RNA–Protein interactions for RNA: ENST00000571442.5

SMG6-209, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 588 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-209ENST00000571442 BTNL10A8MVZ5 291 aa7.12□□□□□ -1.27
SMG6-209ENST00000571442 C10orf142B7Z368 130 aa7.12□□□□□ -1.27
SMG6-209ENST00000571442 DFFAO00273 331 aa7.12□□□□□ -1.27
SMG6-209ENST00000571442 DAPK3O43293 454 aa7.12□□□□□ -1.27
SMG6-209ENST00000571442 PRAMEF11O60813 436 aa7.12□□□□□ -1.27
SMG6-209ENST00000571442 ALDH1A2O94788 518 aa7.12□□□□□ -1.27
SMG6-209ENST00000571442 TMCC1O94876 653 aa7.12□□□□□ -1.27
SMG6-209ENST00000571442 KRT1P04264 644 aa7.12□□□□□ -1.27
SMG6-209ENST00000571442 DESP17661 470 aa7.12□□□□□ -1.27
SMG6-209ENST00000571442 TGM1P22735 817 aa7.12□□□□□ -1.27
SMG6-209ENST00000571442 ACSL1P33121 698 aa7.12□□□□□ -1.27
SMG6-209ENST00000571442 HTR7P34969 479 aa7.12□□□□□ -1.27
SMG6-209ENST00000571442 DRD3P35462 400 aa7.12□□□□□ -1.27
SMG6-209ENST00000571442 PTGER3P43115 390 aa7.12□□□□□ -1.27
SMG6-209ENST00000571442 PSMD8P48556 350 aa7.12□□□□□ -1.27
SMG6-209ENST00000571442 TPMTP51580 245 aa7.12□□□□□ -1.27
SMG6-209ENST00000571442 NDST2P52849 883 aa7.12□□□□□ -1.27
SMG6-209ENST00000571442 NRLP54845 237 aa7.12□□□□□ -1.27
SMG6-209ENST00000571442 YBEYP58557 167 aaPredicted RBP7.12□□□□□ -1.27
SMG6-209ENST00000571442 KRT83P78385 493 aa7.12□□□□□ -1.27
SMG6-209ENST00000571442 GBE1Q04446 702 aa7.12□□□□□ -1.27
SMG6-209ENST00000571442 IHHQ14623 411 aa7.12□□□□□ -1.27
SMG6-209ENST00000571442 PAFAH1B3Q15102 231 aaKnown RBP7.12□□□□□ -1.27
SMG6-209ENST00000571442 CST6Q15828 149 aa7.12□□□□□ -1.27
SMG6-209ENST00000571442 TAZQ16635 292 aa7.12□□□□□ -1.27
SMG6-209ENST00000571442 HADHQ16836 314 aaKnown RBP7.12□□□□□ -1.27
SMG6-209ENST00000571442 ANKRD20A8PQ5CZ79 823 aa7.12□□□□□ -1.27
SMG6-209ENST00000571442 PMS2CLQ68D20 193 aa7.12□□□□□ -1.27
SMG6-209ENST00000571442 C11orf63Q6NUN7 778 aa7.12□□□□□ -1.27
SMG6-209ENST00000571442 MFSD7Q6UXD7 560 aa7.12□□□□□ -1.27
SMG6-209ENST00000571442 NPNTQ6UXI9 565 aa7.12□□□□□ -1.27
SMG6-209ENST00000571442 DPY19L3Q6ZPD9 716 aa7.12□□□□□ -1.27
SMG6-209ENST00000571442 B4GALNT4Q76KP1 1039 aa7.12□□□□□ -1.27
SMG6-209ENST00000571442 ARMCX6Q7L4S7 300 aa7.12□□□□□ -1.27
SMG6-209ENST00000571442 KIAA1328Q86T90 577 aa7.12□□□□□ -1.27
SMG6-209ENST00000571442 FAM124AQ86V42 546 aa7.12□□□□□ -1.27
SMG6-209ENST00000571442 TMEFF1Q8IYR6 380 aa7.12□□□□□ -1.27
SMG6-209ENST00000571442 PGBD5Q8N414 524 aa7.12□□□□□ -1.27
SMG6-209ENST00000571442 PLD5Q8N7P1 536 aa7.12□□□□□ -1.27
SMG6-209ENST00000571442 KCTD6Q8NC69 237 aa7.12□□□□□ -1.27
SMG6-209ENST00000571442 PRCCQ92733 491 aaPredicted RBP7.12□□□□□ -1.27
SMG6-209ENST00000571442 ARRDC3Q96B67 414 aa7.12□□□□□ -1.27
SMG6-209ENST00000571442 TOE1Q96GM8 510 aaKnown RBP7.12□□□□□ -1.27
SMG6-209ENST00000571442 PDLIM2Q96JY6 352 aa7.12□□□□□ -1.27
SMG6-209ENST00000571442 EXOC2Q96KP1 924 aa7.12□□□□□ -1.27
SMG6-209ENST00000571442 NCAPGQ9BPX3 1015 aa7.12□□□□□ -1.27
SMG6-209ENST00000571442 ZNF670Q9BS34 389 aa7.12□□□□□ -1.27
SMG6-209ENST00000571442 C2orf49Q9BVC5 232 aaPredicted RBP7.12□□□□□ -1.27
SMG6-209ENST00000571442 CALN1Q9BXU9 219 aa7.12□□□□□ -1.27
SMG6-209ENST00000571442 PABPC3Q9H361 631 aaKnown RBP7.12□□□□□ -1.27
SMG6-209ENST00000571442 SEMA4AQ9H3S1 761 aa7.12□□□□□ -1.27
SMG6-209ENST00000571442 RETREG1Q9H6L5 497 aa7.12□□□□□ -1.27
SMG6-209ENST00000571442 PARD6AQ9NPB6 346 aa7.12□□□□□ -1.27
SMG6-209ENST00000571442 ITM2CQ9NQX7 267 aa7.12□□□□□ -1.27
SMG6-209ENST00000571442 WSB2Q9NYS7 404 aaPredicted RBP7.12□□□□□ -1.27
SMG6-209ENST00000571442 SUN2Q9UH99 717 aa7.12□□□□□ -1.27
SMG6-209ENST00000571442 PPM1HQ9ULR3 514 aa7.12□□□□□ -1.27
SMG6-209ENST00000571442 PACSIN2Q9UNF0 486 aaPredicted RBP7.12□□□□□ -1.27
SMG6-209ENST00000571442 WASF2Q9Y6W5 498 aa7.12□□□□□ -1.27
SMG6-209ENST00000571442 PLXNA2O75051 1894 aa7.12□□□□□ -1.27
SMG6-209ENST00000571442 FRYLO94915 3013 aa7.12□□□□□ -1.27
SMG6-209ENST00000571442 ADAMTS9Q9P2N4 1935 aa7.11□□□□□ -1.27
SMG6-209ENST00000571442 DNAH14Q0VDD8 3507 aa7.11□□□□□ -1.27
SMG6-209ENST00000571442 MCF2LO15068 1137 aa7.11□□□□□ -1.27
SMG6-209ENST00000571442 DDX3YO15523 660 aaKnown RBP7.11□□□□□ -1.27
SMG6-209ENST00000571442 ARHGAP6O43182 974 aa7.11□□□□□ -1.27
SMG6-209ENST00000571442 SPOPO43791 374 aa7.11□□□□□ -1.27
SMG6-209ENST00000571442 MAFKO60675 156 aa7.11□□□□□ -1.27
SMG6-209ENST00000571442 PALMO75781 387 aa7.11□□□□□ -1.27
SMG6-209ENST00000571442 FTCDO95954 541 aa7.11□□□□□ -1.27
SMG6-209ENST00000571442 IGLV3-19P01714 112 aa7.11□□□□□ -1.27
SMG6-209ENST00000571442 KRT7P08729 469 aa7.11□□□□□ -1.27
SMG6-209ENST00000571442 KRT10P13645 584 aa7.11□□□□□ -1.27
SMG6-209ENST00000571442 CHRNA3P32297 505 aa7.11□□□□□ -1.27
SMG6-209ENST00000571442 SLC8A1P32418 973 aa7.11□□□□□ -1.27
SMG6-209ENST00000571442 CNR2P34972 360 aa7.11□□□□□ -1.27
SMG6-209ENST00000571442 ETFBP38117 255 aa7.11□□□□□ -1.27
SMG6-209ENST00000571442 ARL4AP40617 200 aa7.11□□□□□ -1.27
SMG6-209ENST00000571442 CDKN2BP42772 138 aa7.11□□□□□ -1.27
SMG6-209ENST00000571442 SLC1A1P43005 524 aa7.11□□□□□ -1.27
SMG6-209ENST00000571442 CLCN6P51797 869 aa7.11□□□□□ -1.27
SMG6-209ENST00000571442 CCNHP51946 323 aaPredicted RBP7.11□□□□□ -1.27
SMG6-209ENST00000571442 TAS2R38P59533 333 aa7.11□□□□□ -1.27
SMG6-209ENST00000571442 SLC10A7Q0GE19 358 aa7.11□□□□□ -1.27
SMG6-209ENST00000571442 ELAVL3Q14576 367 aaKnown RBP7.11□□□□□ -1.27
SMG6-209ENST00000571442 PARP15Q460N3 678 aa7.11□□□□□ -1.27
SMG6-209ENST00000571442 USP39Q53GS9 565 aaKnown RBP7.11□□□□□ -1.27
SMG6-209ENST00000571442 CARD16Q5EG05 197 aa7.11□□□□□ -1.27
SMG6-209ENST00000571442 ARSIQ5FYB1 569 aa7.11□□□□□ -1.27
SMG6-209ENST00000571442 LRRC38Q5VT99 294 aa7.11□□□□□ -1.27
SMG6-209ENST00000571442 DCAF12L1Q5VU92 463 aa7.11□□□□□ -1.27
SMG6-209ENST00000571442 ZNF776Q68DI1 518 aaPredicted RBP7.11□□□□□ -1.27
SMG6-209ENST00000571442 SLC9A4Q6AI14 798 aa7.11□□□□□ -1.27
SMG6-209ENST00000571442 TMCO3Q6UWJ1 677 aa7.11□□□□□ -1.27
SMG6-209ENST00000571442 CEP68Q76N32 757 aa7.11□□□□□ -1.27
SMG6-209ENST00000571442 ERMP1Q7Z2K6 904 aa7.11□□□□□ -1.27
SMG6-209ENST00000571442 METTL3Q86U44 580 aaKnown RBP7.11□□□□□ -1.27
SMG6-209ENST00000571442 NT5DC3Q86UY8 548 aa7.11□□□□□ -1.27
SMG6-209ENST00000571442 ZNF354CQ86Y25 554 aa7.11□□□□□ -1.27
SMG6-209ENST00000571442 RHOT1Q8IXI2 618 aa7.11□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms