RNA–Protein interactions for RNA: ENST00000568877.5

COMMD4-224, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 770 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-224ENST00000568877 C9orf64Q5T6V5 341 aa17.05■□□□□ 0.32
COMMD4-224ENST00000568877 TIGD7Q6NT04 549 aaPredicted RBP17.05■□□□□ 0.32
COMMD4-224ENST00000568877 KIAA1211LQ6NV74 962 aa17.05■□□□□ 0.32
COMMD4-224ENST00000568877 C22orf39Q6P5X5 142 aa17.05■□□□□ 0.32
COMMD4-224ENST00000568877 PCDH20Q8N6Y1 951 aaKnown RBP17.05■□□□□ 0.32
COMMD4-224ENST00000568877 LRRN4Q8WUT4 740 aa17.05■□□□□ 0.32
COMMD4-224ENST00000568877 NSMCE1Q8WV22 266 aa17.05■□□□□ 0.32
COMMD4-224ENST00000568877 PTPRN2Q92932 1015 aa17.05■□□□□ 0.32
COMMD4-224ENST00000568877 FATE1Q969F0 183 aa17.05■□□□□ 0.32
COMMD4-224ENST00000568877 ISG20Q96AZ6 181 aaKnown RBP17.05■□□□□ 0.32
COMMD4-224ENST00000568877 LGMNQ99538 433 aa17.05■□□□□ 0.32
COMMD4-224ENST00000568877 NAPGQ99747 312 aaPredicted RBP17.05■□□□□ 0.32
COMMD4-224ENST00000568877 LRFN3Q9BTN0 628 aa17.05■□□□□ 0.32
COMMD4-224ENST00000568877 BRD8Q9H0E9 1235 aa17.05■□□□□ 0.32
COMMD4-224ENST00000568877 CD248Q9HCU0 757 aa17.05■□□□□ 0.32
COMMD4-224ENST00000568877 POLMQ9NP87 494 aaPredicted RBP17.05■□□□□ 0.32
COMMD4-224ENST00000568877 PRSS16Q9NQE7 514 aa17.05■□□□□ 0.32
COMMD4-224ENST00000568877 SNX12Q9UMY4 172 aa17.05■□□□□ 0.32
COMMD4-224ENST00000568877 TCRBV7S2A1N4TA0A589 114 aa17.04■□□□□ 0.32
COMMD4-224ENST00000568877 MATN3O15232 486 aa17.04■□□□□ 0.32
COMMD4-224ENST00000568877 LAMTOR5O43504 91 aa17.04■□□□□ 0.32
COMMD4-224ENST00000568877 SIN3BO75182 1162 aa17.04■□□□□ 0.32
COMMD4-224ENST00000568877 ZNF821O75541 412 aaPredicted RBP17.04■□□□□ 0.32
COMMD4-224ENST00000568877 PAPSS2O95340 614 aaPredicted RBP17.04■□□□□ 0.32
COMMD4-224ENST00000568877 ETF1P62495 437 aaKnown RBP17.04■□□□□ 0.32
COMMD4-224ENST00000568877 OTUD4Q01804 1114 aaKnown RBP17.04■□□□□ 0.32
COMMD4-224ENST00000568877 SLC10A7Q0GE19 358 aa17.04■□□□□ 0.32
COMMD4-224ENST00000568877 LBRQ14739 615 aaKnown RBP17.04■□□□□ 0.32
COMMD4-224ENST00000568877 NOMO1Q15155 1222 aa17.04■□□□□ 0.32
COMMD4-224ENST00000568877 TMCO4Q5TGY1 634 aa17.04■□□□□ 0.32
COMMD4-224ENST00000568877 Q6ZVU0 165 aa17.04■□□□□ 0.32
COMMD4-224ENST00000568877 C1orf210Q8IVY1 113 aa17.04■□□□□ 0.32
COMMD4-224ENST00000568877 CCDC13Q8IYE1 715 aa17.04■□□□□ 0.32
COMMD4-224ENST00000568877 TTC13Q8NBP0 860 aa17.04■□□□□ 0.32
COMMD4-224ENST00000568877 ACTL9Q8TC94 416 aa17.04■□□□□ 0.32
COMMD4-224ENST00000568877 ERLEC1Q96DZ1 483 aa17.04■□□□□ 0.32
COMMD4-224ENST00000568877 OSBPL9Q96SU4 736 aa17.04■□□□□ 0.32
COMMD4-224ENST00000568877 TNKS2Q9H2K2 1166 aa17.04■□□□□ 0.32
COMMD4-224ENST00000568877 NYNRINQ9P2P1 1898 aaKnown RBP17.03■□□□□ 0.32
COMMD4-224ENST00000568877 TCRBV21S2A2A0A5A6 115 aa17.03■□□□□ 0.32
COMMD4-224ENST00000568877 CTAGE9A4FU28 777 aa17.03■□□□□ 0.32
COMMD4-224ENST00000568877 AP1B1Q10567 949 aa17.03■□□□□ 0.32
COMMD4-224ENST00000568877 XRCC4Q13426 336 aa17.03■□□□□ 0.32
COMMD4-224ENST00000568877 HNRNPDQ14103 355 aaKnown RBP17.03■□□□□ 0.32
COMMD4-224ENST00000568877 CARD16Q5EG05 197 aa17.03■□□□□ 0.32
COMMD4-224ENST00000568877 MARC1Q5VT66 337 aa17.03■□□□□ 0.32
COMMD4-224ENST00000568877 PAPD7Q5XG87 772 aaKnown RBP17.03■□□□□ 0.32
COMMD4-224ENST00000568877 NYAP1Q6ZVC0 841 aa17.03■□□□□ 0.32
COMMD4-224ENST00000568877 ZC3H18Q86VM9 953 aaKnown RBP17.03■□□□□ 0.32
COMMD4-224ENST00000568877 PLPP6Q8IY26 295 aa17.03■□□□□ 0.32
COMMD4-224ENST00000568877 CAMKK1Q8N5S9 505 aa17.03■□□□□ 0.32
COMMD4-224ENST00000568877 TSTD1Q8NFU3 115 aa17.03■□□□□ 0.32
COMMD4-224ENST00000568877 OR2T3Q8NH03 318 aa17.03■□□□□ 0.32
COMMD4-224ENST00000568877 TFB1MQ8WVM0 346 aaKnown RBP17.03■□□□□ 0.32
COMMD4-224ENST00000568877 MAML1Q92585 1016 aa17.03■□□□□ 0.32
COMMD4-224ENST00000568877 CCDC114Q96M63 670 aa17.03■□□□□ 0.32
COMMD4-224ENST00000568877 HHIPQ96QV1 700 aa17.03■□□□□ 0.32
COMMD4-224ENST00000568877 FBRSQ9HAH7 460 aa17.03■□□□□ 0.32
COMMD4-224ENST00000568877 PRMT8Q9NR22 394 aaPredicted RBP17.03■□□□□ 0.32
COMMD4-224ENST00000568877 SEPT3Q9UH03 358 aa17.03■□□□□ 0.32
COMMD4-224ENST00000568877 HACD1B0YJ81 288 aa17.02■□□□□ 0.32
COMMD4-224ENST00000568877 K7ESF4 209 aa17.02■□□□□ 0.32
COMMD4-224ENST00000568877 CES2O00748 559 aa17.02■□□□□ 0.32
COMMD4-224ENST00000568877 FANCGO15287 622 aa17.02■□□□□ 0.32
COMMD4-224ENST00000568877 ZBTB24O43167 697 aaPredicted RBP17.02■□□□□ 0.32
COMMD4-224ENST00000568877 BNIP3LO60238 219 aa17.02■□□□□ 0.32
COMMD4-224ENST00000568877 APBB3O95704 486 aa17.02■□□□□ 0.32
COMMD4-224ENST00000568877 GSRP00390 522 aa17.02■□□□□ 0.32
COMMD4-224ENST00000568877 FGGP02679 453 aa17.02■□□□□ 0.32
COMMD4-224ENST00000568877 CCNB1P14635 433 aa17.02■□□□□ 0.32
COMMD4-224ENST00000568877 PRLRP16471 622 aa17.02■□□□□ 0.32
COMMD4-224ENST00000568877 TCP1P17987 556 aaKnown RBP17.02■□□□□ 0.32
COMMD4-224ENST00000568877 RECQLP46063 649 aaPredicted RBP17.02■□□□□ 0.32
COMMD4-224ENST00000568877 RENBPP51606 427 aa17.02■□□□□ 0.32
COMMD4-224ENST00000568877 NUBP1P53384 320 aa17.02■□□□□ 0.32
COMMD4-224ENST00000568877 EIF3EP60228 445 aaKnown RBP17.02■□□□□ 0.32
COMMD4-224ENST00000568877 RHOAP61586 193 aa17.02■□□□□ 0.32
COMMD4-224ENST00000568877 SNRPD1P62314 119 aaKnown RBP17.02■□□□□ 0.32
COMMD4-224ENST00000568877 ELAVL3Q14576 367 aaKnown RBP17.02■□□□□ 0.32
COMMD4-224ENST00000568877 PRKD1Q15139 912 aaPredicted RBP17.02■□□□□ 0.32
COMMD4-224ENST00000568877 LONRF2Q1L5Z9 754 aa17.02■□□□□ 0.32
COMMD4-224ENST00000568877 B4GALNT4Q76KP1 1039 aa17.02■□□□□ 0.32
COMMD4-224ENST00000568877 ADAT2Q7Z6V5 191 aaKnown RBP17.02■□□□□ 0.32
COMMD4-224ENST00000568877 STK40Q8N2I9 435 aa17.02■□□□□ 0.32
COMMD4-224ENST00000568877 BBS5Q8N3I7 341 aa17.02■□□□□ 0.32
COMMD4-224ENST00000568877 RASGEF1CQ8N431 466 aa17.02■□□□□ 0.32
COMMD4-224ENST00000568877 TEX26Q8N6G2 289 aa17.02■□□□□ 0.32
COMMD4-224ENST00000568877 TSEN2Q8NCE0 465 aaKnown RBP17.02■□□□□ 0.32
COMMD4-224ENST00000568877 OR2A12Q8NGT7 310 aa17.02■□□□□ 0.32
COMMD4-224ENST00000568877 COG1Q8WTW3 980 aa17.02■□□□□ 0.32
COMMD4-224ENST00000568877 OR8D1Q8WZ84 308 aa17.02■□□□□ 0.32
COMMD4-224ENST00000568877 PSKH2Q96QS6 385 aa17.02■□□□□ 0.32
COMMD4-224ENST00000568877 FAM118BQ9BPY3 351 aa17.02■□□□□ 0.32
COMMD4-224ENST00000568877 CINPQ9BW66 212 aaPredicted RBP17.02■□□□□ 0.32
COMMD4-224ENST00000568877 TM6SF2Q9BZW4 377 aa17.02■□□□□ 0.32
COMMD4-224ENST00000568877 LHX3Q9UBR4 397 aa17.02■□□□□ 0.32
COMMD4-224ENST00000568877 R3HDM2Q9Y2K5 976 aaKnown RBP17.02■□□□□ 0.32
COMMD4-224ENST00000568877 FARP1Q9Y4F1 1045 aaPredicted RBP17.02■□□□□ 0.32
COMMD4-224ENST00000568877 NUP205Q92621 2012 aa17.02■□□□□ 0.32
COMMD4-224ENST00000568877 H7C0C1 242 aa17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms