RNA–Protein interactions for RNA: ENST00000565922.1

CMTM3-211, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene CMTM3, Length 615 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-211ENST00000565922 SNRNP25Q9BV90 132 aaKnown RBP20.27■□□□□ 0.84
CMTM3-211ENST00000565922 GTPBP2Q9BX10 602 aaKnown RBP20.27■□□□□ 0.84
CMTM3-211ENST00000565922 MAGEB5Q9BZ81 275 aa20.27■□□□□ 0.84
CMTM3-211ENST00000565922 DEF6Q9H4E7 631 aa20.27■□□□□ 0.84
CMTM3-211ENST00000565922 DHX35Q9H5Z1 703 aaKnown RBP20.27■□□□□ 0.84
CMTM3-211ENST00000565922 DYRK4Q9NR20 520 aa20.27■□□□□ 0.84
CMTM3-211ENST00000565922 PCSK1NQ9UHG2 260 aa20.27■□□□□ 0.84
CMTM3-211ENST00000565922 LAMA1P25391 3075 aa20.27■□□□□ 0.84
CMTM3-211ENST00000565922 ASCC3Q8N3C0 2202 aaKnown RBP20.26■□□□□ 0.83
CMTM3-211ENST00000565922 K7ERQ8 282 aa20.26■□□□□ 0.83
CMTM3-211ENST00000565922 EEF2KO00418 725 aaKnown RBP20.26■□□□□ 0.83
CMTM3-211ENST00000565922 TM4SF5O14894 197 aa20.26■□□□□ 0.83
CMTM3-211ENST00000565922 SMAD6O43541 496 aaKnown RBP20.26■□□□□ 0.83
CMTM3-211ENST00000565922 LRCH4O75427 683 aa20.26■□□□□ 0.83
CMTM3-211ENST00000565922 DRD3P35462 400 aa20.26■□□□□ 0.83
CMTM3-211ENST00000565922 ACVRL1P37023 503 aa20.26■□□□□ 0.83
CMTM3-211ENST00000565922 AFF3P51826 1226 aaKnown RBP20.26■□□□□ 0.83
CMTM3-211ENST00000565922 NCEH1Q6PIU2 408 aa20.26■□□□□ 0.83
CMTM3-211ENST00000565922 IL27RAQ6UWB1 636 aa20.26■□□□□ 0.83
CMTM3-211ENST00000565922 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP20.26■□□□□ 0.83
CMTM3-211ENST00000565922 THAP2Q9H0W7 228 aa20.26■□□□□ 0.83
CMTM3-211ENST00000565922 IL36AQ9UHA7 158 aa20.26■□□□□ 0.83
CMTM3-211ENST00000565922 IP6K2Q9UHH9 426 aa20.26■□□□□ 0.83
CMTM3-211ENST00000565922 SARDHQ9UL12 918 aa20.26■□□□□ 0.83
CMTM3-211ENST00000565922 TMEM131Q92545 1883 aa20.25■□□□□ 0.83
CMTM3-211ENST00000565922 SSU72P8A0A1W2PR75 194 aa20.25■□□□□ 0.83
CMTM3-211ENST00000565922 KPNA3O00505 521 aaPredicted RBP20.25■□□□□ 0.83
CMTM3-211ENST00000565922 DAPK3O43293 454 aa20.25■□□□□ 0.83
CMTM3-211ENST00000565922 KDELR3O43731 214 aa20.25■□□□□ 0.83
CMTM3-211ENST00000565922 OPHN1O60890 802 aa20.25■□□□□ 0.83
CMTM3-211ENST00000565922 NUDT1P36639 197 aa20.25■□□□□ 0.83
CMTM3-211ENST00000565922 CCR5P51681 352 aa20.25■□□□□ 0.83
CMTM3-211ENST00000565922 SLC18A3Q16572 532 aa20.25■□□□□ 0.83
CMTM3-211ENST00000565922 UAP1L1Q3KQV9 507 aa20.25■□□□□ 0.83
CMTM3-211ENST00000565922 SARM1Q6SZW1 724 aa20.25■□□□□ 0.83
CMTM3-211ENST00000565922 CNGA4Q8IV77 575 aa20.25■□□□□ 0.83
CMTM3-211ENST00000565922 PLPP6Q8IY26 295 aa20.25■□□□□ 0.83
CMTM3-211ENST00000565922 UMODL1-AS1Q8N2C9 162 aa20.25■□□□□ 0.83
CMTM3-211ENST00000565922 MINDY1Q8N5J2 469 aa20.25■□□□□ 0.83
CMTM3-211ENST00000565922 NUP85Q9BW27 656 aa20.25■□□□□ 0.83
CMTM3-211ENST00000565922 TRIM7Q9C029 511 aa20.25■□□□□ 0.83
CMTM3-211ENST00000565922 TNKS2Q9H2K2 1166 aa20.25■□□□□ 0.83
CMTM3-211ENST00000565922 ABHD10Q9NUJ1 306 aa20.25■□□□□ 0.83
CMTM3-211ENST00000565922 LCMT1Q9UIC8 334 aa20.25■□□□□ 0.83
CMTM3-211ENST00000565922 ANAPC7Q9UJX3 599 aa20.25■□□□□ 0.83
CMTM3-211ENST00000565922 DNAH14Q0VDD8 3507 aa20.24■□□□□ 0.83
CMTM3-211ENST00000565922 TBC1D3DA0A087WVF3 549 aa20.24■□□□□ 0.83
CMTM3-211ENST00000565922 TBC1D3IA0A087WXS9 549 aa20.24■□□□□ 0.83
CMTM3-211ENST00000565922 TBC1D3EA0A087X179 549 aa20.24■□□□□ 0.83
CMTM3-211ENST00000565922 TBC1D3KA0A087X1G2 549 aa20.24■□□□□ 0.83
CMTM3-211ENST00000565922 A0A1W2PPC4 97 aa20.24■□□□□ 0.83
CMTM3-211ENST00000565922 TBC1D3FA6NER0 549 aaPredicted RBP20.24■□□□□ 0.83
CMTM3-211ENST00000565922 TBC1D3LB9A6J9 549 aa20.24■□□□□ 0.83
CMTM3-211ENST00000565922 PLRG1O43660 514 aaKnown RBP20.24■□□□□ 0.83
CMTM3-211ENST00000565922 MFAP3LO75121 409 aa20.24■□□□□ 0.83
CMTM3-211ENST00000565922 CER1O95813 267 aa20.24■□□□□ 0.83
CMTM3-211ENST00000565922 CYP1A2P05177 515 aa20.24■□□□□ 0.83
CMTM3-211ENST00000565922 IGHV4-34P06331 123 aa20.24■□□□□ 0.83
CMTM3-211ENST00000565922 TBC1D3HP0C7X1 549 aa20.24■□□□□ 0.83
CMTM3-211ENST00000565922 EIF4A3P38919 411 aaKnown RBP20.24■□□□□ 0.83
CMTM3-211ENST00000565922 GRIA4P48058 902 aa20.24■□□□□ 0.83
CMTM3-211ENST00000565922 NDST2P52849 883 aa20.24■□□□□ 0.83
CMTM3-211ENST00000565922 SNRPD1P62314 119 aaKnown RBP20.24■□□□□ 0.83
CMTM3-211ENST00000565922 GRIK2Q13002 908 aa20.24■□□□□ 0.83
CMTM3-211ENST00000565922 MAPK8IP2Q13387 824 aaPredicted RBP20.24■□□□□ 0.83
CMTM3-211ENST00000565922 BOLA3Q53S33 107 aa20.24■□□□□ 0.83
CMTM3-211ENST00000565922 CARD16Q5EG05 197 aa20.24■□□□□ 0.83
CMTM3-211ENST00000565922 PPM1JQ5JR12 505 aa20.24■□□□□ 0.83
CMTM3-211ENST00000565922 TBC1D3GQ6DHY5 549 aa20.24■□□□□ 0.83
CMTM3-211ENST00000565922 TBC1D3CQ6IPX1 549 aa20.24■□□□□ 0.83
CMTM3-211ENST00000565922 DPY19L3Q6ZPD9 716 aa20.24■□□□□ 0.83
CMTM3-211ENST00000565922 TBC1D3Q8IZP1 549 aaPredicted RBP20.24■□□□□ 0.83
CMTM3-211ENST00000565922 ARFGAP1Q8N6T3 406 aa20.24■□□□□ 0.83
CMTM3-211ENST00000565922 NIPA2Q8N8Q9 360 aa20.24■□□□□ 0.83
CMTM3-211ENST00000565922 C1orf216Q8TAB5 229 aa20.24■□□□□ 0.83
CMTM3-211ENST00000565922 CTNNBL1Q8WYA6 563 aaPredicted RBP20.24■□□□□ 0.83
CMTM3-211ENST00000565922 SKA1Q96BD8 255 aa20.24■□□□□ 0.83
CMTM3-211ENST00000565922 LRIG1Q96JA1 1093 aa20.24■□□□□ 0.83
CMTM3-211ENST00000565922 PEBP4Q96S96 227 aa20.24■□□□□ 0.83
CMTM3-211ENST00000565922 HEPHQ9BQS7 1158 aa20.24■□□□□ 0.83
CMTM3-211ENST00000565922 ZWILCHQ9H900 591 aa20.24■□□□□ 0.83
CMTM3-211ENST00000565922 GPATCH2LQ9NWQ4 482 aa20.24■□□□□ 0.83
CMTM3-211ENST00000565922 CACNA1AO00555 2505 aa20.24■□□□□ 0.83
CMTM3-211ENST00000565922 RASA4BC9J798 803 aa20.23■□□□□ 0.83
CMTM3-211ENST00000565922 MYO1FO00160 1098 aa20.23■□□□□ 0.83
CMTM3-211ENST00000565922 RASA4O43374 803 aa20.23■□□□□ 0.83
CMTM3-211ENST00000565922 BUB1O43683 1085 aa20.23■□□□□ 0.83
CMTM3-211ENST00000565922 AKR1B10O60218 316 aa20.23■□□□□ 0.83
CMTM3-211ENST00000565922 GSRP00390 522 aa20.23■□□□□ 0.83
CMTM3-211ENST00000565922 DNA2P51530 1060 aa20.23■□□□□ 0.83
CMTM3-211ENST00000565922 CCNHP51946 323 aaPredicted RBP20.23■□□□□ 0.83
CMTM3-211ENST00000565922 RACK1P63244 317 aaKnown RBP20.23■□□□□ 0.83
CMTM3-211ENST00000565922 CNTN1Q12860 1018 aa20.23■□□□□ 0.83
CMTM3-211ENST00000565922 INO80DQ53TQ3 878 aaPredicted RBP20.23■□□□□ 0.83
CMTM3-211ENST00000565922 PPP6R3Q5H9R7 873 aaPredicted RBP20.23■□□□□ 0.83
CMTM3-211ENST00000565922 AGBL4Q5VU57 503 aa20.23■□□□□ 0.83
CMTM3-211ENST00000565922 ADAT2Q7Z6V5 191 aaKnown RBP20.23■□□□□ 0.83
CMTM3-211ENST00000565922 GRIN3AQ8TCU5 1115 aa20.23■□□□□ 0.83
CMTM3-211ENST00000565922 TRIM5Q9C035 493 aa20.23■□□□□ 0.83
CMTM3-211ENST00000565922 PREBQ9HCU5 417 aa20.23■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms