RNA–Protein interactions for RNA: ENST00000575426.1

LITAF-217, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 5

Gene LITAF, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-217ENST00000575426 FAM160A2Q8N612 972 aaPredicted RBP15.5■□□□□ 0.07
LITAF-217ENST00000575426 SUMF1Q8NBK3 374 aa15.5■□□□□ 0.07
LITAF-217ENST00000575426 KIAA1524Q8TCG1 905 aa15.5■□□□□ 0.07
LITAF-217ENST00000575426 TSC1Q92574 1164 aa15.5■□□□□ 0.07
LITAF-217ENST00000575426 ISG20Q96AZ6 181 aaKnown RBP15.5■□□□□ 0.07
LITAF-217ENST00000575426 OMDQ99983 421 aa15.5■□□□□ 0.07
LITAF-217ENST00000575426 LACRTQ9GZZ8 138 aa15.5■□□□□ 0.07
LITAF-217ENST00000575426 KLC2Q9H0B6 622 aa15.5■□□□□ 0.07
LITAF-217ENST00000575426 DUSP15Q9H1R2 295 aaPredicted RBP15.5■□□□□ 0.07
LITAF-217ENST00000575426 TNKS2Q9H2K2 1166 aa15.5■□□□□ 0.07
LITAF-217ENST00000575426 SP110Q9HB58 689 aa15.5■□□□□ 0.07
LITAF-217ENST00000575426 USP36Q9P275 1121 aaKnown RBP15.5■□□□□ 0.07
LITAF-217ENST00000575426 UBA2Q9UBT2 640 aaPredicted RBP15.5■□□□□ 0.07
LITAF-217ENST00000575426 FCF1Q9Y324 198 aaKnown RBP15.5■□□□□ 0.07
LITAF-217ENST00000575426 DUSP10Q9Y6W6 482 aa15.5■□□□□ 0.07
LITAF-217ENST00000575426 ANKRD36A6QL64 1941 aa15.5■□□□□ 0.07
LITAF-217ENST00000575426 PRR23AA6NEV1 266 aa15.49■□□□□ 0.07
LITAF-217ENST00000575426 PSTPIP1O43586 416 aa15.49■□□□□ 0.07
LITAF-217ENST00000575426 PRNPP04156 253 aa15.49■□□□□ 0.07
LITAF-217ENST00000575426 PTMAP06454 111 aaKnown RBP15.49■□□□□ 0.07
LITAF-217ENST00000575426 C5AR1P21730 350 aa15.49■□□□□ 0.07
LITAF-217ENST00000575426 IL4RP24394 825 aa15.49■□□□□ 0.07
LITAF-217ENST00000575426 CHRNA3P32297 505 aa15.49■□□□□ 0.07
LITAF-217ENST00000575426 DHPSP49366 369 aaPredicted RBP15.49■□□□□ 0.07
LITAF-217ENST00000575426 RAD51Q06609 339 aa15.49■□□□□ 0.07
LITAF-217ENST00000575426 AFMIDQ63HM1 303 aa15.49■□□□□ 0.07
LITAF-217ENST00000575426 USP30Q70CQ3 517 aa15.49■□□□□ 0.07
LITAF-217ENST00000575426 FAM124AQ86V42 546 aa15.49■□□□□ 0.07
LITAF-217ENST00000575426 FRMD1Q8N878 549 aa15.49■□□□□ 0.07
LITAF-217ENST00000575426 TRAF3IP1Q8TDR0 691 aaPredicted RBP15.49■□□□□ 0.07
LITAF-217ENST00000575426 NSMCE1Q8WV22 266 aa15.49■□□□□ 0.07
LITAF-217ENST00000575426 RAPGEF5Q92565 580 aa15.49■□□□□ 0.07
LITAF-217ENST00000575426 LOXL4Q96JB6 756 aa15.49■□□□□ 0.07
LITAF-217ENST00000575426 TSGA10Q9BZW7 698 aa15.49■□□□□ 0.07
LITAF-217ENST00000575426 PABPC3Q9H361 631 aaKnown RBP15.49■□□□□ 0.07
LITAF-217ENST00000575426 ETNK2Q9NVF9 386 aa15.49■□□□□ 0.07
LITAF-217ENST00000575426 FBXL12Q9NXK8 326 aa15.49■□□□□ 0.07
LITAF-217ENST00000575426 IL36AQ9UHA7 158 aa15.49■□□□□ 0.07
LITAF-217ENST00000575426 MBD1Q9UIS9 605 aaPredicted RBP15.49■□□□□ 0.07
LITAF-217ENST00000575426 SALL4Q9UJQ4 1053 aa15.49■□□□□ 0.07
LITAF-217ENST00000575426 ACTL7AQ9Y615 435 aa15.49■□□□□ 0.07
LITAF-217ENST00000575426 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa15.48■□□□□ 0.07
LITAF-217ENST00000575426 MACROD2A1Z1Q3 448 aa15.48■□□□□ 0.07
LITAF-217ENST00000575426 J3KR12 359 aa15.48■□□□□ 0.07
LITAF-217ENST00000575426 MID1O15344 667 aa15.48■□□□□ 0.07
LITAF-217ENST00000575426 KRT86O43790 486 aa15.48■□□□□ 0.07
LITAF-217ENST00000575426 GFRA3O60609 400 aa15.48■□□□□ 0.07
LITAF-217ENST00000575426 PRAMEF11O60813 436 aa15.48■□□□□ 0.07
LITAF-217ENST00000575426 PALMO75781 387 aa15.48■□□□□ 0.07
LITAF-217ENST00000575426 TMCC1O94876 653 aa15.48■□□□□ 0.07
LITAF-217ENST00000575426 CD160O95971 181 aa15.48■□□□□ 0.07
LITAF-217ENST00000575426 RHOAP61586 193 aa15.48■□□□□ 0.07
LITAF-217ENST00000575426 IL10RBQ08334 325 aa15.48■□□□□ 0.07
LITAF-217ENST00000575426 CCDC15Q0P6D6 951 aa15.48■□□□□ 0.07
LITAF-217ENST00000575426 NUMA1Q14980 2115 aa15.48■□□□□ 0.07
LITAF-217ENST00000575426 SPDYCQ5MJ68 293 aa15.48■□□□□ 0.07
LITAF-217ENST00000575426 PMS2CLQ68D20 193 aa15.48■□□□□ 0.07
LITAF-217ENST00000575426 ASCL5Q7RTU5 278 aa15.48■□□□□ 0.07
LITAF-217ENST00000575426 VSIG1Q86XK7 387 aa15.48■□□□□ 0.07
LITAF-217ENST00000575426 LRRC49Q8IUZ0 686 aa15.48■□□□□ 0.07
LITAF-217ENST00000575426 ARHGAP12Q8IWW6 846 aa15.48■□□□□ 0.07
LITAF-217ENST00000575426 PLPP6Q8IY26 295 aa15.48■□□□□ 0.07
LITAF-217ENST00000575426 TMEFF1Q8IYR6 380 aa15.48■□□□□ 0.07
LITAF-217ENST00000575426 SYCE1Q8N0S2 351 aa15.48■□□□□ 0.07
LITAF-217ENST00000575426 HDDC3Q8N4P3 179 aa15.48■□□□□ 0.07
LITAF-217ENST00000575426 NPWQ8N729 165 aa15.48■□□□□ 0.07
LITAF-217ENST00000575426 NETO2Q8NC67 525 aa15.48■□□□□ 0.07
LITAF-217ENST00000575426 TMIEQ8NEW7 156 aa15.48■□□□□ 0.07
LITAF-217ENST00000575426 OR2A12Q8NGT7 310 aa15.48■□□□□ 0.07
LITAF-217ENST00000575426 PCDH19Q8TAB3 1148 aa15.48■□□□□ 0.07
LITAF-217ENST00000575426 PIP4K2CQ8TBX8 421 aa15.48■□□□□ 0.07
LITAF-217ENST00000575426 RUBCNQ92622 972 aa15.48■□□□□ 0.07
LITAF-217ENST00000575426 RNF25Q96BH1 459 aaPredicted RBP15.48■□□□□ 0.07
LITAF-217ENST00000575426 TOE1Q96GM8 510 aaKnown RBP15.48■□□□□ 0.07
LITAF-217ENST00000575426 RNF157Q96PX1 679 aa15.48■□□□□ 0.07
LITAF-217ENST00000575426 HEPHQ9BQS7 1158 aa15.48■□□□□ 0.07
LITAF-217ENST00000575426 TM6SF2Q9BZW4 377 aa15.48■□□□□ 0.07
LITAF-217ENST00000575426 BTBD1Q9H0C5 482 aa15.48■□□□□ 0.07
LITAF-217ENST00000575426 GOLPH3Q9H4A6 298 aa15.48■□□□□ 0.07
LITAF-217ENST00000575426 CD93Q9NPY3 652 aa15.48■□□□□ 0.07
LITAF-217ENST00000575426 DYRK4Q9NR20 520 aa15.48■□□□□ 0.07
LITAF-217ENST00000575426 WSB2Q9NYS7 404 aaPredicted RBP15.48■□□□□ 0.07
LITAF-217ENST00000575426 HECAQ9UBI9 543 aaPredicted RBP15.48■□□□□ 0.07
LITAF-217ENST00000575426 IPO11Q9UI26 975 aaKnown RBP15.48■□□□□ 0.07
LITAF-217ENST00000575426 ADGRG1Q9Y653 693 aa15.48■□□□□ 0.07
LITAF-217ENST00000575426 TNRC6BQ9UPQ9 1833 aaKnown RBP15.47■□□□□ 0.07
LITAF-217ENST00000575426 A0A1W2PP55 124 aa15.47■□□□□ 0.07
LITAF-217ENST00000575426 ZNF487B1APH4 448 aa15.47■□□□□ 0.07
LITAF-217ENST00000575426 RNASEH2AO75792 299 aaKnown RBP15.47■□□□□ 0.07
LITAF-217ENST00000575426 ZRANB2O95218 330 aaKnown RBP eCLIP15.47■□□□□ 0.07
LITAF-217ENST00000575426 POP4O95707 220 aaKnown RBP15.47■□□□□ 0.07
LITAF-217ENST00000575426 IGSF6O95976 241 aa15.47■□□□□ 0.07
LITAF-217ENST00000575426 GSRP00390 522 aa15.47■□□□□ 0.07
LITAF-217ENST00000575426 IGLV3-19P01714 112 aa15.47■□□□□ 0.07
LITAF-217ENST00000575426 RETP07949 1114 aa15.47■□□□□ 0.07
LITAF-217ENST00000575426 CCDC175P0C221 793 aa15.47■□□□□ 0.07
LITAF-217ENST00000575426 C7P10643 843 aa15.47■□□□□ 0.07
LITAF-217ENST00000575426 ZFXP17010 805 aaPredicted RBP15.47■□□□□ 0.07
LITAF-217ENST00000575426 CCNHP51946 323 aaPredicted RBP15.47■□□□□ 0.07
LITAF-217ENST00000575426 RFTN1Q14699 578 aaPredicted RBP15.47■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms