RNA–Protein interactions for RNA: ENST00000569252.5

USB1-215, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 573 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-215ENST00000569252 SYNCRIPO60506 623 aaKnown RBP16.35■□□□□ 0.21
USB1-215ENST00000569252 ZNF189O75820 626 aaPredicted RBP16.35■□□□□ 0.21
USB1-215ENST00000569252 APOC2P02655 101 aa16.35■□□□□ 0.21
USB1-215ENST00000569252 FGGP02679 453 aa16.35■□□□□ 0.21
USB1-215ENST00000569252 ATP5OP48047 213 aa16.35■□□□□ 0.21
USB1-215ENST00000569252 NUMBP49757 651 aa16.35■□□□□ 0.21
USB1-215ENST00000569252 GBE1Q04446 702 aa16.35■□□□□ 0.21
USB1-215ENST00000569252 IL10RBQ08334 325 aa16.35■□□□□ 0.21
USB1-215ENST00000569252 AP1B1Q10567 949 aa16.35■□□□□ 0.21
USB1-215ENST00000569252 HSF5Q4G112 596 aaPredicted RBP16.35■□□□□ 0.21
USB1-215ENST00000569252 TMCO4Q5TGY1 634 aa16.35■□□□□ 0.21
USB1-215ENST00000569252 DCAF12L1Q5VU92 463 aa16.35■□□□□ 0.21
USB1-215ENST00000569252 PAPD7Q5XG87 772 aaKnown RBP16.35■□□□□ 0.21
USB1-215ENST00000569252 AFMIDQ63HM1 303 aa16.35■□□□□ 0.21
USB1-215ENST00000569252 AADACL2Q6P093 401 aa16.35■□□□□ 0.21
USB1-215ENST00000569252 SERPINA13PQ6UXR4 307 aa16.35■□□□□ 0.21
USB1-215ENST00000569252 PRR23BQ6ZRT6 265 aa16.35■□□□□ 0.21
USB1-215ENST00000569252 NYAP1Q6ZVC0 841 aa16.35■□□□□ 0.21
USB1-215ENST00000569252 NPWQ8N729 165 aa16.35■□□□□ 0.21
USB1-215ENST00000569252 OR52K2Q8NGK3 314 aa16.35■□□□□ 0.21
USB1-215ENST00000569252 CASKIN2Q8WXE0 1202 aa16.35■□□□□ 0.21
USB1-215ENST00000569252 ALG14Q96F25 216 aa16.35■□□□□ 0.21
USB1-215ENST00000569252 RPL10LQ96L21 214 aaKnown RBP16.35■□□□□ 0.21
USB1-215ENST00000569252 FRMD8P1Q9BZ68 369 aaPredicted RBP16.35■□□□□ 0.21
USB1-215ENST00000569252 DTLQ9NZJ0 730 aa16.35■□□□□ 0.21
USB1-215ENST00000569252 UBA2Q9UBT2 640 aaPredicted RBP16.35■□□□□ 0.21
USB1-215ENST00000569252 VPS51Q9UID3 782 aa16.35■□□□□ 0.21
USB1-215ENST00000569252 CDV3Q9UKY7 258 aaKnown RBP16.35■□□□□ 0.21
USB1-215ENST00000569252 INTS6Q9UL03 887 aaKnown RBP16.35■□□□□ 0.21
USB1-215ENST00000569252 MFHAS1Q9Y4C4 1052 aa16.35■□□□□ 0.21
USB1-215ENST00000569252 FARP1Q9Y4F1 1045 aaPredicted RBP16.35■□□□□ 0.21
USB1-215ENST00000569252 OR51B4Q9Y5P0 310 aa16.35■□□□□ 0.21
USB1-215ENST00000569252 CNOT1A5YKK6 2376 aaKnown RBP16.34■□□□□ 0.21
USB1-215ENST00000569252 MCF2LO15068 1137 aa16.34■□□□□ 0.21
USB1-215ENST00000569252 GDF9O60383 454 aa16.34■□□□□ 0.21
USB1-215ENST00000569252 SNAP91O60641 907 aa16.34■□□□□ 0.21
USB1-215ENST00000569252 RNF40O75150 1001 aa16.34■□□□□ 0.21
USB1-215ENST00000569252 CHRNB1P11230 501 aa16.34■□□□□ 0.21
USB1-215ENST00000569252 CCNCP24863 283 aa16.34■□□□□ 0.21
USB1-215ENST00000569252 NTSR1P30989 418 aa16.34■□□□□ 0.21
USB1-215ENST00000569252 GARSP41250 739 aaKnown RBP16.34■□□□□ 0.21
USB1-215ENST00000569252 MAGEA9P43362 315 aa16.34■□□□□ 0.21
USB1-215ENST00000569252 RECQLP46063 649 aaPredicted RBP16.34■□□□□ 0.21
USB1-215ENST00000569252 RENBPP51606 427 aa16.34■□□□□ 0.21
USB1-215ENST00000569252 GALNT2Q10471 571 aa16.34■□□□□ 0.21
USB1-215ENST00000569252 CCINQ13939 588 aa16.34■□□□□ 0.21
USB1-215ENST00000569252 RFTN1Q14699 578 aaPredicted RBP16.34■□□□□ 0.21
USB1-215ENST00000569252 EOGTQ5NDL2 527 aa16.34■□□□□ 0.21
USB1-215ENST00000569252 TMEM215Q68D42 235 aa16.34■□□□□ 0.21
USB1-215ENST00000569252 NPNTQ6UXI9 565 aa16.34■□□□□ 0.21
USB1-215ENST00000569252 Q6ZS52 159 aa16.34■□□□□ 0.21
USB1-215ENST00000569252 ADAT2Q7Z6V5 191 aaKnown RBP16.34■□□□□ 0.21
USB1-215ENST00000569252 ZC3H18Q86VM9 953 aaKnown RBP16.34■□□□□ 0.21
USB1-215ENST00000569252 ARHGAP12Q8IWW6 846 aa16.34■□□□□ 0.21
USB1-215ENST00000569252 KDM1BQ8NB78 822 aa16.34■□□□□ 0.21
USB1-215ENST00000569252 NETO2Q8NC67 525 aa16.34■□□□□ 0.21
USB1-215ENST00000569252 TFB1MQ8WVM0 346 aaKnown RBP16.34■□□□□ 0.21
USB1-215ENST00000569252 SORCS1Q8WY21 1168 aa16.34■□□□□ 0.21
USB1-215ENST00000569252 CCDC114Q96M63 670 aa16.34■□□□□ 0.21
USB1-215ENST00000569252 ZNF599Q96NL3 588 aa16.34■□□□□ 0.21
USB1-215ENST00000569252 KLC2Q9H0B6 622 aa16.34■□□□□ 0.21
USB1-215ENST00000569252 NOL6Q9H6R4 1146 aaKnown RBP16.34■□□□□ 0.21
USB1-215ENST00000569252 THAP10Q9P2Z0 257 aaPredicted RBP16.34■□□□□ 0.21
USB1-215ENST00000569252 RNF14Q9UBS8 474 aa16.34■□□□□ 0.21
USB1-215ENST00000569252 GOLGA6L10A0A0M3HER8 536 aa16.33■□□□□ 0.2
USB1-215ENST00000569252 HACD1B0YJ81 288 aa16.33■□□□□ 0.2
USB1-215ENST00000569252 CHURC1-FNTBB4DL54 471 aa16.33■□□□□ 0.2
USB1-215ENST00000569252 PGRMC1O00264 195 aaKnown RBP16.33■□□□□ 0.2
USB1-215ENST00000569252 PRAMEF11O60813 436 aa16.33■□□□□ 0.2
USB1-215ENST00000569252 MAP3K6O95382 1288 aa16.33■□□□□ 0.2
USB1-215ENST00000569252 HNRNPLP14866 589 aaKnown RBP eCLIP16.33■□□□□ 0.2
USB1-215ENST00000569252 FNTBP49356 437 aa16.33■□□□□ 0.2
USB1-215ENST00000569252 CLCN6P51797 869 aa16.33■□□□□ 0.2
USB1-215ENST00000569252 EIF3EP60228 445 aaKnown RBP16.33■□□□□ 0.2
USB1-215ENST00000569252 OTUD4Q01804 1114 aaKnown RBP16.33■□□□□ 0.2
USB1-215ENST00000569252 ZNF33AQ06730 810 aa16.33■□□□□ 0.2
USB1-215ENST00000569252 MESP2Q0VG99 397 aa16.33■□□□□ 0.2
USB1-215ENST00000569252 XRCC4Q13426 336 aa16.33■□□□□ 0.2
USB1-215ENST00000569252 ZNF234Q14588 700 aa16.33■□□□□ 0.2
USB1-215ENST00000569252 STARD3Q14849 445 aa16.33■□□□□ 0.2
USB1-215ENST00000569252 CCDC6Q16204 474 aa16.33■□□□□ 0.2
USB1-215ENST00000569252 INO80DQ53TQ3 878 aaPredicted RBP16.33■□□□□ 0.2
USB1-215ENST00000569252 EMC10Q5UCC4 262 aa16.33■□□□□ 0.2
USB1-215ENST00000569252 MARC1Q5VT66 337 aa16.33■□□□□ 0.2
USB1-215ENST00000569252 HEATR6Q6AI08 1181 aaKnown RBP16.33■□□□□ 0.2
USB1-215ENST00000569252 DARS2Q6PI48 645 aaKnown RBP16.33■□□□□ 0.2
USB1-215ENST00000569252 LINGO4Q6UY18 593 aa16.33■□□□□ 0.2
USB1-215ENST00000569252 CCDC13Q8IYE1 715 aa16.33■□□□□ 0.2
USB1-215ENST00000569252 CCDC33Q8N5R6 958 aa16.33■□□□□ 0.2
USB1-215ENST00000569252 RPLP0P6Q8NHW5 317 aa16.33■□□□□ 0.2
USB1-215ENST00000569252 KIF18AQ8NI77 898 aa16.33■□□□□ 0.2
USB1-215ENST00000569252 SAE1Q9UBE0 346 aaPredicted RBP16.33■□□□□ 0.2
USB1-215ENST00000569252 LOC105378220A0A1B0GUY1 285 aaPredicted RBP16.32■□□□□ 0.2
USB1-215ENST00000569252 J3KR12 359 aa16.32■□□□□ 0.2
USB1-215ENST00000569252 MTSS1O43312 755 aa16.32■□□□□ 0.2
USB1-215ENST00000569252 STK10O94804 968 aaKnown RBP16.32■□□□□ 0.2
USB1-215ENST00000569252 KLF8O95600 359 aaPredicted RBP16.32■□□□□ 0.2
USB1-215ENST00000569252 GLDCP23378 1020 aa16.32■□□□□ 0.2
USB1-215ENST00000569252 CTSOP43234 321 aaPredicted RBP16.32■□□□□ 0.2
USB1-215ENST00000569252 VASPP50552 380 aaPredicted RBP16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms