RNA–Protein interactions for RNA: ENST00000564846.1

CLN6-205, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 1,762 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-205ENST00000564846 DPP7Q9UHL4 492 aa19.9■□□□□ 0.78
CLN6-205ENST00000564846 SH3BP1Q9Y3L3 701 aa19.9■□□□□ 0.78
CLN6-205ENST00000564846 FAM159BA6NKW6 160 aa19.89■□□□□ 0.77
CLN6-205ENST00000564846 GFRA2O00451 464 aa19.89■□□□□ 0.77
CLN6-205ENST00000564846 BRAFP15056 766 aa19.89■□□□□ 0.77
CLN6-205ENST00000564846 ERVK-21P61565 698 aa19.89■□□□□ 0.77
CLN6-205ENST00000564846 SPANXN3Q5MJ09 141 aa19.89■□□□□ 0.77
CLN6-205ENST00000564846 IL31Q6EBC2 164 aa19.89■□□□□ 0.77
CLN6-205ENST00000564846 FAM109BQ6ICB4 259 aaPredicted RBP19.89■□□□□ 0.77
CLN6-205ENST00000564846 CTAGE3PQ8IX95 158 aa19.89■□□□□ 0.77
CLN6-205ENST00000564846 LEMD2Q8NC56 503 aa19.89■□□□□ 0.77
CLN6-205ENST00000564846 IPMKQ8NFU5 416 aa19.89■□□□□ 0.77
CLN6-205ENST00000564846 CENPTQ96BT3 561 aa19.89■□□□□ 0.77
CLN6-205ENST00000564846 TRIM56Q9BRZ2 755 aaKnown RBP19.89■□□□□ 0.77
CLN6-205ENST00000564846 ZNF180Q9UJW8 692 aa19.89■□□□□ 0.77
CLN6-205ENST00000564846 IQANK1A0A1B0GTG1 560 aa19.88■□□□□ 0.77
CLN6-205ENST00000564846 SOBPA7XYQ1 873 aa19.88■□□□□ 0.77
CLN6-205ENST00000564846 KDELR3O43731 214 aa19.88■□□□□ 0.77
CLN6-205ENST00000564846 XYLBO75191 536 aa19.88■□□□□ 0.77
CLN6-205ENST00000564846 RFPL2O75678 378 aa19.88■□□□□ 0.77
CLN6-205ENST00000564846 PIAS1O75925 651 aa19.88■□□□□ 0.77
CLN6-205ENST00000564846 HOXD9P28356 352 aaPredicted RBP19.88■□□□□ 0.77
CLN6-205ENST00000564846 ADRA1AP35348 466 aa19.88■□□□□ 0.77
CLN6-205ENST00000564846 OXCT1P55809 520 aa19.88■□□□□ 0.77
CLN6-205ENST00000564846 GPM6BQ13491 265 aa19.88■□□□□ 0.77
CLN6-205ENST00000564846 CRYMQ14894 314 aa19.88■□□□□ 0.77
CLN6-205ENST00000564846 SHHQ15465 462 aa19.88■□□□□ 0.77
CLN6-205ENST00000564846 TTC19Q6DKK2 380 aaPredicted RBP19.88■□□□□ 0.77
CLN6-205ENST00000564846 ZNF449Q6P9G9 518 aa19.88■□□□□ 0.77
CLN6-205ENST00000564846 TMEM135Q86UB9 458 aa19.88■□□□□ 0.77
CLN6-205ENST00000564846 CCDC117Q8IWD4 279 aaPredicted RBP19.88■□□□□ 0.77
CLN6-205ENST00000564846 BBS5Q8N3I7 341 aa19.88■□□□□ 0.77
CLN6-205ENST00000564846 PPM1NQ8N819 430 aa19.88■□□□□ 0.77
CLN6-205ENST00000564846 OR7D4Q8NG98 312 aa19.88■□□□□ 0.77
CLN6-205ENST00000564846 OR52K2Q8NGK3 314 aa19.88■□□□□ 0.77
CLN6-205ENST00000564846 TMA16Q96EY4 203 aaKnown RBP19.88■□□□□ 0.77
CLN6-205ENST00000564846 APOL2Q9BQE5 337 aa19.88■□□□□ 0.77
CLN6-205ENST00000564846 FSD1LQ9BXM9 530 aa19.88■□□□□ 0.77
CLN6-205ENST00000564846 SLC46A2Q9BY10 475 aa19.88■□□□□ 0.77
CLN6-205ENST00000564846 CFAP97Q9P2B7 532 aa19.88■□□□□ 0.77
CLN6-205ENST00000564846 ARHGAP26Q9UNA1 814 aa19.88■□□□□ 0.77
CLN6-205ENST00000564846 PMPCBO75439 489 aa19.88■□□□□ 0.77
CLN6-205ENST00000564846 CHN1P15882 459 aa19.88■□□□□ 0.77
CLN6-205ENST00000564846 GJA1P17302 382 aa19.88■□□□□ 0.77
CLN6-205ENST00000564846 CCR2P41597 374 aa19.88■□□□□ 0.77
CLN6-205ENST00000564846 ITKQ08881 620 aa19.88■□□□□ 0.77
CLN6-205ENST00000564846 FRG1Q14331 258 aaKnown RBP19.88■□□□□ 0.77
CLN6-205ENST00000564846 CERCAMQ5T4B2 595 aa19.88■□□□□ 0.77
CLN6-205ENST00000564846 LGSNQ5TDP6 509 aa19.88■□□□□ 0.77
CLN6-205ENST00000564846 TRMT10BQ6PF06 316 aaKnown RBP19.88■□□□□ 0.77
CLN6-205ENST00000564846 SHKBP1Q8TBC3 707 aa19.88■□□□□ 0.77
CLN6-205ENST00000564846 MDM1Q8TC05 714 aa19.88■□□□□ 0.77
CLN6-205ENST00000564846 CDKL2Q92772 493 aa19.88■□□□□ 0.77
CLN6-205ENST00000564846 SPON2Q9BUD6 331 aa19.88■□□□□ 0.77
CLN6-205ENST00000564846 FICDQ9BVA6 458 aa19.88■□□□□ 0.77
CLN6-205ENST00000564846 ACE2Q9BYF1 805 aaPredicted RBP19.88■□□□□ 0.77
CLN6-205ENST00000564846 POLR1EQ9GZS1 481 aaKnown RBP19.88■□□□□ 0.77
CLN6-205ENST00000564846 HCFC1R1Q9NWW0 138 aa19.88■□□□□ 0.77
CLN6-205ENST00000564846 RPS6KL1Q9Y6S9 549 aa19.88■□□□□ 0.77
CLN6-205ENST00000564846 FAM237BA0A1B0GVD1 139 aa19.87■□□□□ 0.77
CLN6-205ENST00000564846 TMEM120BA0PK00 339 aa19.87■□□□□ 0.77
CLN6-205ENST00000564846 FOXO6A8MYZ6 492 aa19.87■□□□□ 0.77
CLN6-205ENST00000564846 TBL1XO60907 577 aa19.87■□□□□ 0.77
CLN6-205ENST00000564846 USP1O94782 785 aa19.87■□□□□ 0.77
CLN6-205ENST00000564846 CREB1P16220 341 aa19.87■□□□□ 0.77
CLN6-205ENST00000564846 EPCAMP16422 314 aa19.87■□□□□ 0.77
CLN6-205ENST00000564846 LSP1P33241 339 aa19.87■□□□□ 0.77
CLN6-205ENST00000564846 MAGEA10P43363 369 aaPredicted RBP19.87■□□□□ 0.77
CLN6-205ENST00000564846 NAB1Q13506 487 aa19.87■□□□□ 0.77
CLN6-205ENST00000564846 ZNF235Q14590 738 aa19.87■□□□□ 0.77
CLN6-205ENST00000564846 RFTN1Q14699 578 aaPredicted RBP19.87■□□□□ 0.77
CLN6-205ENST00000564846 ARHGAP15Q53QZ3 475 aa19.87■□□□□ 0.77
CLN6-205ENST00000564846 STXBP5Q5T5C0 1151 aa19.87■□□□□ 0.77
CLN6-205ENST00000564846 CXorf57Q6NSI4 855 aaKnown RBP19.87■□□□□ 0.77
CLN6-205ENST00000564846 ELMSAN1Q6PJG2 1045 aa19.87■□□□□ 0.77
CLN6-205ENST00000564846 CNPY4Q8N129 248 aa19.87■□□□□ 0.77
CLN6-205ENST00000564846 CPXM2Q8N436 756 aa19.87■□□□□ 0.77
CLN6-205ENST00000564846 MRGPRX2Q96LB1 330 aa19.87■□□□□ 0.77
CLN6-205ENST00000564846 SMC6Q96SB8 1091 aa19.87■□□□□ 0.77
CLN6-205ENST00000564846 TRABDQ9H4I3 376 aa19.87■□□□□ 0.77
CLN6-205ENST00000564846 ATP13A1Q9HD20 1204 aa19.87■□□□□ 0.77
CLN6-205ENST00000564846 DNMT3BQ9UBC3 853 aaKnown RBP19.87■□□□□ 0.77
CLN6-205ENST00000564846 MTCL1Q9Y4B5 1905 aaKnown RBP19.86■□□□□ 0.77
CLN6-205ENST00000564846 SRRM3A6NNA2 597 aaPredicted RBP19.86■□□□□ 0.77
CLN6-205ENST00000564846 CXorf49A8MYA2 514 aaPredicted RBP19.86■□□□□ 0.77
CLN6-205ENST00000564846 H0Y626 953 aa19.86■□□□□ 0.77
CLN6-205ENST00000564846 NRG2O14511 850 aaPredicted RBP19.86■□□□□ 0.77
CLN6-205ENST00000564846 ATP9BO43861 1147 aa19.86■□□□□ 0.77
CLN6-205ENST00000564846 POU2F2P09086 479 aa19.86■□□□□ 0.77
CLN6-205ENST00000564846 WNT3AP56704 352 aa19.86■□□□□ 0.77
CLN6-205ENST00000564846 MAXP61244 160 aa19.86■□□□□ 0.77
CLN6-205ENST00000564846 NIPAL4Q0D2K0 466 aa19.86■□□□□ 0.77
CLN6-205ENST00000564846 ARMC3Q5W041 872 aa19.86■□□□□ 0.77
CLN6-205ENST00000564846 RNF219Q5W0B1 726 aaPredicted RBP19.86■□□□□ 0.77
CLN6-205ENST00000564846 KDELC1Q6UW63 502 aa19.86■□□□□ 0.77
CLN6-205ENST00000564846 RANBP10Q6VN20 620 aa19.86■□□□□ 0.77
CLN6-205ENST00000564846 MZB1Q8WU39 189 aa19.86■□□□□ 0.77
CLN6-205ENST00000564846 KCNK9Q9NPC2 374 aa19.86■□□□□ 0.77
CLN6-205ENST00000564846 SMYD2Q9NRG4 433 aa19.86■□□□□ 0.77
CLN6-205ENST00000564846 INTS9Q9NV88 658 aaKnown RBP19.86■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms