RNA–Protein interactions for RNA: ENST00000573989.1

TRAPPC1-206, Transcript of trafficking protein particle complex 1, humanhuman

TSL 2

Gene TRAPPC1, Length 436 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-206ENST00000573989 STK40Q8N2I9 435 aa13.01□□□□□ -0.33
TRAPPC1-206ENST00000573989 BBS5Q8N3I7 341 aa13.01□□□□□ -0.33
TRAPPC1-206ENST00000573989 ATPAF2Q8N5M1 289 aa13.01□□□□□ -0.33
TRAPPC1-206ENST00000573989 NPWQ8N729 165 aa13.01□□□□□ -0.33
TRAPPC1-206ENST00000573989 UBL4BQ8N7F7 174 aa13.01□□□□□ -0.33
TRAPPC1-206ENST00000573989 PCDH19Q8TAB3 1148 aa13.01□□□□□ -0.33
TRAPPC1-206ENST00000573989 RAPGEF5Q92565 580 aa13.01□□□□□ -0.33
TRAPPC1-206ENST00000573989 FAF2Q96CS3 445 aa13.01□□□□□ -0.33
TRAPPC1-206ENST00000573989 RNF157Q96PX1 679 aa13.01□□□□□ -0.33
TRAPPC1-206ENST00000573989 EPC1Q9H2F5 836 aa13.01□□□□□ -0.33
TRAPPC1-206ENST00000573989 ITM2CQ9NQX7 267 aa13.01□□□□□ -0.33
TRAPPC1-206ENST00000573989 HAUS2Q9NVX0 235 aa13.01□□□□□ -0.33
TRAPPC1-206ENST00000573989 GUCA1BQ9UMX6 200 aa13.01□□□□□ -0.33
TRAPPC1-206ENST00000573989 CYP8B1Q9UNU6 501 aa13.01□□□□□ -0.33
TRAPPC1-206ENST00000573989 MIF4GDA9UHW6 222 aaKnown RBP13□□□□□ -0.33
TRAPPC1-206ENST00000573989 PROB1E7EW31 1015 aa13□□□□□ -0.33
TRAPPC1-206ENST00000573989 K7ERQ8 282 aa13□□□□□ -0.33
TRAPPC1-206ENST00000573989 APOL1O14791 398 aa13□□□□□ -0.33
TRAPPC1-206ENST00000573989 HRO43593 1189 aa13□□□□□ -0.33
TRAPPC1-206ENST00000573989 PRAMEF11O60813 436 aa13□□□□□ -0.33
TRAPPC1-206ENST00000573989 PALMO75781 387 aa13□□□□□ -0.33
TRAPPC1-206ENST00000573989 IGSF6O95976 241 aa13□□□□□ -0.33
TRAPPC1-206ENST00000573989 GSRP00390 522 aa13□□□□□ -0.33
TRAPPC1-206ENST00000573989 IL1BP01584 269 aa13□□□□□ -0.33
TRAPPC1-206ENST00000573989 C7P10643 843 aa13□□□□□ -0.33
TRAPPC1-206ENST00000573989 MX2P20592 715 aa13□□□□□ -0.33
TRAPPC1-206ENST00000573989 C5AR1P21730 350 aa13□□□□□ -0.33
TRAPPC1-206ENST00000573989 CTNNA1P35221 906 aaKnown RBP13□□□□□ -0.33
TRAPPC1-206ENST00000573989 TPMTP51580 245 aa13□□□□□ -0.33
TRAPPC1-206ENST00000573989 RHOAP61586 193 aa13□□□□□ -0.33
TRAPPC1-206ENST00000573989 TFDP2Q14188 446 aa13□□□□□ -0.33
TRAPPC1-206ENST00000573989 PAFAH1B3Q15102 231 aaKnown RBP13□□□□□ -0.33
TRAPPC1-206ENST00000573989 CST6Q15828 149 aa13□□□□□ -0.33
TRAPPC1-206ENST00000573989 CARD16Q5EG05 197 aa13□□□□□ -0.33
TRAPPC1-206ENST00000573989 TFDP3Q5H9I0 405 aa13□□□□□ -0.33
TRAPPC1-206ENST00000573989 SPDYCQ5MJ68 293 aa13□□□□□ -0.33
TRAPPC1-206ENST00000573989 ZNF662Q6ZS27 426 aa13□□□□□ -0.33
TRAPPC1-206ENST00000573989 USP30Q70CQ3 517 aa13□□□□□ -0.33
TRAPPC1-206ENST00000573989 BZW1Q7L1Q6 419 aaKnown RBP13□□□□□ -0.33
TRAPPC1-206ENST00000573989 CACUL1Q86Y37 369 aa13□□□□□ -0.33
TRAPPC1-206ENST00000573989 RFX6Q8HWS3 928 aa13□□□□□ -0.33
TRAPPC1-206ENST00000573989 MMAAQ8IVH4 418 aaKnown RBP13□□□□□ -0.33
TRAPPC1-206ENST00000573989 CCDC50Q8IVM0 306 aa13□□□□□ -0.33
TRAPPC1-206ENST00000573989 ARHGAP12Q8IWW6 846 aa13□□□□□ -0.33
TRAPPC1-206ENST00000573989 EXD1Q8NHP7 514 aa13□□□□□ -0.33
TRAPPC1-206ENST00000573989 GANCQ8TET4 914 aa13□□□□□ -0.33
TRAPPC1-206ENST00000573989 RNF25Q96BH1 459 aaPredicted RBP13□□□□□ -0.33
TRAPPC1-206ENST00000573989 FAM122AQ96E09 287 aa13□□□□□ -0.33
TRAPPC1-206ENST00000573989 PPP1R16AQ96I34 528 aa13□□□□□ -0.33
TRAPPC1-206ENST00000573989 PDLIM2Q96JY6 352 aa13□□□□□ -0.33
TRAPPC1-206ENST00000573989 GDAP1L1Q96MZ0 367 aa13□□□□□ -0.33
TRAPPC1-206ENST00000573989 ZNF599Q96NL3 588 aa13□□□□□ -0.33
TRAPPC1-206ENST00000573989 ALS2CR12Q96Q35 445 aa13□□□□□ -0.33
TRAPPC1-206ENST00000573989 FAM129BQ96TA1 746 aa13□□□□□ -0.33
TRAPPC1-206ENST00000573989 OMDQ99983 421 aa13□□□□□ -0.33
TRAPPC1-206ENST00000573989 KLC2Q9H0B6 622 aa13□□□□□ -0.33
TRAPPC1-206ENST00000573989 SLC6A17Q9H1V8 727 aa13□□□□□ -0.33
TRAPPC1-206ENST00000573989 GOLPH3Q9H4A6 298 aa13□□□□□ -0.33
TRAPPC1-206ENST00000573989 MTG2Q9H4K7 406 aa13□□□□□ -0.33
TRAPPC1-206ENST00000573989 DYRK4Q9NR20 520 aa13□□□□□ -0.33
TRAPPC1-206ENST00000573989 ETNK2Q9NVF9 386 aa13□□□□□ -0.33
TRAPPC1-206ENST00000573989 USP36Q9P275 1121 aaKnown RBP13□□□□□ -0.33
TRAPPC1-206ENST00000573989 IPO11Q9UI26 975 aaKnown RBP13□□□□□ -0.33
TRAPPC1-206ENST00000573989 SMG5Q9UPR3 1016 aaKnown RBP13□□□□□ -0.33
TRAPPC1-206ENST00000573989 FCF1Q9Y324 198 aaKnown RBP13□□□□□ -0.33
TRAPPC1-206ENST00000573989 GRID2IPA4D2P6 1211 aa12.99□□□□□ -0.33
TRAPPC1-206ENST00000573989 TMCC1O94876 653 aa12.99□□□□□ -0.33
TRAPPC1-206ENST00000573989 VAV1P15498 845 aa12.99□□□□□ -0.33
TRAPPC1-206ENST00000573989 CTNNA2P26232 953 aa12.99□□□□□ -0.33
TRAPPC1-206ENST00000573989 CD6P30203 668 aa12.99□□□□□ -0.33
TRAPPC1-206ENST00000573989 CHRNA3P32297 505 aa12.99□□□□□ -0.33
TRAPPC1-206ENST00000573989 SLC8A1P32418 973 aa12.99□□□□□ -0.33
TRAPPC1-206ENST00000573989 PSMD8P48556 350 aa12.99□□□□□ -0.33
TRAPPC1-206ENST00000573989 RENBPP51606 427 aa12.99□□□□□ -0.33
TRAPPC1-206ENST00000573989 RWDD2BP57060 319 aa12.99□□□□□ -0.33
TRAPPC1-206ENST00000573989 COPS2P61201 443 aa12.99□□□□□ -0.33
TRAPPC1-206ENST00000573989 GRM3Q14832 879 aa12.99□□□□□ -0.33
TRAPPC1-206ENST00000573989 MAP7D1Q3KQU3 841 aa12.99□□□□□ -0.33
TRAPPC1-206ENST00000573989 NCBP2-AS2Q69YL0 99 aa12.99□□□□□ -0.33
TRAPPC1-206ENST00000573989 TIGD7Q6NT04 549 aaPredicted RBP12.99□□□□□ -0.33
TRAPPC1-206ENST00000573989 LPCAT2Q7L5N7 544 aa12.99□□□□□ -0.33
TRAPPC1-206ENST00000573989 ABCA7Q8IZY2 2146 aa12.99□□□□□ -0.33
TRAPPC1-206ENST00000573989 RYBPQ8N488 228 aaPredicted RBP12.99□□□□□ -0.33
TRAPPC1-206ENST00000573989 LRRC57Q8N9N7 239 aa12.99□□□□□ -0.33
TRAPPC1-206ENST00000573989 TMIEQ8NEW7 156 aa12.99□□□□□ -0.33
TRAPPC1-206ENST00000573989 OR2AP1Q8NGE2 309 aa12.99□□□□□ -0.33
TRAPPC1-206ENST00000573989 OR2A12Q8NGT7 310 aa12.99□□□□□ -0.33
TRAPPC1-206ENST00000573989 RLN3Q8WXF3 142 aa12.99□□□□□ -0.33
TRAPPC1-206ENST00000573989 LRIG1Q96JA1 1093 aa12.99□□□□□ -0.33
TRAPPC1-206ENST00000573989 LOXL4Q96JB6 756 aa12.99□□□□□ -0.33
TRAPPC1-206ENST00000573989 ZC3H10Q96K80 434 aaKnown RBP12.99□□□□□ -0.33
TRAPPC1-206ENST00000573989 HEPHQ9BQS7 1158 aa12.99□□□□□ -0.33
TRAPPC1-206ENST00000573989 CINPQ9BW66 212 aaPredicted RBP12.99□□□□□ -0.33
TRAPPC1-206ENST00000573989 TNKS2Q9H2K2 1166 aa12.99□□□□□ -0.33
TRAPPC1-206ENST00000573989 PABPC3Q9H361 631 aaKnown RBP12.99□□□□□ -0.33
TRAPPC1-206ENST00000573989 SGK2Q9HBY8 427 aa12.99□□□□□ -0.33
TRAPPC1-206ENST00000573989 FBXL12Q9NXK8 326 aa12.99□□□□□ -0.33
TRAPPC1-206ENST00000573989 HECAQ9UBI9 543 aaPredicted RBP12.99□□□□□ -0.33
TRAPPC1-206ENST00000573989 TRIM10Q9UDY6 481 aa12.99□□□□□ -0.33
TRAPPC1-206ENST00000573989 IL36AQ9UHA7 158 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms