RNA–Protein interactions for RNA: ENST00000568129.1

HDGFL3-205, Transcript of HDGF like 3, humanhuman

TSL 2

Gene HDGFL3, Length 426 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-205ENST00000568129 A0A1W2PPC4 97 aa8.35□□□□□ -1.07
HDGFL3-205ENST00000568129 LRRC72A6NJI9 287 aa8.35□□□□□ -1.07
HDGFL3-205ENST00000568129 C4orf47A7E2U8 309 aa8.35□□□□□ -1.07
HDGFL3-205ENST00000568129 RNF103O00237 685 aa8.35□□□□□ -1.07
HDGFL3-205ENST00000568129 BCAT2O15382 392 aaPredicted RBP8.35□□□□□ -1.07
HDGFL3-205ENST00000568129 RAMP2O60895 175 aa8.35□□□□□ -1.07
HDGFL3-205ENST00000568129 RNF8O76064 485 aa8.35□□□□□ -1.07
HDGFL3-205ENST00000568129 PRNPP04156 253 aa8.35□□□□□ -1.07
HDGFL3-205ENST00000568129 SYPP08247 313 aa8.35□□□□□ -1.07
HDGFL3-205ENST00000568129 DESP17661 470 aa8.35□□□□□ -1.07
HDGFL3-205ENST00000568129 CSRP1P21291 193 aaKnown RBP8.35□□□□□ -1.07
HDGFL3-205ENST00000568129 MAOBP27338 520 aa8.35□□□□□ -1.07
HDGFL3-205ENST00000568129 IL1R2P27930 398 aa8.35□□□□□ -1.07
HDGFL3-205ENST00000568129 EPHB2P29323 1055 aa8.35□□□□□ -1.07
HDGFL3-205ENST00000568129 CHRNA3P32297 505 aa8.35□□□□□ -1.07
HDGFL3-205ENST00000568129 NUDT1P36639 197 aa8.35□□□□□ -1.07
HDGFL3-205ENST00000568129 ARSEP51690 589 aa8.35□□□□□ -1.07
HDGFL3-205ENST00000568129 METAP1P53582 386 aa8.35□□□□□ -1.07
HDGFL3-205ENST00000568129 ADPRHP54922 357 aa8.35□□□□□ -1.07
HDGFL3-205ENST00000568129 TAS2R38P59533 333 aa8.35□□□□□ -1.07
HDGFL3-205ENST00000568129 GFPT1Q06210 699 aaPredicted RBP8.35□□□□□ -1.07
HDGFL3-205ENST00000568129 SERINC3Q13530 473 aa8.35□□□□□ -1.07
HDGFL3-205ENST00000568129 DPYSQ14117 519 aa8.35□□□□□ -1.07
HDGFL3-205ENST00000568129 POLD3Q15054 466 aaPredicted RBP8.35□□□□□ -1.07
HDGFL3-205ENST00000568129 DPYSL2Q16555 572 aa8.35□□□□□ -1.07
HDGFL3-205ENST00000568129 CA9Q16790 459 aa8.35□□□□□ -1.07
HDGFL3-205ENST00000568129 PARP15Q460N3 678 aa8.35□□□□□ -1.07
HDGFL3-205ENST00000568129 CARD16Q5EG05 197 aa8.35□□□□□ -1.07
HDGFL3-205ENST00000568129 PIP5KL1Q5T9C9 394 aa8.35□□□□□ -1.07
HDGFL3-205ENST00000568129 AGBL4Q5VU57 503 aa8.35□□□□□ -1.07
HDGFL3-205ENST00000568129 NEK5Q6P3R8 708 aa8.35□□□□□ -1.07
HDGFL3-205ENST00000568129 SCYL2Q6P3W7 929 aa8.35□□□□□ -1.07
HDGFL3-205ENST00000568129 C22orf39Q6P5X5 142 aa8.35□□□□□ -1.07
HDGFL3-205ENST00000568129 DPY19L3Q6ZPD9 716 aa8.35□□□□□ -1.07
HDGFL3-205ENST00000568129 Q6ZVU0 165 aa8.35□□□□□ -1.07
HDGFL3-205ENST00000568129 DGLUCYQ7Z3D6 616 aa8.35□□□□□ -1.07
HDGFL3-205ENST00000568129 TRIM69Q86WT6 500 aa8.35□□□□□ -1.07
HDGFL3-205ENST00000568129 HDDC3Q8N4P3 179 aa8.35□□□□□ -1.07
HDGFL3-205ENST00000568129 ATP11CQ8NB49 1132 aa8.35□□□□□ -1.07
HDGFL3-205ENST00000568129 PIP4K2CQ8TBX8 421 aa8.35□□□□□ -1.07
HDGFL3-205ENST00000568129 TEKT4Q8WW24 435 aa8.35□□□□□ -1.07
HDGFL3-205ENST00000568129 TSC1Q92574 1164 aa8.35□□□□□ -1.07
HDGFL3-205ENST00000568129 ZNF653Q96CK0 615 aa8.35□□□□□ -1.07
HDGFL3-205ENST00000568129 EPAS1Q99814 870 aa8.35□□□□□ -1.07
HDGFL3-205ENST00000568129 OMDQ99983 421 aa8.35□□□□□ -1.07
HDGFL3-205ENST00000568129 SNRNP25Q9BV90 132 aaKnown RBP8.35□□□□□ -1.07
HDGFL3-205ENST00000568129 PDFQ9HBH1 243 aa8.35□□□□□ -1.07
HDGFL3-205ENST00000568129 ATP13A1Q9HD20 1204 aa8.35□□□□□ -1.07
HDGFL3-205ENST00000568129 ABHD10Q9NUJ1 306 aa8.35□□□□□ -1.07
HDGFL3-205ENST00000568129 EIF2B4Q9UI10 523 aaKnown RBP8.35□□□□□ -1.07
HDGFL3-205ENST00000568129 DNAI1Q9UI46 699 aa8.35□□□□□ -1.07
HDGFL3-205ENST00000568129 AP4E1Q9UPM8 1137 aa8.35□□□□□ -1.07
HDGFL3-205ENST00000568129 WASF2Q9Y6W5 498 aa8.35□□□□□ -1.07
HDGFL3-205ENST00000568129 COL5A1P20908 1838 aaPredicted RBP8.35□□□□□ -1.07
HDGFL3-205ENST00000568129 A0A1W2PR77 199 aa8.34□□□□□ -1.07
HDGFL3-205ENST00000568129 DCDC2BA2VCK2 349 aa8.34□□□□□ -1.07
HDGFL3-205ENST00000568129 RASA4BC9J798 803 aa8.34□□□□□ -1.07
HDGFL3-205ENST00000568129 C1QTNF3-AMACRE9PGA6 284 aa8.34□□□□□ -1.07
HDGFL3-205ENST00000568129 CBX4O00257 560 aa8.34□□□□□ -1.07
HDGFL3-205ENST00000568129 VILLO15195 856 aa8.34□□□□□ -1.07
HDGFL3-205ENST00000568129 RASA4O43374 803 aa8.34□□□□□ -1.07
HDGFL3-205ENST00000568129 PRPSAP2O60256 369 aa8.34□□□□□ -1.07
HDGFL3-205ENST00000568129 MFAP3LO75121 409 aa8.34□□□□□ -1.07
HDGFL3-205ENST00000568129 RNASEH2AO75792 299 aaKnown RBP8.34□□□□□ -1.07
HDGFL3-205ENST00000568129 MTA2O94776 668 aa8.34□□□□□ -1.07
HDGFL3-205ENST00000568129 GSRP00390 522 aa8.34□□□□□ -1.07
HDGFL3-205ENST00000568129 IL1BP01584 269 aa8.34□□□□□ -1.07
HDGFL3-205ENST00000568129 CEACAM1P13688 526 aa8.34□□□□□ -1.07
HDGFL3-205ENST00000568129 IL4RP24394 825 aa8.34□□□□□ -1.07
HDGFL3-205ENST00000568129 EIF4A3P38919 411 aaKnown RBP8.34□□□□□ -1.07
HDGFL3-205ENST00000568129 GRIA4P48058 902 aa8.34□□□□□ -1.07
HDGFL3-205ENST00000568129 PSMD8P48556 350 aa8.34□□□□□ -1.07
HDGFL3-205ENST00000568129 RACK1P63244 317 aaKnown RBP8.34□□□□□ -1.07
HDGFL3-205ENST00000568129 SLC25A11Q02978 314 aaKnown RBP8.34□□□□□ -1.07
HDGFL3-205ENST00000568129 CNTN1Q12860 1018 aa8.34□□□□□ -1.07
HDGFL3-205ENST00000568129 ACCSLQ4AC99 568 aa8.34□□□□□ -1.07
HDGFL3-205ENST00000568129 TDRD12Q587J7 1177 aaKnown RBP8.34□□□□□ -1.07
HDGFL3-205ENST00000568129 CCDC122Q5T0U0 273 aa8.34□□□□□ -1.07
HDGFL3-205ENST00000568129 DAB2IPQ5VWQ8 1189 aa8.34□□□□□ -1.07
HDGFL3-205ENST00000568129 IL31Q6EBC2 164 aa8.34□□□□□ -1.07
HDGFL3-205ENST00000568129 RWDD4Q6NW29 188 aaKnown RBP8.34□□□□□ -1.07
HDGFL3-205ENST00000568129 NCEH1Q6PIU2 408 aa8.34□□□□□ -1.07
HDGFL3-205ENST00000568129 LINGO4Q6UY18 593 aa8.34□□□□□ -1.07
HDGFL3-205ENST00000568129 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP8.34□□□□□ -1.07
HDGFL3-205ENST00000568129 RFX8Q6ZV50 586 aa8.34□□□□□ -1.07
HDGFL3-205ENST00000568129 POLNQ7Z5Q5 900 aa8.34□□□□□ -1.07
HDGFL3-205ENST00000568129 FAM124AQ86V42 546 aa8.34□□□□□ -1.07
HDGFL3-205ENST00000568129 ARHGAP12Q8IWW6 846 aa8.34□□□□□ -1.07
HDGFL3-205ENST00000568129 RGL4Q8IZJ4 473 aa8.34□□□□□ -1.07
HDGFL3-205ENST00000568129 LZTR1Q8N653 840 aa8.34□□□□□ -1.07
HDGFL3-205ENST00000568129 CHST14Q8NCH0 376 aa8.34□□□□□ -1.07
HDGFL3-205ENST00000568129 HCAR2Q8TDS4 363 aa8.34□□□□□ -1.07
HDGFL3-205ENST00000568129 ARRDC3Q96B67 414 aa8.34□□□□□ -1.07
HDGFL3-205ENST00000568129 ARHGEF26Q96DR7 871 aa8.34□□□□□ -1.07
HDGFL3-205ENST00000568129 CCDC114Q96M63 670 aa8.34□□□□□ -1.07
HDGFL3-205ENST00000568129 KCTD15Q96SI1 283 aaPredicted RBP8.34□□□□□ -1.07
HDGFL3-205ENST00000568129 CHP1Q99653 195 aa8.34□□□□□ -1.07
HDGFL3-205ENST00000568129 HEPHQ9BQS7 1158 aa8.34□□□□□ -1.07
HDGFL3-205ENST00000568129 SPON2Q9BUD6 331 aa8.34□□□□□ -1.07
HDGFL3-205ENST00000568129 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms