1D-207ENST00000578194 UBA2Q9UBT2 640 aaPredicted RBP12.93□□□□□ -0.34
CSNK1D-207ENST00000578194 MBD1Q9UIS9 605 aaPredicted RBP12.93□□□□□ -0.34
CSNK1D-207ENST00000578194 TFR2Q9UP52 801 aa12.93□□□□□ -0.34
CSNK1D-207ENST00000578194 FCF1Q9Y324 198 aaKnown RBP12.93□□□□□ -0.34
CSNK1D-207ENST00000578194 SBDSQ9Y3A5 250 aaKnown RBP eCLIP12.93□□□□□ -0.34
CSNK1D-207ENST00000578194 PCDHGA5Q9Y5G8 931 aa12.93□□□□□ -0.34
CSNK1D-207ENST00000578194 MID1O15344 667 aa12.92□□□□□ -0.34
CSNK1D-207ENST00000578194 PRAMEF11O60813 436 aa12.92□□□□□ -0.34
CSNK1D-207ENST00000578194 TMCC1O94876 653 aa12.92□□□□□ -0.34
CSNK1D-207ENST00000578194 GSRP00390 522 aa12.92□□□□□ -0.34
CSNK1D-207ENST00000578194 CD48P09326 243 aa12.92□□□□□ -0.34
CSNK1D-207ENST00000578194 TNNT1P13805 278 aa12.92□□□□□ -0.34
CSNK1D-207ENST00000578194 KDELR1P24390 212 aa12.92□□□□□ -0.34
CSNK1D-207ENST00000578194 CHRNA3P32297 505 aa12.92□□□□□ -0.34
CSNK1D-207ENST00000578194 RHOAP61586 193 aa12.92□□□□□ -0.34
CSNK1D-207ENST00000578194 IL10RBQ08334 325 aa12.92□□□□□ -0.34
CSNK1D-207ENST00000578194 CCDC15Q0P6D6 951 aa12.92□□□□□ -0.34
CSNK1D-207ENST00000578194 MMRN1Q13201 1228 aa12.92□□□□□ -0.34
CSNK1D-207ENST00000578194 ANKRD20A8PQ5CZ79 823 aa12.92□□□□□ -0.34
CSNK1D-207ENST00000578194 CARD16Q5EG05 197 aa12.92□□□□□ -0.34
CSNK1D-207ENST00000578194 LEKR1Q6ZMV7 388 aa12.92□□□□□ -0.34
CSNK1D-207ENST00000578194 FAM124AQ86V42 546 aa12.92□□□□□ -0.34
CSNK1D-207ENST00000578194 ALYREFQ86V81 257 aaKnown RBP12.92□□□□□ -0.34
CSNK1D-207ENST00000578194 ARHGAP12Q8IWW6 846 aa12.92□□□□□ -0.34
CSNK1D-207ENST00000578194 RYBPQ8N488 228 aaPredicted RBP12.92□□□□□ -0.34
CSNK1D-207ENST00000578194 GPR161Q8N6U8 529 aaKnown RBP12.92□□□□□ -0.34
CSNK1D-207ENST00000578194 NPWQ8N729 165 aa12.92□□□□□ -0.34
CSNK1D-207ENST00000578194 FRMD1Q8N878 549 aa12.92□□□□□ -0.34
CSNK1D-207ENST00000578194 TMIEQ8NEW7 156 aa12.92□□□□□ -0.34
CSNK1D-207ENST00000578194 OR2A12Q8NGT7 310 aa12.92□□□□□ -0.34
CSNK1D-207ENST00000578194 TPCN2Q8NHX9 752 aa12.92□□□□□ -0.34
CSNK1D-207ENST00000578194 PIP4K2CQ8TBX8 421 aa12.92□□□□□ -0.34
CSNK1D-207ENST00000578194 TRAF3IP1Q8TDR0 691 aaPredicted RBP12.92□□□□□ -0.34
CSNK1D-207ENST00000578194 TOE1Q96GM8 510 aaKnown RBP12.92□□□□□ -0.34
CSNK1D-207ENST00000578194 GDAP1L1Q96MZ0 367 aa12.92□□□□□ -0.34
CSNK1D-207ENST00000578194 DESI2Q9BSY9 194 aa12.92□□□□□ -0.34
CSNK1D-207ENST00000578194 BTBD1Q9H0C5 482 aa12.92□□□□□ -0.34
CSNK1D-207ENST00000578194 SGK2Q9HBY8 427 aa12.92□□□□□ -0.34
CSNK1D-207ENST00000578194 DYRK4Q9NR20 520 aa12.92□□□□□ -0.34
CSNK1D-207ENST00000578194 FBXL12Q9NXK8 326 aa12.92□□□□□ -0.34
CSNK1D-207ENST00000578194 WSB2Q9NYS7 404 aaPredicted RBP12.92□□□□□ -0.34
CSNK1D-207ENST00000578194 PPM1HQ9ULR3 514 aa12.92□□□□□ -0.34
CSNK1D-207ENST00000578194 FZD4Q9ULV1 537 aa12.92□□□□□ -0.34
CSNK1D-207ENST00000578194 ALG6Q9Y672 507 aa12.92□□□□□ -0.34
CSNK1D-207ENST00000578194 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa12.91□□□□□ -0.34
CSNK1D-207ENST00000578194 RCCD1A6NED2 376 aa12.91□□□□□ -0.34
CSNK1D-207ENST00000578194 LRP3O75074 770 aa12.91□□□□□ -0.34
CSNK1D-207ENST00000578194 RNASEH2AO75792 299 aaKnown RBP12.91□□□□□ -0.34
CSNK1D-207ENST00000578194 CD160O95971 181 aa12.91□□□□□ -0.34
CSNK1D-207ENST00000578194 IGSF6O95976 241 aa12.91□□□□□ -0.34
CSNK1D-207ENST00000578194 CCNHP51946 323 aaPredicted RBP12.91□□□□□ -0.34
CSNK1D-207ENST00000578194 RAD51Q06609 339 aa12.91□□□□□ -0.34
CSNK1D-207ENST00000578194 RFTN1Q14699 578 aaPredicted RBP12.91□□□□□ -0.34
CSNK1D-207ENST00000578194 SYCP2LQ5T4T6 812 aa12.91□□□□□ -0.34
CSNK1D-207ENST00000578194 TMCO4Q5TGY1 634 aa12.91□□□□□ -0.34
CSNK1D-207ENST00000578194 LYSMD4Q5XG99 296 aa12.91□□□□□ -0.34
CSNK1D-207ENST00000578194 DPY19L3Q6ZPD9 716 aa12.91□□□□□ -0.34
CSNK1D-207ENST00000578194 CYP2U1Q7Z449 544 aa12.91□□□□□ -0.34
CSNK1D-207ENST00000578194 LRRC49Q8IUZ0 686 aa12.91□□□□□ -0.34
CSNK1D-207ENST00000578194 LRRC8AQ8IWT6 810 aa12.91□□□□□ -0.34
CSNK1D-207ENST00000578194 TMEFF1Q8IYR6 380 aa12.91□□□□□ -0.34
CSNK1D-207ENST00000578194 HDDC3Q8N4P3 179 aa12.91□□□□□ -0.34
CSNK1D-207ENST00000578194 ATPAF2Q8N5M1 289 aa12.91□□□□□ -0.34
CSNK1D-207ENST00000578194 CADM4Q8NFZ8 388 aa12.91□□□□□ -0.34
CSNK1D-207ENST00000578194 OR2AP1Q8NGE2 309 aa12.91□□□□□ -0.34
CSNK1D-207ENST00000578194 KIAA1524Q8TCG1 905 aa12.91□□□□□ -0.34
CSNK1D-207ENST00000578194 NSMCE1Q8WV22 266 aa12.91□□□□□ -0.34
CSNK1D-207ENST00000578194 FOXJ1Q92949 421 aa12.91□□□□□ -0.34
CSNK1D-207ENST00000578194 FAF2Q96CS3 445 aa12.91□□□□□ -0.34
CSNK1D-207ENST00000578194 PPP1R16AQ96I34 528 aa12.91□□□□□ -0.34
CSNK1D-207ENST00000578194 LRIG1Q96JA1 1093 aa12.91□□□□□ -0.34
CSNK1D-207ENST00000578194 ZNF599Q96NL3 588 aa12.91□□□□□ -0.34
CSNK1D-207ENST00000578194 HEPHQ9BQS7 1158 aa12.91□□□□□ -0.34
CSNK1D-207ENST00000578194 GPR174Q9BXC1 333 aa12.91□□□□□ -0.34
CSNK1D-207ENST00000578194 MAK16Q9BXY0 300 aaKnown RBP12.91□□□□□ -0.34
CSNK1D-207ENST00000578194 TM6SF2Q9BZW4 377 aa12.91□□□□□ -0.34
CSNK1D-207ENST00000578194 TSGA10Q9BZW7 698 aa12.91□□□□□ -0.34
CSNK1D-207ENST00000578194 LACRTQ9GZZ8 138 aa12.91□□□□□ -0.34
CSNK1D-207ENST00000578194 PDFQ9HBH1 243 aa12.91□□□□□ -0.34
CSNK1D-207ENST00000578194 CD93Q9NPY3 652 aa12.91□□□□□ -0.34
CSNK1D-207ENST00000578194 ETNK2Q9NVF9 386 aa12.91□□□□□ -0.34
CSNK1D-207ENST00000578194 HECAQ9UBI9 543 aaPredicted RBP12.91□□□□□ -0.34
CSNK1D-207ENST00000578194 IL36AQ9UHA7 158 aa12.91□□□□□ -0.34
CSNK1D-207ENST00000578194 IPO11Q9UI26 975 aaKnown RBP12.91□□□□□ -0.34
CSNK1D-207ENST00000578194 HYOU1Q9Y4L1 999 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms