RNA–Protein interactions for RNA: ENST00000577646.5

RARA-208, Transcript of retinoic acid receptor alpha, humanhuman

TSL 5

Gene RARA, Length 733 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RARA-208ENST00000577646 TNNT1P13805 278 aa12.61□□□□□ -0.39
RARA-208ENST00000577646 PRKCHP24723 683 aa12.61□□□□□ -0.39
RARA-208ENST00000577646 OXTRP30559 389 aa12.61□□□□□ -0.39
RARA-208ENST00000577646 CTSOP43234 321 aaPredicted RBP12.61□□□□□ -0.39
RARA-208ENST00000577646 MAPK8P45983 427 aa12.61□□□□□ -0.39
RARA-208ENST00000577646 SNRPD1P62314 119 aaKnown RBP12.61□□□□□ -0.39
RARA-208ENST00000577646 FOXK2Q01167 660 aa12.61□□□□□ -0.39
RARA-208ENST00000577646 MMRN1Q13201 1228 aa12.61□□□□□ -0.39
RARA-208ENST00000577646 HNRNPDQ14103 355 aaKnown RBP12.61□□□□□ -0.39
RARA-208ENST00000577646 RPS6KA1Q15418 735 aa12.61□□□□□ -0.39
RARA-208ENST00000577646 USP39Q53GS9 565 aaKnown RBP12.61□□□□□ -0.39
RARA-208ENST00000577646 C9orf64Q5T6V5 341 aa12.61□□□□□ -0.39
RARA-208ENST00000577646 MEI1Q5TIA1 1274 aa12.61□□□□□ -0.39
RARA-208ENST00000577646 NCBP2-AS2Q69YL0 99 aa12.61□□□□□ -0.39
RARA-208ENST00000577646 MFSD7Q6UXD7 560 aa12.61□□□□□ -0.39
RARA-208ENST00000577646 BBS12Q6ZW61 710 aa12.61□□□□□ -0.39
RARA-208ENST00000577646 RFX6Q8HWS3 928 aa12.61□□□□□ -0.39
RARA-208ENST00000577646 CCDC50Q8IVM0 306 aa12.61□□□□□ -0.39
RARA-208ENST00000577646 ATPAF2Q8N5M1 289 aa12.61□□□□□ -0.39
RARA-208ENST00000577646 PLD5Q8N7P1 536 aa12.61□□□□□ -0.39
RARA-208ENST00000577646 TTC13Q8NBP0 860 aa12.61□□□□□ -0.39
RARA-208ENST00000577646 TMIEQ8NEW7 156 aa12.61□□□□□ -0.39
RARA-208ENST00000577646 ATRIPQ8WXE1 791 aa12.61□□□□□ -0.39
RARA-208ENST00000577646 OR8D1Q8WZ84 308 aa12.61□□□□□ -0.39
RARA-208ENST00000577646 PRCCQ92733 491 aaPredicted RBP12.61□□□□□ -0.39
RARA-208ENST00000577646 KRT35Q92764 455 aa12.61□□□□□ -0.39
RARA-208ENST00000577646 PTPRN2Q92932 1015 aa12.61□□□□□ -0.39
RARA-208ENST00000577646 FERMT1Q9BQL6 677 aa12.61□□□□□ -0.39
RARA-208ENST00000577646 CARD9Q9H257 536 aa12.61□□□□□ -0.39
RARA-208ENST00000577646 GOLPH3Q9H4A6 298 aa12.61□□□□□ -0.39
RARA-208ENST00000577646 SP110Q9HB58 689 aa12.61□□□□□ -0.39
RARA-208ENST00000577646 PDFQ9HBH1 243 aa12.61□□□□□ -0.39
RARA-208ENST00000577646 ETNK2Q9NVF9 386 aa12.61□□□□□ -0.39
RARA-208ENST00000577646 UBA2Q9UBT2 640 aaPredicted RBP12.61□□□□□ -0.39
RARA-208ENST00000577646 JRKLQ9Y4A0 524 aa12.61□□□□□ -0.39
RARA-208ENST00000577646 MFHAS1Q9Y4C4 1052 aa12.61□□□□□ -0.39
RARA-208ENST00000577646 TCRBV21S2A2A0A5A6 115 aa12.6□□□□□ -0.39
RARA-208ENST00000577646 PRR23AA6NEV1 266 aa12.6□□□□□ -0.39
RARA-208ENST00000577646 TTC34A8MYJ7 566 aa12.6□□□□□ -0.39
RARA-208ENST00000577646 HACD1B0YJ81 288 aa12.6□□□□□ -0.39
RARA-208ENST00000577646 DFFAO00273 331 aa12.6□□□□□ -0.39
RARA-208ENST00000577646 PPP1R12AO14974 1030 aaPredicted RBP12.6□□□□□ -0.39
RARA-208ENST00000577646 MATN3O15232 486 aa12.6□□□□□ -0.39
RARA-208ENST00000577646 MTSS1O43312 755 aa12.6□□□□□ -0.39
RARA-208ENST00000577646 MAFKO60675 156 aa12.6□□□□□ -0.39
RARA-208ENST00000577646 POP4O95707 220 aaKnown RBP12.6□□□□□ -0.39
RARA-208ENST00000577646 CD160O95971 181 aa12.6□□□□□ -0.39
RARA-208ENST00000577646 ADH1BP00325 375 aa12.6□□□□□ -0.39
RARA-208ENST00000577646 MT-CO1P00395 513 aa12.6□□□□□ -0.39
RARA-208ENST00000577646 IGLV3-19P01714 112 aa12.6□□□□□ -0.39
RARA-208ENST00000577646 PRNPP04156 253 aa12.6□□□□□ -0.39
RARA-208ENST00000577646 ACADMP11310 421 aa12.6□□□□□ -0.39
RARA-208ENST00000577646 GABRG2P18507 467 aa12.6□□□□□ -0.39
RARA-208ENST00000577646 GARSP41250 739 aaKnown RBP12.6□□□□□ -0.39
RARA-208ENST00000577646 WASP42768 502 aa12.6□□□□□ -0.39
RARA-208ENST00000577646 STK19P49842 368 aaPredicted RBP12.6□□□□□ -0.39
RARA-208ENST00000577646 XRCC4Q13426 336 aa12.6□□□□□ -0.39
RARA-208ENST00000577646 TTC31Q49AM3 519 aaPredicted RBP12.6□□□□□ -0.39
RARA-208ENST00000577646 CARD16Q5EG05 197 aa12.6□□□□□ -0.39
RARA-208ENST00000577646 SPDYCQ5MJ68 293 aa12.6□□□□□ -0.39
RARA-208ENST00000577646 ZNF776Q68DI1 518 aaPredicted RBP12.6□□□□□ -0.39
RARA-208ENST00000577646 C22orf39Q6P5X5 142 aa12.6□□□□□ -0.39
RARA-208ENST00000577646 USP30Q70CQ3 517 aa12.6□□□□□ -0.39
RARA-208ENST00000577646 KBTBD6Q86V97 674 aa12.6□□□□□ -0.39
RARA-208ENST00000577646 TMPRSS6Q8IU80 811 aa12.6□□□□□ -0.39
RARA-208ENST00000577646 NPWQ8N729 165 aa12.6□□□□□ -0.39
RARA-208ENST00000577646 HCAR2Q8TDS4 363 aa12.6□□□□□ -0.39
RARA-208ENST00000577646 P3H4Q92791 437 aa12.6□□□□□ -0.39
RARA-208ENST00000577646 HDAC11Q96DB2 347 aa12.6□□□□□ -0.39
RARA-208ENST00000577646 SIPA1Q96FS4 1042 aa12.6□□□□□ -0.39
RARA-208ENST00000577646 CELF6Q96J87 481 aaKnown RBP12.6□□□□□ -0.39
RARA-208ENST00000577646 MRGPRX1Q96LB2 322 aa12.6□□□□□ -0.39
RARA-208ENST00000577646 PSKH2Q96QS6 385 aa12.6□□□□□ -0.39
RARA-208ENST00000577646 FRMD8P1Q9BZ68 369 aaPredicted RBP12.6□□□□□ -0.39
RARA-208ENST00000577646 OSBPL8Q9BZF1 889 aa12.6□□□□□ -0.39
RARA-208ENST00000577646 ITM2CQ9NQX7 267 aa12.6□□□□□ -0.39
RARA-208ENST00000577646 KLHL11Q9NVR0 708 aa12.6□□□□□ -0.39
RARA-208ENST00000577646 DTLQ9NZJ0 730 aa12.6□□□□□ -0.39
RARA-208ENST00000577646 BCCIPQ9P287 314 aaKnown RBP eCLIP12.6□□□□□ -0.39
RARA-208ENST00000577646 SEPT3Q9UH03 358 aa12.6□□□□□ -0.39
RARA-208ENST00000577646 TPX2Q9ULW0 747 aaKnown RBP12.6□□□□□ -0.39
RARA-208ENST00000577646 R4GN57 208 aa12.6□□□□□ -0.39
RARA-208ENST00000577646 MYO18AQ92614 2054 aaKnown RBP12.6□□□□□ -0.39
RARA-208ENST00000577646 MUC22E2RYF6 1773 aaPredicted RBP12.59□□□□□ -0.39
RARA-208ENST00000577646 SPTBN4Q9H254 2564 aa12.59□□□□□ -0.39
RARA-208ENST00000577646 PTPRZ1P23471 2315 aaPredicted RBP12.59□□□□□ -0.39
RARA-208ENST00000577646 A0A0U1RQJ8 604 aa12.59□□□□□ -0.39
RARA-208ENST00000577646 C1QTNF3-AMACRE9PGA6 284 aa12.59□□□□□ -0.39
RARA-208ENST00000577646 APOC4-APOC2K7ER74 178 aa12.59□□□□□ -0.39
RARA-208ENST00000577646 DDX3YO15523 660 aaKnown RBP12.59□□□□□ -0.39
RARA-208ENST00000577646 CST8O60676 142 aa12.59□□□□□ -0.39
RARA-208ENST00000577646 LILRB5O75023 590 aa12.59□□□□□ -0.39
RARA-208ENST00000577646 SIN3BO75182 1162 aa12.59□□□□□ -0.39
RARA-208ENST00000577646 FTCDO95954 541 aa12.59□□□□□ -0.39
RARA-208ENST00000577646 LMNAP02545 664 aaKnown RBP12.59□□□□□ -0.39
RARA-208ENST00000577646 APOC2P02655 101 aa12.59□□□□□ -0.39
RARA-208ENST00000577646 DNTTP04053 509 aa12.59□□□□□ -0.39
RARA-208ENST00000577646 HLA-EP13747 358 aa12.59□□□□□ -0.39
RARA-208ENST00000577646 C5AR1P21730 350 aa12.59□□□□□ -0.39
RARA-208ENST00000577646 GLDCP23378 1020 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms