RNA–Protein interactions for RNA: ENST00000564519.1

HERC2-206, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 2, humanhuman

TSL 3

Gene HERC2, Length 323 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC2-206ENST00000564519 EDEM3Q9BZQ6 932 aa12.96□□□□□ -0.33
HERC2-206ENST00000564519 TRIM7Q9C029 511 aa12.96□□□□□ -0.33
HERC2-206ENST00000564519 GAREM1Q9H706 876 aa12.96□□□□□ -0.33
HERC2-206ENST00000564519 OSGEPQ9NPF4 335 aa12.96□□□□□ -0.33
HERC2-206ENST00000564519 TMEM248Q9NWD8 314 aa12.96□□□□□ -0.33
HERC2-206ENST00000564519 GPATCH2LQ9NWQ4 482 aa12.96□□□□□ -0.33
HERC2-206ENST00000564519 FZD10Q9ULW2 581 aa12.96□□□□□ -0.33
HERC2-206ENST00000564519 ANKRD6Q9Y2G4 727 aa12.96□□□□□ -0.33
HERC2-206ENST00000564519 FCF1Q9Y324 198 aaKnown RBP12.96□□□□□ -0.33
HERC2-206ENST00000564519 NUMA1Q14980 2115 aa12.95□□□□□ -0.34
HERC2-206ENST00000564519 C1QTNF3-AMACRE9PGA6 284 aa12.95□□□□□ -0.34
HERC2-206ENST00000564519 ALOX15BO15296 676 aa12.95□□□□□ -0.34
HERC2-206ENST00000564519 PLRG1O43660 514 aaKnown RBP12.95□□□□□ -0.34
HERC2-206ENST00000564519 FTLP02792 175 aaPredicted RBP12.95□□□□□ -0.34
HERC2-206ENST00000564519 WNT1P04628 370 aa12.95□□□□□ -0.34
HERC2-206ENST00000564519 L1CAMP32004 1257 aa12.95□□□□□ -0.34
HERC2-206ENST00000564519 CHRNA3P32297 505 aa12.95□□□□□ -0.34
HERC2-206ENST00000564519 GRIA4P48058 902 aa12.95□□□□□ -0.34
HERC2-206ENST00000564519 MAPKAPK2P49137 400 aa12.95□□□□□ -0.34
HERC2-206ENST00000564519 CCR5P51681 352 aa12.95□□□□□ -0.34
HERC2-206ENST00000564519 UBASH3AP57075 661 aa12.95□□□□□ -0.34
HERC2-206ENST00000564519 TAS2R38P59533 333 aa12.95□□□□□ -0.34
HERC2-206ENST00000564519 ARSIQ5FYB1 569 aa12.95□□□□□ -0.34
HERC2-206ENST00000564519 FIGNQ5HY92 759 aa12.95□□□□□ -0.34
HERC2-206ENST00000564519 EFHC2Q5JST6 749 aa12.95□□□□□ -0.34
HERC2-206ENST00000564519 PIP5KL1Q5T9C9 394 aa12.95□□□□□ -0.34
HERC2-206ENST00000564519 FAM46CQ5VWP2 391 aa12.95□□□□□ -0.34
HERC2-206ENST00000564519 RETSATQ6NUM9 610 aa12.95□□□□□ -0.34
HERC2-206ENST00000564519 LEKR1Q6ZMV7 388 aa12.95□□□□□ -0.34
HERC2-206ENST00000564519 DPY19L3Q6ZPD9 716 aa12.95□□□□□ -0.34
HERC2-206ENST00000564519 TMC6Q7Z403 805 aa12.95□□□□□ -0.34
HERC2-206ENST00000564519 NAXDQ8IW45 347 aa12.95□□□□□ -0.34
HERC2-206ENST00000564519 GRIN3AQ8TCU5 1115 aa12.95□□□□□ -0.34
HERC2-206ENST00000564519 SETD7Q8WTS6 366 aaKnown RBP12.95□□□□□ -0.34
HERC2-206ENST00000564519 VCPIP1Q96JH7 1222 aa12.95□□□□□ -0.34
HERC2-206ENST00000564519 NOL6Q9H6R4 1146 aaKnown RBP12.95□□□□□ -0.34
HERC2-206ENST00000564519 APOBEC2Q9Y235 224 aaKnown RBP12.95□□□□□ -0.34
HERC2-206ENST00000564519 WASF2Q9Y6W5 498 aa12.95□□□□□ -0.34
HERC2-206ENST00000564519 CEP295Q9C0D2 2601 aa12.94□□□□□ -0.34
HERC2-206ENST00000564519 ADAMTS9Q9P2N4 1935 aa12.94□□□□□ -0.34
HERC2-206ENST00000564519 TBC1D3DA0A087WVF3 549 aa12.94□□□□□ -0.34
HERC2-206ENST00000564519 TBC1D3IA0A087WXS9 549 aa12.94□□□□□ -0.34
HERC2-206ENST00000564519 TBC1D3EA0A087X179 549 aa12.94□□□□□ -0.34
HERC2-206ENST00000564519 TBC1D3KA0A087X1G2 549 aa12.94□□□□□ -0.34
HERC2-206ENST00000564519 ANKRD62A6NC57 917 aa12.94□□□□□ -0.34
HERC2-206ENST00000564519 TBC1D3FA6NER0 549 aaPredicted RBP12.94□□□□□ -0.34
HERC2-206ENST00000564519 TBC1D3LB9A6J9 549 aa12.94□□□□□ -0.34
HERC2-206ENST00000564519 KPNA3O00505 521 aaPredicted RBP12.94□□□□□ -0.34
HERC2-206ENST00000564519 CREB3O43889 395 aa12.94□□□□□ -0.34
HERC2-206ENST00000564519 RAMP2O60895 175 aa12.94□□□□□ -0.34
HERC2-206ENST00000564519 TBC1D3HP0C7X1 549 aa12.94□□□□□ -0.34
HERC2-206ENST00000564519 GZMAP12544 262 aa12.94□□□□□ -0.34
HERC2-206ENST00000564519 PSMA2P25787 234 aa12.94□□□□□ -0.34
HERC2-206ENST00000564519 MAT2AP31153 395 aaKnown RBP12.94□□□□□ -0.34
HERC2-206ENST00000564519 DNA2P51530 1060 aa12.94□□□□□ -0.34
HERC2-206ENST00000564519 RACK1P63244 317 aaKnown RBP12.94□□□□□ -0.34
HERC2-206ENST00000564519 TPM4P67936 248 aa12.94□□□□□ -0.34
HERC2-206ENST00000564519 TEAD4Q15561 434 aa12.94□□□□□ -0.34
HERC2-206ENST00000564519 CA9Q16790 459 aa12.94□□□□□ -0.34
HERC2-206ENST00000564519 PRAMEF14Q5SWL7 426 aa12.94□□□□□ -0.34
HERC2-206ENST00000564519 TBC1D3GQ6DHY5 549 aa12.94□□□□□ -0.34
HERC2-206ENST00000564519 TBC1D3CQ6IPX1 549 aa12.94□□□□□ -0.34
HERC2-206ENST00000564519 IL27RAQ6UWB1 636 aa12.94□□□□□ -0.34
HERC2-206ENST00000564519 RAB44Q7Z6P3 723 aaPredicted RBP12.94□□□□□ -0.34
HERC2-206ENST00000564519 TBC1D3Q8IZP1 549 aaPredicted RBP12.94□□□□□ -0.34
HERC2-206ENST00000564519 RTL3Q8N8U3 475 aaKnown RBP12.94□□□□□ -0.34
HERC2-206ENST00000564519 NETO2Q8NC67 525 aa12.94□□□□□ -0.34
HERC2-206ENST00000564519 CPLX3Q8WVH0 158 aa12.94□□□□□ -0.34
HERC2-206ENST00000564519 PEBP4Q96S96 227 aa12.94□□□□□ -0.34
HERC2-206ENST00000564519 CEP44Q9C0F1 390 aa12.94□□□□□ -0.34
HERC2-206ENST00000564519 KLC2Q9H0B6 622 aa12.94□□□□□ -0.34
HERC2-206ENST00000564519 PARVAQ9NVD7 372 aa12.94□□□□□ -0.34
HERC2-206ENST00000564519 IFNKQ9P0W0 207 aa12.94□□□□□ -0.34
HERC2-206ENST00000564519 ARHGAP20Q9P2F6 1191 aa12.94□□□□□ -0.34
HERC2-206ENST00000564519 CNOT8Q9UFF9 292 aaKnown RBP12.94□□□□□ -0.34
HERC2-206ENST00000564519 CHD6Q8TD26 2715 aa12.94□□□□□ -0.34
HERC2-206ENST00000564519 WDFY3Q8IZQ1 3526 aa12.93□□□□□ -0.34
HERC2-206ENST00000564519 A0A1W2PQJ5 194 aa12.93□□□□□ -0.34
HERC2-206ENST00000564519 A0A1W2PR77 199 aa12.93□□□□□ -0.34
HERC2-206ENST00000564519 TMEM191CA6NGB0 347 aa12.93□□□□□ -0.34
HERC2-206ENST00000564519 H0Y8X5 98 aa12.93□□□□□ -0.34
HERC2-206ENST00000564519 GOLGA6L19H0YKK7 550 aa12.93□□□□□ -0.34
HERC2-206ENST00000564519 SLC7A4O43246 635 aa12.93□□□□□ -0.34
HERC2-206ENST00000564519 LATO43561 262 aa12.93□□□□□ -0.34
HERC2-206ENST00000564519 LEFTY1O75610 366 aa12.93□□□□□ -0.34
HERC2-206ENST00000564519 CER1O95813 267 aa12.93□□□□□ -0.34
HERC2-206ENST00000564519 FTH1P19P0C7X4 201 aa12.93□□□□□ -0.34
HERC2-206ENST00000564519 PTMSP20962 102 aa12.93□□□□□ -0.34
HERC2-206ENST00000564519 EPHB2P29323 1055 aa12.93□□□□□ -0.34
HERC2-206ENST00000564519 GKP32189 559 aa12.93□□□□□ -0.34
HERC2-206ENST00000564519 CTSKP43235 329 aa12.93□□□□□ -0.34
HERC2-206ENST00000564519 IL9RQ01113 521 aa12.93□□□□□ -0.34
HERC2-206ENST00000564519 SLC20A2Q08357 652 aa12.93□□□□□ -0.34
HERC2-206ENST00000564519 POLD3Q15054 466 aaPredicted RBP12.93□□□□□ -0.34
HERC2-206ENST00000564519 CARD16Q5EG05 197 aa12.93□□□□□ -0.34
HERC2-206ENST00000564519 PPP1R2P3Q6NXS1 205 aa12.93□□□□□ -0.34
HERC2-206ENST00000564519 ADAT2Q7Z6V5 191 aaKnown RBP12.93□□□□□ -0.34
HERC2-206ENST00000564519 TMIEQ8NEW7 156 aa12.93□□□□□ -0.34
HERC2-206ENST00000564519 OR6K2Q8NGY2 324 aa12.93□□□□□ -0.34
HERC2-206ENST00000564519 VOPP1Q96AW1 172 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms