RNA–Protein interactions for RNA: ENST00000571252.2

PCDHGA4-201, Transcript of protocadherin gamma subfamily A, 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGA4, Length 4,778 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA4-201ENST00000571252 PCID2Q5JVF3 399 aa11.28□□□□□ -0.6
PCDHGA4-201ENST00000571252 CATSPERGQ6ZRH7 1159 aa11.28□□□□□ -0.6
PCDHGA4-201ENST00000571252 YAF2Q8IY57 180 aa11.28□□□□□ -0.6
PCDHGA4-201ENST00000571252 SPAG4Q9NPE6 437 aa11.28□□□□□ -0.6
PCDHGA4-201ENST00000571252 OR12D3Q9UGF7 316 aa11.28□□□□□ -0.6
PCDHGA4-201ENST00000571252 POMPQ9Y244 141 aa11.28□□□□□ -0.6
PCDHGA4-201ENST00000571252 VPS9D1Q9Y2B5 631 aa11.28□□□□□ -0.6
PCDHGA4-201ENST00000571252 TRAFD1O14545 582 aaPredicted RBP11.28□□□□□ -0.6
PCDHGA4-201ENST00000571252 DHX15O43143 795 aaKnown RBP11.28□□□□□ -0.6
PCDHGA4-201ENST00000571252 ODC1P11926 461 aa11.28□□□□□ -0.6
PCDHGA4-201ENST00000571252 HNRNPLP14866 589 aaKnown RBP eCLIP11.28□□□□□ -0.64e-10■■■■■ 68.5
PCDHGA4-201ENST00000571252 MSS51Q4VC12 460 aa11.28□□□□□ -0.6
PCDHGA4-201ENST00000571252 DSELQ8IZU8 1212 aa11.28□□□□□ -0.6
PCDHGA4-201ENST00000571252 ZNF483Q8TF39 744 aaPredicted RBP11.28□□□□□ -0.6
PCDHGA4-201ENST00000571252 DDX1Q92499 740 aaKnown RBP11.28□□□□□ -0.6
PCDHGA4-201ENST00000571252 DYRK4Q9NR20 520 aa11.28□□□□□ -0.6
PCDHGA4-201ENST00000571252 GNEQ9Y223 722 aaKnown RBP11.28□□□□□ -0.6
PCDHGA4-201ENST00000571252 CNTNAP2Q9UHC6 1331 aa11.28□□□□□ -0.6
PCDHGA4-201ENST00000571252 EP400Q96L91 3159 aa11.28□□□□□ -0.6
PCDHGA4-201ENST00000571252 HIST1H2AGP0C0S8 130 aaPredicted RBP11.28□□□□□ -0.6
PCDHGA4-201ENST00000571252 CCDC166P0CW27 439 aa11.28□□□□□ -0.6
PCDHGA4-201ENST00000571252 HIST1H2ADP20671 130 aa11.28□□□□□ -0.6
PCDHGA4-201ENST00000571252 IL1R2P27930 398 aa11.28□□□□□ -0.6
PCDHGA4-201ENST00000571252 ARL2P36404 184 aa11.28□□□□□ -0.6
PCDHGA4-201ENST00000571252 PSMD7P51665 324 aa11.28□□□□□ -0.6
PCDHGA4-201ENST00000571252 FCGRTP55899 365 aa11.28□□□□□ -0.6
PCDHGA4-201ENST00000571252 CTBP1Q13363 440 aa11.28□□□□□ -0.6
PCDHGA4-201ENST00000571252 C10orf120Q5SQS8 335 aa11.28□□□□□ -0.6
PCDHGA4-201ENST00000571252 ANKS6Q68DC2 871 aa11.28□□□□□ -0.6
PCDHGA4-201ENST00000571252 FAM117BQ6P1L5 589 aa11.28□□□□□ -0.6
PCDHGA4-201ENST00000571252 SPATA6LQ8N4H0 392 aa11.28□□□□□ -0.6
PCDHGA4-201ENST00000571252 C1orf127Q8N9H9 656 aa11.28□□□□□ -0.6
PCDHGA4-201ENST00000571252 NAT14Q8WUY8 206 aa11.28□□□□□ -0.6
PCDHGA4-201ENST00000571252 HIST1H2AHQ96KK5 128 aa11.28□□□□□ -0.6
PCDHGA4-201ENST00000571252 FIZ1Q96SL8 496 aa11.28□□□□□ -0.6
PCDHGA4-201ENST00000571252 NPAS2Q99743 824 aa11.28□□□□□ -0.6
PCDHGA4-201ENST00000571252 HIST1H2AJQ99878 128 aa11.28□□□□□ -0.6
PCDHGA4-201ENST00000571252 H2AFJQ9BTM1 129 aa11.28□□□□□ -0.6
PCDHGA4-201ENST00000571252 ACSS2Q9NR19 701 aa11.28□□□□□ -0.6
PCDHGA4-201ENST00000571252 TMEM216Q9P0N5 145 aa11.28□□□□□ -0.6
PCDHGA4-201ENST00000571252 PRKAG3Q9UGI9 489 aa11.28□□□□□ -0.6
PCDHGA4-201ENST00000571252 RSL24D1Q9UHA3 163 aaKnown RBP11.28□□□□□ -0.6
PCDHGA4-201ENST00000571252 UGT1A9O60656 530 aa11.28□□□□□ -0.6
PCDHGA4-201ENST00000571252 MATKP42679 507 aa11.28□□□□□ -0.6
PCDHGA4-201ENST00000571252 RENBPP51606 427 aa11.28□□□□□ -0.6
PCDHGA4-201ENST00000571252 RAD23AP54725 363 aa11.28□□□□□ -0.6
PCDHGA4-201ENST00000571252 AQP4P55087 323 aa11.28□□□□□ -0.6
PCDHGA4-201ENST00000571252 TRAF2Q12933 501 aa11.28□□□□□ -0.6
PCDHGA4-201ENST00000571252 NR6A1Q15406 480 aa11.28□□□□□ -0.6
PCDHGA4-201ENST00000571252 FAM182AQ5T1J6 154 aa11.28□□□□□ -0.6
PCDHGA4-201ENST00000571252 LRRC8DQ7L1W4 858 aa11.28□□□□□ -0.6
PCDHGA4-201ENST00000571252 EZH1Q92800 747 aaPredicted RBP11.28□□□□□ -0.6
PCDHGA4-201ENST00000571252 GLMNQ92990 594 aa11.28□□□□□ -0.6
PCDHGA4-201ENST00000571252 OSBPL11Q9BXB4 747 aa11.28□□□□□ -0.6
PCDHGA4-201ENST00000571252 GPR63Q9BZJ6 419 aa11.28□□□□□ -0.6
PCDHGA4-201ENST00000571252 ZNF395Q9H8N7 513 aaPredicted RBP11.28□□□□□ -0.6
PCDHGA4-201ENST00000571252 UGT1A7Q9HAW7 530 aa11.28□□□□□ -0.6
PCDHGA4-201ENST00000571252 UGT1A10Q9HAW8 530 aa11.28□□□□□ -0.6
PCDHGA4-201ENST00000571252 UGT1A8Q9HAW9 530 aa11.28□□□□□ -0.6
PCDHGA4-201ENST00000571252 LSM7Q9UK45 103 aaKnown RBP11.28□□□□□ -0.6
PCDHGA4-201ENST00000571252 LTBP4Q8N2S1 1624 aa11.28□□□□□ -0.6
PCDHGA4-201ENST00000571252 THP07101 528 aa11.27□□□□□ -0.6
PCDHGA4-201ENST00000571252 USP17L7P0C7H9 530 aa11.27□□□□□ -0.6
PCDHGA4-201ENST00000571252 AKT1P31749 480 aa11.27□□□□□ -0.6
PCDHGA4-201ENST00000571252 PSEN1P49768 467 aa11.27□□□□□ -0.6
PCDHGA4-201ENST00000571252 CPT1AP50416 773 aa11.27□□□□□ -0.6
PCDHGA4-201ENST00000571252 CELF3Q5SZQ8 465 aaKnown RBP11.27□□□□□ -0.6
PCDHGA4-201ENST00000571252 TFAP2DQ7Z6R9 452 aa11.27□□□□□ -0.6
PCDHGA4-201ENST00000571252 FAM228AQ86W67 206 aa11.27□□□□□ -0.6
PCDHGA4-201ENST00000571252 HORMAD1Q86X24 394 aa11.27□□□□□ -0.6
PCDHGA4-201ENST00000571252 RELL1Q8IUW5 271 aa11.27□□□□□ -0.6
PCDHGA4-201ENST00000571252 CROCCP3Q8IVE0 287 aa11.27□□□□□ -0.6
PCDHGA4-201ENST00000571252 FBXO39Q8N4B4 442 aa11.27□□□□□ -0.6
PCDHGA4-201ENST00000571252 KLHL25Q9H0H3 589 aa11.27□□□□□ -0.6
PCDHGA4-201ENST00000571252 ENTPD7Q9NQZ7 604 aa11.27□□□□□ -0.6
PCDHGA4-201ENST00000571252 GALNT8Q9NY28 637 aa11.27□□□□□ -0.6
PCDHGA4-201ENST00000571252 EIF3LQ9Y262 564 aaKnown RBP11.27□□□□□ -0.6
PCDHGA4-201ENST00000571252 ALDH1A1P00352 501 aa11.27□□□□□ -0.61
PCDHGA4-201ENST00000571252 TTKP33981 857 aa11.27□□□□□ -0.61
PCDHGA4-201ENST00000571252 RAB10P61026 200 aa11.27□□□□□ -0.61
PCDHGA4-201ENST00000571252 FAM98BQ52LJ0 330 aaKnown RBP11.27□□□□□ -0.61
PCDHGA4-201ENST00000571252 UBAP2Q5T6F2 1119 aaKnown RBP11.27□□□□□ -0.61
PCDHGA4-201ENST00000571252 DCP1BQ8IZD4 617 aaKnown RBP11.27□□□□□ -0.61
PCDHGA4-201ENST00000571252 ATP6V0D2Q8N8Y2 350 aa11.27□□□□□ -0.61
PCDHGA4-201ENST00000571252 CMASQ8NFW8 434 aaPredicted RBP11.27□□□□□ -0.61
PCDHGA4-201ENST00000571252 MAGEE2Q8TD90 523 aaPredicted RBP11.27□□□□□ -0.61
PCDHGA4-201ENST00000571252 BTBD9Q96Q07 612 aa11.27□□□□□ -0.61
PCDHGA4-201ENST00000571252 ALG9Q9H6U8 611 aa11.27□□□□□ -0.61
PCDHGA4-201ENST00000571252 DNAJC28Q9NX36 388 aa11.27□□□□□ -0.61
PCDHGA4-201ENST00000571252 DMTF1Q9Y222 760 aa11.27□□□□□ -0.61
PCDHGA4-201ENST00000571252 CRYL1Q9Y2S2 319 aa11.27□□□□□ -0.61
PCDHGA4-201ENST00000571252 MYH11P35749 1972 aa11.27□□□□□ -0.61
PCDHGA4-201ENST00000571252 C2orf81A6NN90 581 aa11.27□□□□□ -0.61
PCDHGA4-201ENST00000571252 TYROBPO43914 113 aa11.27□□□□□ -0.61
PCDHGA4-201ENST00000571252 OCM2P0CE71 109 aa11.27□□□□□ -0.61
PCDHGA4-201ENST00000571252 OCMP0CE72 109 aaPredicted RBP11.27□□□□□ -0.61
PCDHGA4-201ENST00000571252 TSPAN8P19075 237 aa11.27□□□□□ -0.61
PCDHGA4-201ENST00000571252 EPHX2P34913 555 aa11.27□□□□□ -0.61
PCDHGA4-201ENST00000571252 SQLEQ14534 574 aa11.27□□□□□ -0.61
PCDHGA4-201ENST00000571252 CERCAMQ5T4B2 595 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms