RNA–Protein interactions for RNA: ENST00000572750.1

CHD3-215, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 3

Gene CHD3, Length 750 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-215ENST00000572750 RPS14P62263 151 aaKnown RBP16.13■□□□□ 0.17
CHD3-215ENST00000572750 ELAVL3Q14576 367 aaKnown RBP16.13■□□□□ 0.17
CHD3-215ENST00000572750 ZNF776Q68DI1 518 aaPredicted RBP16.13■□□□□ 0.17
CHD3-215ENST00000572750 RETSATQ6NUM9 610 aa16.13■□□□□ 0.17
CHD3-215ENST00000572750 C11orf63Q6NUN7 778 aa16.13■□□□□ 0.17
CHD3-215ENST00000572750 ARHGAP12Q8IWW6 846 aa16.13■□□□□ 0.17
CHD3-215ENST00000572750 TP53INP2Q8IXH6 220 aa16.13■□□□□ 0.17
CHD3-215ENST00000572750 GPR161Q8N6U8 529 aaKnown RBP16.13■□□□□ 0.17
CHD3-215ENST00000572750 KCTD6Q8NC69 237 aa16.13■□□□□ 0.17
CHD3-215ENST00000572750 CCDC112Q8NEF3 446 aa16.13■□□□□ 0.17
CHD3-215ENST00000572750 FAM71BQ8TC56 605 aa16.13■□□□□ 0.17
CHD3-215ENST00000572750 SLC39A8Q9C0K1 460 aa16.13■□□□□ 0.17
CHD3-215ENST00000572750 RSPH9Q9H1X1 276 aaPredicted RBP16.13■□□□□ 0.17
CHD3-215ENST00000572750 TNKS2Q9H2K2 1166 aa16.13■□□□□ 0.17
CHD3-215ENST00000572750 FBRSQ9HAH7 460 aa16.13■□□□□ 0.17
CHD3-215ENST00000572750 MBD1Q9UIS9 605 aaPredicted RBP16.13■□□□□ 0.17
CHD3-215ENST00000572750 HPCAL4Q9UM19 191 aa16.13■□□□□ 0.17
CHD3-215ENST00000572750 FCF1Q9Y324 198 aaKnown RBP16.13■□□□□ 0.17
CHD3-215ENST00000572750 CEP192Q8TEP8 1941 aa16.13■□□□□ 0.17
CHD3-215ENST00000572750 LAMA5O15230 3695 aa16.12■□□□□ 0.17
CHD3-215ENST00000572750 IGHV1OR15-9A0A0B4J2B8 117 aa16.12■□□□□ 0.17
CHD3-215ENST00000572750 TARSL2A2RTX5 802 aaKnown RBP16.12■□□□□ 0.17
CHD3-215ENST00000572750 LRRD1A4D1F6 860 aa16.12■□□□□ 0.17
CHD3-215ENST00000572750 DFFAO00273 331 aa16.12■□□□□ 0.17
CHD3-215ENST00000572750 PJA2O43164 708 aa16.12■□□□□ 0.17
CHD3-215ENST00000572750 KDELR3O43731 214 aa16.12■□□□□ 0.17
CHD3-215ENST00000572750 CD160O95971 181 aa16.12■□□□□ 0.17
CHD3-215ENST00000572750 KRT1P04264 644 aa16.12■□□□□ 0.17
CHD3-215ENST00000572750 IL4RP24394 825 aa16.12■□□□□ 0.17
CHD3-215ENST00000572750 SLC1A1P43005 524 aa16.12■□□□□ 0.17
CHD3-215ENST00000572750 TPMTP51580 245 aa16.12■□□□□ 0.17
CHD3-215ENST00000572750 CLCN6P51797 869 aa16.12■□□□□ 0.17
CHD3-215ENST00000572750 YBEYP58557 167 aaPredicted RBP16.12■□□□□ 0.17
CHD3-215ENST00000572750 SERINC3Q13530 473 aa16.12■□□□□ 0.17
CHD3-215ENST00000572750 AFMIDQ63HM1 303 aa16.12■□□□□ 0.17
CHD3-215ENST00000572750 TMCO3Q6UWJ1 677 aa16.12■□□□□ 0.17
CHD3-215ENST00000572750 ARHGAP36Q6ZRI8 547 aa16.12■□□□□ 0.17
CHD3-215ENST00000572750 DAAM2Q86T65 1068 aa16.12■□□□□ 0.17
CHD3-215ENST00000572750 MMAAQ8IVH4 418 aaKnown RBP16.12■□□□□ 0.17
CHD3-215ENST00000572750 TPCN2Q8NHX9 752 aa16.12■□□□□ 0.17
CHD3-215ENST00000572750 RAPGEF5Q92565 580 aa16.12■□□□□ 0.17
CHD3-215ENST00000572750 ZNF670Q9BS34 389 aa16.12■□□□□ 0.17
CHD3-215ENST00000572750 DONSONQ9NYP3 566 aa16.12■□□□□ 0.17
CHD3-215ENST00000572750 USP36Q9P275 1121 aaKnown RBP16.12■□□□□ 0.17
CHD3-215ENST00000572750 RCOR3Q9P2K3 495 aaPredicted RBP16.12■□□□□ 0.17
CHD3-215ENST00000572750 THADAQ6YHU6 1953 aa16.12■□□□□ 0.17
CHD3-215ENST00000572750 FLNBO75369 2602 aaKnown RBP16.12■□□□□ 0.17
CHD3-215ENST00000572750 SHROOM3Q8TF72 1996 aa16.11■□□□□ 0.17
CHD3-215ENST00000572750 MACROD2A1Z1Q3 448 aa16.11■□□□□ 0.17
CHD3-215ENST00000572750 BTNL10A8MVZ5 291 aa16.11■□□□□ 0.17
CHD3-215ENST00000572750 MID1O15344 667 aa16.11■□□□□ 0.17
CHD3-215ENST00000572750 ARHGAP6O43182 974 aa16.11■□□□□ 0.17
CHD3-215ENST00000572750 MFSD11O43934 449 aa16.11■□□□□ 0.17
CHD3-215ENST00000572750 ZNF217O75362 1048 aa16.11■□□□□ 0.17
CHD3-215ENST00000572750 ZNF821O75541 412 aaPredicted RBP16.11■□□□□ 0.17
CHD3-215ENST00000572750 DNTTP04053 509 aa16.11■□□□□ 0.17
CHD3-215ENST00000572750 ACADMP11310 421 aa16.11■□□□□ 0.17
CHD3-215ENST00000572750 MARCKSL1P49006 195 aa16.11■□□□□ 0.17
CHD3-215ENST00000572750 PAPOLAP51003 745 aaKnown RBP16.11■□□□□ 0.17
CHD3-215ENST00000572750 METAP1P53582 386 aa16.11■□□□□ 0.17
CHD3-215ENST00000572750 NAP1L1P55209 391 aaKnown RBP16.11■□□□□ 0.17
CHD3-215ENST00000572750 CCZ1BP86790 482 aa16.11■□□□□ 0.17
CHD3-215ENST00000572750 CCZ1P86791 482 aaPredicted RBP16.11■□□□□ 0.17
CHD3-215ENST00000572750 PDK2Q15119 407 aa16.11■□□□□ 0.17
CHD3-215ENST00000572750 CST6Q15828 149 aa16.11■□□□□ 0.17
CHD3-215ENST00000572750 POM121L1PQ3SYA9 428 aa16.11■□□□□ 0.17
CHD3-215ENST00000572750 ANKRD20A8PQ5CZ79 823 aa16.11■□□□□ 0.17
CHD3-215ENST00000572750 FAM124AQ86V42 546 aa16.11■□□□□ 0.17
CHD3-215ENST00000572750 LRRC8AQ8IWT6 810 aa16.11■□□□□ 0.17
CHD3-215ENST00000572750 RHOT1Q8IXI2 618 aa16.11■□□□□ 0.17
CHD3-215ENST00000572750 OR2A12Q8NGT7 310 aa16.11■□□□□ 0.17
CHD3-215ENST00000572750 PCDH19Q8TAB3 1148 aa16.11■□□□□ 0.17
CHD3-215ENST00000572750 GRIN3AQ8TCU5 1115 aa16.11■□□□□ 0.17
CHD3-215ENST00000572750 FAM129BQ96TA1 746 aa16.11■□□□□ 0.17
CHD3-215ENST00000572750 TM6SF2Q9BZW4 377 aa16.11■□□□□ 0.17
CHD3-215ENST00000572750 PDFQ9HBH1 243 aa16.11■□□□□ 0.17
CHD3-215ENST00000572750 RAB23Q9ULC3 237 aa16.11■□□□□ 0.17
CHD3-215ENST00000572750 ALG6Q9Y672 507 aa16.11■□□□□ 0.17
CHD3-215ENST00000572750 DYNC1LI1Q9Y6G9 523 aaKnown RBP16.11■□□□□ 0.17
CHD3-215ENST00000572750 ABCA7Q8IZY2 2146 aa16.1■□□□□ 0.17
CHD3-215ENST00000572750 ASH1LQ9NR48 2969 aaKnown RBP16.1■□□□□ 0.17
CHD3-215ENST00000572750 ZSCAN5CA6NGD5 496 aaPredicted RBP16.1■□□□□ 0.17
CHD3-215ENST00000572750 ARHGAP42A6NI28 874 aa16.1■□□□□ 0.17
CHD3-215ENST00000572750 J3KR12 359 aa16.1■□□□□ 0.17
CHD3-215ENST00000572750 PSTPIP1O43586 416 aa16.1■□□□□ 0.17
CHD3-215ENST00000572750 RNASEH1O60930 286 aaKnown RBP16.1■□□□□ 0.17
CHD3-215ENST00000572750 TMCC1O94876 653 aa16.1■□□□□ 0.17
CHD3-215ENST00000572750 IL1BP01584 269 aa16.1■□□□□ 0.17
CHD3-215ENST00000572750 GEMIN4P57678 1058 aaKnown RBP16.1■□□□□ 0.17
CHD3-215ENST00000572750 PLK5Q496M5 336 aa16.1■□□□□ 0.17
CHD3-215ENST00000572750 LRRC38Q5VT99 294 aa16.1■□□□□ 0.17
CHD3-215ENST00000572750 NCBP2-AS2Q69YL0 99 aa16.1■□□□□ 0.17
CHD3-215ENST00000572750 ARMCX6Q7L4S7 300 aa16.1■□□□□ 0.17
CHD3-215ENST00000572750 CHST14Q8NCH0 376 aa16.1■□□□□ 0.17
CHD3-215ENST00000572750 OR8D1Q8WZ84 308 aa16.1■□□□□ 0.17
CHD3-215ENST00000572750 FAF2Q96CS3 445 aa16.1■□□□□ 0.17
CHD3-215ENST00000572750 CEP44Q9C0F1 390 aa16.1■□□□□ 0.17
CHD3-215ENST00000572750 DUSP15Q9H1R2 295 aaPredicted RBP16.1■□□□□ 0.17
CHD3-215ENST00000572750 PABPC3Q9H361 631 aaKnown RBP16.1■□□□□ 0.17
CHD3-215ENST00000572750 SP110Q9HB58 689 aa16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms