RNA–Protein interactions for RNA: ENST00000571018.5

TVP23B-204, Transcript of trans-golgi network vesicle protein 23 homolog B, humanhuman

TSL 2

Gene TVP23B, Length 718 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23B-204ENST00000571018 ZNF292O60281 2723 aa12.93□□□□□ -0.34
TVP23B-204ENST00000571018 C10orf142B7Z368 130 aa12.93□□□□□ -0.34
TVP23B-204ENST00000571018 C1QTNF3-AMACRE9PGA6 284 aa12.93□□□□□ -0.34
TVP23B-204ENST00000571018 CDX4O14627 284 aaPredicted RBP12.93□□□□□ -0.34
TVP23B-204ENST00000571018 TM4SF5O14894 197 aa12.93□□□□□ -0.34
TVP23B-204ENST00000571018 KDELR3O43731 214 aa12.93□□□□□ -0.34
TVP23B-204ENST00000571018 BNIP3LO60238 219 aa12.93□□□□□ -0.34
TVP23B-204ENST00000571018 ZNF821O75541 412 aaPredicted RBP12.93□□□□□ -0.34
TVP23B-204ENST00000571018 CFIP05156 583 aa12.93□□□□□ -0.34
TVP23B-204ENST00000571018 ENGP17813 658 aa12.93□□□□□ -0.34
TVP23B-204ENST00000571018 CHRNA3P32297 505 aa12.93□□□□□ -0.34
TVP23B-204ENST00000571018 DRD3P35462 400 aa12.93□□□□□ -0.34
TVP23B-204ENST00000571018 ZNF135P52742 658 aaPredicted RBP12.93□□□□□ -0.34
TVP23B-204ENST00000571018 ADKP55263 362 aaKnown RBP12.93□□□□□ -0.34
TVP23B-204ENST00000571018 GEMIN4P57678 1058 aaKnown RBP12.93□□□□□ -0.34
TVP23B-204ENST00000571018 TPI1P60174 286 aa12.93□□□□□ -0.34
TVP23B-204ENST00000571018 TBX2Q13207 712 aaPredicted RBP12.93□□□□□ -0.34
TVP23B-204ENST00000571018 PCDH20Q8N6Y1 951 aaKnown RBP12.93□□□□□ -0.34
TVP23B-204ENST00000571018 NIPA2Q8N8Q9 360 aa12.93□□□□□ -0.34
TVP23B-204ENST00000571018 C1orf216Q8TAB5 229 aa12.93□□□□□ -0.34
TVP23B-204ENST00000571018 PIP4K2CQ8TBX8 421 aa12.93□□□□□ -0.34
TVP23B-204ENST00000571018 ISG20Q96AZ6 181 aaKnown RBP12.93□□□□□ -0.34
TVP23B-204ENST00000571018 BIRC7Q96CA5 298 aa12.93□□□□□ -0.34
TVP23B-204ENST00000571018 CHP1Q99653 195 aa12.93□□□□□ -0.34
TVP23B-204ENST00000571018 NUP85Q9BW27 656 aa12.93□□□□□ -0.34
TVP23B-204ENST00000571018 RBSNQ9H1K0 784 aa12.93□□□□□ -0.34
TVP23B-204ENST00000571018 IP6K2Q9UHH9 426 aa12.93□□□□□ -0.34
TVP23B-204ENST00000571018 EIF2B4Q9UI10 523 aaKnown RBP12.93□□□□□ -0.34
TVP23B-204ENST00000571018 ANAPC7Q9UJX3 599 aa12.93□□□□□ -0.34
TVP23B-204ENST00000571018 A0A1B0GTW7 788 aa12.92□□□□□ -0.34
TVP23B-204ENST00000571018 ZSCAN5CA6NGD5 496 aaPredicted RBP12.92□□□□□ -0.34
TVP23B-204ENST00000571018 LRRC72A6NJI9 287 aa12.92□□□□□ -0.34
TVP23B-204ENST00000571018 EEF2KO00418 725 aaKnown RBP12.92□□□□□ -0.34
TVP23B-204ENST00000571018 SLC7A4O43246 635 aa12.92□□□□□ -0.34
TVP23B-204ENST00000571018 CTSLP07711 333 aa12.92□□□□□ -0.34
TVP23B-204ENST00000571018 IL1R2P27930 398 aa12.92□□□□□ -0.34
TVP23B-204ENST00000571018 RECQLP46063 649 aaPredicted RBP12.92□□□□□ -0.34
TVP23B-204ENST00000571018 HCAR3P49019 387 aa12.92□□□□□ -0.34
TVP23B-204ENST00000571018 METAP1P53582 386 aa12.92□□□□□ -0.34
TVP23B-204ENST00000571018 ADPRHP54922 357 aa12.92□□□□□ -0.34
TVP23B-204ENST00000571018 PARP15Q460N3 678 aa12.92□□□□□ -0.34
TVP23B-204ENST00000571018 BOLA3Q53S33 107 aa12.92□□□□□ -0.34
TVP23B-204ENST00000571018 DAB2IPQ5VWQ8 1189 aa12.92□□□□□ -0.34
TVP23B-204ENST00000571018 KIAA0895LQ68EN5 471 aa12.92□□□□□ -0.34
TVP23B-204ENST00000571018 NCEH1Q6PIU2 408 aa12.92□□□□□ -0.34
TVP23B-204ENST00000571018 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP12.92□□□□□ -0.34
TVP23B-204ENST00000571018 DPY19L3Q6ZPD9 716 aa12.92□□□□□ -0.34
TVP23B-204ENST00000571018 ERMP1Q7Z2K6 904 aa12.92□□□□□ -0.34
TVP23B-204ENST00000571018 DGLUCYQ7Z3D6 616 aa12.92□□□□□ -0.34
TVP23B-204ENST00000571018 CNGA4Q8IV77 575 aa12.92□□□□□ -0.34
TVP23B-204ENST00000571018 CHST14Q8NCH0 376 aa12.92□□□□□ -0.34
TVP23B-204ENST00000571018 TMIEQ8NEW7 156 aa12.92□□□□□ -0.34
TVP23B-204ENST00000571018 OR2T34Q8NGX1 318 aa12.92□□□□□ -0.34
TVP23B-204ENST00000571018 KCTD15Q96SI1 283 aaPredicted RBP12.92□□□□□ -0.34
TVP23B-204ENST00000571018 MIR1-1HGQ9H1L0 117 aa12.92□□□□□ -0.34
TVP23B-204ENST00000571018 TNKS2Q9H2K2 1166 aa12.92□□□□□ -0.34
TVP23B-204ENST00000571018 KDM4CQ9H3R0 1056 aa12.92□□□□□ -0.34
TVP23B-204ENST00000571018 DEF6Q9H4E7 631 aa12.92□□□□□ -0.34
TVP23B-204ENST00000571018 OSGEPQ9NPF4 335 aa12.92□□□□□ -0.34
TVP23B-204ENST00000571018 TMEM9BQ9NQ34 198 aa12.92□□□□□ -0.34
TVP23B-204ENST00000571018 FCF1Q9Y324 198 aaKnown RBP12.92□□□□□ -0.34
TVP23B-204ENST00000571018 ACTL7AQ9Y615 435 aa12.92□□□□□ -0.34
TVP23B-204ENST00000571018 NYNRINQ9P2P1 1898 aaKnown RBP12.91□□□□□ -0.34
TVP23B-204ENST00000571018 FAM47DPA6NHR8 397 aa12.91□□□□□ -0.34
TVP23B-204ENST00000571018 C4orf47A7E2U8 309 aa12.91□□□□□ -0.34
TVP23B-204ENST00000571018 RASA4BC9J798 803 aa12.91□□□□□ -0.34
TVP23B-204ENST00000571018 AKR1B15C9JRZ8 316 aaPredicted RBP12.91□□□□□ -0.34
TVP23B-204ENST00000571018 MYO1FO00160 1098 aa12.91□□□□□ -0.34
TVP23B-204ENST00000571018 ARHGAP33O14559 1287 aa12.91□□□□□ -0.34
TVP23B-204ENST00000571018 BCAT2O15382 392 aaPredicted RBP12.91□□□□□ -0.34
TVP23B-204ENST00000571018 RASA4O43374 803 aa12.91□□□□□ -0.34
TVP23B-204ENST00000571018 AKR1B10O60218 316 aa12.91□□□□□ -0.34
TVP23B-204ENST00000571018 FSBPO95073 299 aa12.91□□□□□ -0.34
TVP23B-204ENST00000571018 PRNPP04156 253 aa12.91□□□□□ -0.34
TVP23B-204ENST00000571018 IGHV4-34P06331 123 aa12.91□□□□□ -0.34
TVP23B-204ENST00000571018 SYPP08247 313 aa12.91□□□□□ -0.34
TVP23B-204ENST00000571018 NUDT7P0C024 238 aa12.91□□□□□ -0.34
TVP23B-204ENST00000571018 H2AFZP0C0S5 128 aa12.91□□□□□ -0.34
TVP23B-204ENST00000571018 TCF4P15884 667 aa12.91□□□□□ -0.34
TVP23B-204ENST00000571018 CD27P26842 260 aa12.91□□□□□ -0.34
TVP23B-204ENST00000571018 NDST2P52849 883 aa12.91□□□□□ -0.34
TVP23B-204ENST00000571018 SERINC3Q13530 473 aa12.91□□□□□ -0.34
TVP23B-204ENST00000571018 DPYSL2Q16555 572 aa12.91□□□□□ -0.34
TVP23B-204ENST00000571018 CARD16Q5EG05 197 aa12.91□□□□□ -0.34
TVP23B-204ENST00000571018 PPP6R3Q5H9R7 873 aaPredicted RBP12.91□□□□□ -0.34
TVP23B-204ENST00000571018 KCNT1Q5JUK3 1230 aa12.91□□□□□ -0.34
TVP23B-204ENST00000571018 RFX8Q6ZV50 586 aa12.91□□□□□ -0.34
TVP23B-204ENST00000571018 H2AFVQ71UI9 128 aa12.91□□□□□ -0.34
TVP23B-204ENST00000571018 ZCCHC9Q8N567 271 aaKnown RBP12.91□□□□□ -0.34
TVP23B-204ENST00000571018 OR14C36Q8NHC7 312 aa12.91□□□□□ -0.34
TVP23B-204ENST00000571018 ZNF564Q8TBZ8 553 aaPredicted RBP12.91□□□□□ -0.34
TVP23B-204ENST00000571018 CASKIN2Q8WXE0 1202 aa12.91□□□□□ -0.34
TVP23B-204ENST00000571018 CTNNBL1Q8WYA6 563 aaPredicted RBP12.91□□□□□ -0.34
TVP23B-204ENST00000571018 HMCESQ96FZ2 354 aa12.91□□□□□ -0.34
TVP23B-204ENST00000571018 BTBD6Q96KE9 485 aa12.91□□□□□ -0.34
TVP23B-204ENST00000571018 CCDC42Q96M95 316 aa12.91□□□□□ -0.34
TVP23B-204ENST00000571018 ORAI3Q9BRQ5 295 aa12.91□□□□□ -0.34
TVP23B-204ENST00000571018 PACSIN1Q9BY11 444 aa12.91□□□□□ -0.34
TVP23B-204ENST00000571018 LRRC19Q9H756 370 aa12.91□□□□□ -0.34
TVP23B-204ENST00000571018 NHEJ1Q9H9Q4 299 aaPredicted RBP12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms