RNA–Protein interactions for RNA: ENST00000564606.5

ATXN3-249, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 645 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-249ENST00000564606 IQCF3P0C7M6 154 aa7.75□□□□□ -1.17
ATXN3-249ENST00000564606 PABPC4LP0CB38 370 aaKnown RBP7.75□□□□□ -1.17
ATXN3-249ENST00000564606 NCAM1P13591 858 aa7.75□□□□□ -1.17
ATXN3-249ENST00000564606 TTKP33981 857 aa7.75□□□□□ -1.17
ATXN3-249ENST00000564606 CPOXP36551 454 aa7.75□□□□□ -1.17
ATXN3-249ENST00000564606 ABL2P42684 1182 aa7.75□□□□□ -1.17
ATXN3-249ENST00000564606 RPL5P46777 297 aaKnown RBP7.75□□□□□ -1.17
ATXN3-249ENST00000564606 CPA2P48052 419 aa7.75□□□□□ -1.17
ATXN3-249ENST00000564606 CD151P48509 253 aa7.75□□□□□ -1.17
ATXN3-249ENST00000564606 NUMBP49757 651 aa7.75□□□□□ -1.17
ATXN3-249ENST00000564606 ATP4BP51164 291 aa7.75□□□□□ -1.17
ATXN3-249ENST00000564606 EPHB1P54762 984 aa7.75□□□□□ -1.17
ATXN3-249ENST00000564606 DAOAP59103 153 aa7.75□□□□□ -1.17
ATXN3-249ENST00000564606 LILRA4P59901 499 aa7.75□□□□□ -1.17
ATXN3-249ENST00000564606 RAB10P61026 200 aa7.75□□□□□ -1.17
ATXN3-249ENST00000564606 SLC10A2Q12908 348 aaPredicted RBP7.75□□□□□ -1.17
ATXN3-249ENST00000564606 CDC16Q13042 620 aa7.75□□□□□ -1.17
ATXN3-249ENST00000564606 NME3Q13232 169 aa7.75□□□□□ -1.17
ATXN3-249ENST00000564606 SQLEQ14534 574 aa7.75□□□□□ -1.17
ATXN3-249ENST00000564606 KIZQ2M2Z5 673 aa7.75□□□□□ -1.17
ATXN3-249ENST00000564606 GRAMD1BQ3KR37 738 aa7.75□□□□□ -1.17
ATXN3-249ENST00000564606 LIN52Q52LA3 116 aa7.75□□□□□ -1.17
ATXN3-249ENST00000564606 PRAMEF18Q5VWM3 479 aa7.75□□□□□ -1.17
ATXN3-249ENST00000564606 KIAA0930Q6ICG6 404 aaPredicted RBP7.75□□□□□ -1.17
ATXN3-249ENST00000564606 TRNP1Q6NT89 227 aa7.75□□□□□ -1.17
ATXN3-249ENST00000564606 PKN3Q6P5Z2 889 aa7.75□□□□□ -1.17
ATXN3-249ENST00000564606 PLEKHH3Q7Z736 793 aa7.75□□□□□ -1.17
ATXN3-249ENST00000564606 CLEC14AQ86T13 490 aa7.75□□□□□ -1.17
ATXN3-249ENST00000564606 TTC7BQ86TV6 843 aa7.75□□□□□ -1.17
ATXN3-249ENST00000564606 KBTBD6Q86V97 674 aa7.75□□□□□ -1.17
ATXN3-249ENST00000564606 CNTN4Q8IWV2 1026 aa7.75□□□□□ -1.17
ATXN3-249ENST00000564606 KLHDC8BQ8IXV7 354 aa7.75□□□□□ -1.17
ATXN3-249ENST00000564606 PQLC1Q8N2U9 271 aa7.75□□□□□ -1.17
ATXN3-249ENST00000564606 CHCHD4Q8N4Q1 142 aa7.75□□□□□ -1.17
ATXN3-249ENST00000564606 CCDC185Q8N715 623 aa7.75□□□□□ -1.17
ATXN3-249ENST00000564606 TERB1Q8NA31 727 aa7.75□□□□□ -1.17
ATXN3-249ENST00000564606 ZNF483Q8TF39 744 aaPredicted RBP7.75□□□□□ -1.17
ATXN3-249ENST00000564606 ARNTL2Q8WYA1 636 aa7.75□□□□□ -1.17
ATXN3-249ENST00000564606 COPS5Q92905 334 aa7.75□□□□□ -1.17
ATXN3-249ENST00000564606 OPTNQ96CV9 577 aa7.75□□□□□ -1.17
ATXN3-249ENST00000564606 DGCR14Q96DF8 476 aaKnown RBP7.75□□□□□ -1.17
ATXN3-249ENST00000564606 AGAP3Q96P47 875 aa7.75□□□□□ -1.17
ATXN3-249ENST00000564606 LGMNQ99538 433 aa7.75□□□□□ -1.17
ATXN3-249ENST00000564606 CCT7Q99832 543 aa7.75□□□□□ -1.17
ATXN3-249ENST00000564606 TBL1YQ9BQ87 522 aa7.75□□□□□ -1.17
ATXN3-249ENST00000564606 SYT15Q9BQS2 421 aa7.75□□□□□ -1.17
ATXN3-249ENST00000564606 TRIM56Q9BRZ2 755 aaKnown RBP7.75□□□□□ -1.17
ATXN3-249ENST00000564606 TINF2Q9BSI4 451 aa7.75□□□□□ -1.17
ATXN3-249ENST00000564606 SLC25A23Q9BV35 468 aa7.75□□□□□ -1.17
ATXN3-249ENST00000564606 COLEC11Q9BWP8 271 aa7.75□□□□□ -1.17
ATXN3-249ENST00000564606 ABCC13Q9NSE7 274 aa7.75□□□□□ -1.17
ATXN3-249ENST00000564606 TMEM45AQ9NWC5 275 aa7.75□□□□□ -1.17
ATXN3-249ENST00000564606 DDIT4Q9NX09 232 aa7.75□□□□□ -1.17
ATXN3-249ENST00000564606 WBP1LQ9NX94 342 aa7.75□□□□□ -1.17
ATXN3-249ENST00000564606 TMEM216Q9P0N5 145 aa7.75□□□□□ -1.17
ATXN3-249ENST00000564606 MAGED2Q9UNF1 606 aaPredicted RBP7.75□□□□□ -1.17
ATXN3-249ENST00000564606 POMPQ9Y244 141 aa7.75□□□□□ -1.17
ATXN3-249ENST00000564606 GIT1Q9Y2X7 761 aa7.75□□□□□ -1.17
ATXN3-249ENST00000564606 SQORQ9Y6N5 450 aa7.75□□□□□ -1.17
ATXN3-249ENST00000564606 BTBD19C9JJ37 291 aa7.74□□□□□ -1.17
ATXN3-249ENST00000564606 PDLIM1O00151 329 aa7.74□□□□□ -1.17
ATXN3-249ENST00000564606 GABRDO14764 452 aa7.74□□□□□ -1.17
ATXN3-249ENST00000564606 GPR182O15218 404 aa7.74□□□□□ -1.17
ATXN3-249ENST00000564606 MATN3O15232 486 aa7.74□□□□□ -1.17
ATXN3-249ENST00000564606 GPR32O75388 356 aa7.74□□□□□ -1.17
ATXN3-249ENST00000564606 PAPSS2O95340 614 aaPredicted RBP7.74□□□□□ -1.17
ATXN3-249ENST00000564606 F2P00734 622 aa7.74□□□□□ -1.17
ATXN3-249ENST00000564606 THP07101 528 aa7.74□□□□□ -1.17
ATXN3-249ENST00000564606 GJB1P08034 283 aa7.74□□□□□ -1.17
ATXN3-249ENST00000564606 HSPA1AP0DMV8 641 aaKnown RBP7.74□□□□□ -1.17
ATXN3-249ENST00000564606 HSPA1BP0DMV9 641 aaKnown RBP7.74□□□□□ -1.17
ATXN3-249ENST00000564606 ERVK-10P10266 1014 aa7.74□□□□□ -1.17
ATXN3-249ENST00000564606 FCGR1AP12314 374 aa7.74□□□□□ -1.17
ATXN3-249ENST00000564606 VAV1P15498 845 aa7.74□□□□□ -1.17
ATXN3-249ENST00000564606 RAG1P15918 1043 aa7.74□□□□□ -1.17
ATXN3-249ENST00000564606 VCLP18206 1134 aa7.74□□□□□ -1.17
ATXN3-249ENST00000564606 TFEBP19484 476 aa7.74□□□□□ -1.17
ATXN3-249ENST00000564606 GLDCP23378 1020 aa7.74□□□□□ -1.17
ATXN3-249ENST00000564606 PIK3R1P27986 724 aa7.74□□□□□ -1.17
ATXN3-249ENST00000564606 HOXA11P31270 313 aaPredicted RBP7.74□□□□□ -1.17
ATXN3-249ENST00000564606 CCR1P32246 355 aa7.74□□□□□ -1.17
ATXN3-249ENST00000564606 MLH1P40692 756 aa7.74□□□□□ -1.17
ATXN3-249ENST00000564606 PSMC4P43686 418 aa7.74□□□□□ -1.17
ATXN3-249ENST00000564606 ALDH1A3P47895 512 aa7.74□□□□□ -1.17
ATXN3-249ENST00000564606 CXCR3P49682 368 aa7.74□□□□□ -1.17
ATXN3-249ENST00000564606 NUDT2P50583 147 aa7.74□□□□□ -1.17
ATXN3-249ENST00000564606 RENBPP51606 427 aa7.74□□□□□ -1.17
ATXN3-249ENST00000564606 POLE2P56282 527 aa7.74□□□□□ -1.17
ATXN3-249ENST00000564606 ESRRGP62508 458 aa7.74□□□□□ -1.17
ATXN3-249ENST00000564606 SLC25A3Q00325 362 aa7.74□□□□□ -1.17
ATXN3-249ENST00000564606 TSPY1Q01534 308 aa7.74□□□□□ -1.17
ATXN3-249ENST00000564606 NRG1Q02297 640 aaPredicted RBP7.74□□□□□ -1.17
ATXN3-249ENST00000564606 ZBTB17Q13105 803 aa7.74□□□□□ -1.17
ATXN3-249ENST00000564606 UBAP2LQ14157 1087 aaKnown RBP7.74□□□□□ -1.17
ATXN3-249ENST00000564606 GRM2Q14416 872 aa7.74□□□□□ -1.17
ATXN3-249ENST00000564606 R3HDM1Q15032 1099 aaKnown RBP7.74□□□□□ -1.17
ATXN3-249ENST00000564606 FAM110CQ1W6H9 321 aa7.74□□□□□ -1.17
ATXN3-249ENST00000564606 SAMD4BQ5PRF9 694 aaKnown RBP7.74□□□□□ -1.17
ATXN3-249ENST00000564606 OGFRL1Q5TC84 451 aaPredicted RBP7.74□□□□□ -1.17
ATXN3-249ENST00000564606 KCTD11Q693B1 232 aa7.74□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms