RNA–Protein interactions for RNA: ENST00000577442.5

CDK5RAP3-203, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 617 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-203ENST00000577442 TFR2Q9UP52 801 aa12.96□□□□□ -0.33
CDK5RAP3-203ENST00000577442 ALG6Q9Y672 507 aa12.96□□□□□ -0.33
CDK5RAP3-203ENST00000577442 SHROOM3Q8TF72 1996 aa12.96□□□□□ -0.34
CDK5RAP3-203ENST00000577442 MYO15AQ9UKN7 3530 aa12.96□□□□□ -0.34
CDK5RAP3-203ENST00000577442 IGHV1OR15-9A0A0B4J2B8 117 aa12.95□□□□□ -0.34
CDK5RAP3-203ENST00000577442 SMAD6O43541 496 aaKnown RBP12.95□□□□□ -0.34
CDK5RAP3-203ENST00000577442 BNIP3LO60238 219 aa12.95□□□□□ -0.34
CDK5RAP3-203ENST00000577442 PRAMEF11O60813 436 aa12.95□□□□□ -0.34
CDK5RAP3-203ENST00000577442 NDUFS2O75306 463 aa12.95□□□□□ -0.34
CDK5RAP3-203ENST00000577442 GSRP00390 522 aa12.95□□□□□ -0.34
CDK5RAP3-203ENST00000577442 PRNPP04156 253 aa12.95□□□□□ -0.34
CDK5RAP3-203ENST00000577442 CD48P09326 243 aa12.95□□□□□ -0.34
CDK5RAP3-203ENST00000577442 TNNT1P13805 278 aa12.95□□□□□ -0.34
CDK5RAP3-203ENST00000577442 VAV1P15498 845 aa12.95□□□□□ -0.34
CDK5RAP3-203ENST00000577442 C5AR1P21730 350 aa12.95□□□□□ -0.34
CDK5RAP3-203ENST00000577442 KDELR1P24390 212 aa12.95□□□□□ -0.34
CDK5RAP3-203ENST00000577442 CD6P30203 668 aa12.95□□□□□ -0.34
CDK5RAP3-203ENST00000577442 PAPOLAP51003 745 aaKnown RBP12.95□□□□□ -0.34
CDK5RAP3-203ENST00000577442 TPMTP51580 245 aa12.95□□□□□ -0.34
CDK5RAP3-203ENST00000577442 SNRPD1P62314 119 aaKnown RBP12.95□□□□□ -0.34
CDK5RAP3-203ENST00000577442 MMRN1Q13201 1228 aa12.95□□□□□ -0.34
CDK5RAP3-203ENST00000577442 ATP13A4Q4VNC1 1196 aa12.95□□□□□ -0.34
CDK5RAP3-203ENST00000577442 ANKRD20A8PQ5CZ79 823 aa12.95□□□□□ -0.34
CDK5RAP3-203ENST00000577442 MMAAQ8IVH4 418 aaKnown RBP12.95□□□□□ -0.34
CDK5RAP3-203ENST00000577442 PLPP6Q8IY26 295 aa12.95□□□□□ -0.34
CDK5RAP3-203ENST00000577442 SYCE1Q8N0S2 351 aa12.95□□□□□ -0.34
CDK5RAP3-203ENST00000577442 ATPAF2Q8N5M1 289 aa12.95□□□□□ -0.34
CDK5RAP3-203ENST00000577442 TRAF3IP1Q8TDR0 691 aaPredicted RBP12.95□□□□□ -0.34
CDK5RAP3-203ENST00000577442 GANCQ8TET4 914 aa12.95□□□□□ -0.34
CDK5RAP3-203ENST00000577442 GDAP1L1Q96MZ0 367 aa12.95□□□□□ -0.34
CDK5RAP3-203ENST00000577442 ZNF830Q96NB3 372 aaPredicted RBP12.95□□□□□ -0.34
CDK5RAP3-203ENST00000577442 PHOX2BQ99453 314 aa12.95□□□□□ -0.34
CDK5RAP3-203ENST00000577442 SLC39A8Q9C0K1 460 aa12.95□□□□□ -0.34
CDK5RAP3-203ENST00000577442 LACRTQ9GZZ8 138 aa12.95□□□□□ -0.34
CDK5RAP3-203ENST00000577442 KLC2Q9H0B6 622 aa12.95□□□□□ -0.34
CDK5RAP3-203ENST00000577442 ITM2CQ9NQX7 267 aa12.95□□□□□ -0.34
CDK5RAP3-203ENST00000577442 NCDNQ9UBB6 729 aa12.95□□□□□ -0.34
CDK5RAP3-203ENST00000577442 INVSQ9Y283 1065 aa12.95□□□□□ -0.34
CDK5RAP3-203ENST00000577442 NCKAP1Q9Y2A7 1128 aa12.95□□□□□ -0.34
CDK5RAP3-203ENST00000577442 FCF1Q9Y324 198 aaKnown RBP12.95□□□□□ -0.34
CDK5RAP3-203ENST00000577442 ADGRG1Q9Y653 693 aa12.95□□□□□ -0.34
CDK5RAP3-203ENST00000577442 CEP192Q8TEP8 1941 aa12.95□□□□□ -0.34
CDK5RAP3-203ENST00000577442 DMDP11532 3685 aa12.94□□□□□ -0.34
CDK5RAP3-203ENST00000577442 MACROD2A1Z1Q3 448 aa12.94□□□□□ -0.34
CDK5RAP3-203ENST00000577442 K7ERQ8 282 aa12.94□□□□□ -0.34
CDK5RAP3-203ENST00000577442 MID1O15344 667 aa12.94□□□□□ -0.34
CDK5RAP3-203ENST00000577442 KRT86O43790 486 aa12.94□□□□□ -0.34
CDK5RAP3-203ENST00000577442 TMCC1O94876 653 aa12.94□□□□□ -0.34
CDK5RAP3-203ENST00000577442 IGSF6O95976 241 aa12.94□□□□□ -0.34
CDK5RAP3-203ENST00000577442 IL1BP01584 269 aa12.94□□□□□ -0.34
CDK5RAP3-203ENST00000577442 RETP07949 1114 aa12.94□□□□□ -0.34
CDK5RAP3-203ENST00000577442 CCDC175P0C221 793 aa12.94□□□□□ -0.34
CDK5RAP3-203ENST00000577442 ZFXP17010 805 aaPredicted RBP12.94□□□□□ -0.34
CDK5RAP3-203ENST00000577442 BCKDHBP21953 392 aa12.94□□□□□ -0.34
CDK5RAP3-203ENST00000577442 IL4RP24394 825 aa12.94□□□□□ -0.34
CDK5RAP3-203ENST00000577442 DPP6P42658 865 aa12.94□□□□□ -0.34
CDK5RAP3-203ENST00000577442 DNA2P51530 1060 aa12.94□□□□□ -0.34
CDK5RAP3-203ENST00000577442 RHOAP61586 193 aa12.94□□□□□ -0.34
CDK5RAP3-203ENST00000577442 RPL6Q02878 288 aaKnown RBP12.94□□□□□ -0.34
CDK5RAP3-203ENST00000577442 IL10RBQ08334 325 aa12.94□□□□□ -0.34
CDK5RAP3-203ENST00000577442 CCDC15Q0P6D6 951 aa12.94□□□□□ -0.34
CDK5RAP3-203ENST00000577442 RFTN1Q14699 578 aaPredicted RBP12.94□□□□□ -0.34
CDK5RAP3-203ENST00000577442 PAFAH1B3Q15102 231 aaKnown RBP12.94□□□□□ -0.34
CDK5RAP3-203ENST00000577442 CARD16Q5EG05 197 aa12.94□□□□□ -0.34
CDK5RAP3-203ENST00000577442 TMCO4Q5TGY1 634 aa12.94□□□□□ -0.34
CDK5RAP3-203ENST00000577442 KATNAL2Q8IYT4 538 aa12.94□□□□□ -0.34
CDK5RAP3-203ENST00000577442 FAM160A2Q8N612 972 aaPredicted RBP12.94□□□□□ -0.34
CDK5RAP3-203ENST00000577442 TMIEQ8NEW7 156 aa12.94□□□□□ -0.34
CDK5RAP3-203ENST00000577442 OR2AP1Q8NGE2 309 aa12.94□□□□□ -0.34
CDK5RAP3-203ENST00000577442 OR2A12Q8NGT7 310 aa12.94□□□□□ -0.34
CDK5RAP3-203ENST00000577442 PCDH19Q8TAB3 1148 aa12.94□□□□□ -0.34
CDK5RAP3-203ENST00000577442 KIAA1524Q8TCG1 905 aa12.94□□□□□ -0.34
CDK5RAP3-203ENST00000577442 NSMCE1Q8WV22 266 aa12.94□□□□□ -0.34
CDK5RAP3-203ENST00000577442 RAPGEF5Q92565 580 aa12.94□□□□□ -0.34
CDK5RAP3-203ENST00000577442 RUBCNQ92622 972 aa12.94□□□□□ -0.34
CDK5RAP3-203ENST00000577442 PPP1R16AQ96I34 528 aa12.94□□□□□ -0.34
CDK5RAP3-203ENST00000577442 RBM41Q96IZ5 413 aaKnown RBP12.94□□□□□ -0.34
CDK5RAP3-203ENST00000577442 ZNF599Q96NL3 588 aa12.94□□□□□ -0.34
CDK5RAP3-203ENST00000577442 FAM129BQ96TA1 746 aa12.94□□□□□ -0.34
CDK5RAP3-203ENST00000577442 OMDQ99983 421 aa12.94□□□□□ -0.34
CDK5RAP3-203ENST00000577442 HEPHQ9BQS7 1158 aa12.94□□□□□ -0.34
CDK5RAP3-203ENST00000577442 MAK16Q9BXY0 300 aaKnown RBP12.94□□□□□ -0.34
CDK5RAP3-203ENST00000577442 TM6SF2Q9BZW4 377 aa12.94□□□□□ -0.34
CDK5RAP3-203ENST00000577442 PCED1AQ9H1Q7 454 aa12.94□□□□□ -0.34
CDK5RAP3-203ENST00000577442 DUSP15Q9H1R2 295 aaPredicted RBP12.94□□□□□ -0.34
CDK5RAP3-203ENST00000577442 TNKS2Q9H2K2 1166 aa12.94□□□□□ -0.34
CDK5RAP3-203ENST00000577442 GOLPH3Q9H4A6 298 aa12.94□□□□□ -0.34
CDK5RAP3-203ENST00000577442 PDFQ9HBH1 243 aa12.94□□□□□ -0.34
CDK5RAP3-203ENST00000577442 SGK2Q9HBY8 427 aa12.94□□□□□ -0.34
CDK5RAP3-203ENST00000577442 DYRK4Q9NR20 520 aa12.94□□□□□ -0.34
CDK5RAP3-203ENST00000577442 ETNK2Q9NVF9 386 aa12.94□□□□□ -0.34
CDK5RAP3-203ENST00000577442 FBXL12Q9NXK8 326 aa12.94□□□□□ -0.34
CDK5RAP3-203ENST00000577442 WSB2Q9NYS7 404 aaPredicted RBP12.94□□□□□ -0.34
CDK5RAP3-203ENST00000577442 IPO11Q9UI26 975 aaKnown RBP12.94□□□□□ -0.34
CDK5RAP3-203ENST00000577442 SALL4Q9UJQ4 1053 aa12.94□□□□□ -0.34
CDK5RAP3-203ENST00000577442 FZD4Q9ULV1 537 aa12.94□□□□□ -0.34
CDK5RAP3-203ENST00000577442 HYOU1Q9Y4L1 999 aa12.94□□□□□ -0.34
CDK5RAP3-203ENST00000577442 PCDHGA5Q9Y5G8 931 aa12.94□□□□□ -0.34
CDK5RAP3-203ENST00000577442 MFSD11O43934 449 aa12.93□□□□□ -0.34
CDK5RAP3-203ENST00000577442 GFRA3O60609 400 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms