RNA–Protein interactions for RNA: ENST00000563367.1

NME3-203, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 3

Gene NME3, Length 891 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-203ENST00000563367 FAM46CQ5VWP2 391 aa28.87■■■□□ 2.21
NME3-203ENST00000563367 NCEH1Q6PIU2 408 aa28.87■■■□□ 2.21
NME3-203ENST00000563367 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP28.87■■■□□ 2.21
NME3-203ENST00000563367 LEKR1Q6ZMV7 388 aa28.87■■■□□ 2.21
NME3-203ENST00000563367 TRIM5Q9C035 493 aa28.87■■■□□ 2.21
NME3-203ENST00000563367 CEP44Q9C0F1 390 aa28.87■■■□□ 2.21
NME3-203ENST00000563367 KLC2Q9H0B6 622 aa28.87■■■□□ 2.21
NME3-203ENST00000563367 TMEM9BQ9NQ34 198 aa28.87■■■□□ 2.21
NME3-203ENST00000563367 ZNHIT6Q9NWK9 470 aaKnown RBP28.87■■■□□ 2.21
NME3-203ENST00000563367 SUSD2Q9UGT4 822 aa28.87■■■□□ 2.21
NME3-203ENST00000563367 ANAPC7Q9UJX3 599 aa28.87■■■□□ 2.21
NME3-203ENST00000563367 CACNA1AO00555 2505 aa28.86■■■□□ 2.21
NME3-203ENST00000563367 KNL1Q8NG31 2342 aa28.86■■■□□ 2.21
NME3-203ENST00000563367 CNOT1A5YKK6 2376 aaKnown RBP28.86■■■□□ 2.21
NME3-203ENST00000563367 SSU72P8A0A1W2PR75 194 aa28.86■■■□□ 2.21
NME3-203ENST00000563367 FGF10O15520 208 aaPredicted RBP28.86■■■□□ 2.21
NME3-203ENST00000563367 KDELR3O43731 214 aa28.86■■■□□ 2.21
NME3-203ENST00000563367 IGHV4-34P06331 123 aa28.86■■■□□ 2.21
NME3-203ENST00000563367 GNSP15586 552 aa28.86■■■□□ 2.21
NME3-203ENST00000563367 HTR7P34969 479 aa28.86■■■□□ 2.21
NME3-203ENST00000563367 ADPRHP54922 357 aa28.86■■■□□ 2.21
NME3-203ENST00000563367 KIAA0895LQ68EN5 471 aa28.86■■■□□ 2.21
NME3-203ENST00000563367 DPY19L3Q6ZPD9 716 aa28.86■■■□□ 2.21
NME3-203ENST00000563367 UMODL1-AS1Q8N2C9 162 aa28.86■■■□□ 2.21
NME3-203ENST00000563367 FAM131CQ96AQ9 280 aa28.86■■■□□ 2.21
NME3-203ENST00000563367 HMCESQ96FZ2 354 aa28.86■■■□□ 2.21
NME3-203ENST00000563367 CCDC114Q96M63 670 aa28.86■■■□□ 2.21
NME3-203ENST00000563367 NCAPGQ9BPX3 1015 aa28.86■■■□□ 2.21
NME3-203ENST00000563367 PACSIN1Q9BY11 444 aa28.86■■■□□ 2.21
NME3-203ENST00000563367 HPCAL4Q9UM19 191 aa28.86■■■□□ 2.21
NME3-203ENST00000563367 FARP1Q9Y4F1 1045 aaPredicted RBP28.86■■■□□ 2.21
NME3-203ENST00000563367 CXorf51AA0A1B0GTR3 108 aa28.85■■■□□ 2.21
NME3-203ENST00000563367 A0A1B0GTW7 788 aa28.85■■■□□ 2.21
NME3-203ENST00000563367 EIF3CLB5ME19 914 aaKnown RBP28.85■■■□□ 2.21
NME3-203ENST00000563367 C10orf142B7Z368 130 aa28.85■■■□□ 2.21
NME3-203ENST00000563367 C1QTNF3-AMACRE9PGA6 284 aa28.85■■■□□ 2.21
NME3-203ENST00000563367 EEF2KO00418 725 aaKnown RBP28.85■■■□□ 2.21
NME3-203ENST00000563367 BCAT2O15382 392 aaPredicted RBP28.85■■■□□ 2.21
NME3-203ENST00000563367 MAPK8P45983 427 aa28.85■■■□□ 2.21
NME3-203ENST00000563367 CNTN1Q12860 1018 aa28.85■■■□□ 2.21
NME3-203ENST00000563367 PIGHQ14442 188 aaPredicted RBP28.85■■■□□ 2.21
NME3-203ENST00000563367 PSTKQ8IV42 348 aaKnown RBP28.85■■■□□ 2.21
NME3-203ENST00000563367 PCDH20Q8N6Y1 951 aaKnown RBP28.85■■■□□ 2.21
NME3-203ENST00000563367 NIPA2Q8N8Q9 360 aa28.85■■■□□ 2.21
NME3-203ENST00000563367 OR2T34Q8NGX1 318 aa28.85■■■□□ 2.21
NME3-203ENST00000563367 OR14C36Q8NHC7 312 aa28.85■■■□□ 2.21
NME3-203ENST00000563367 EIF3CQ99613 913 aaKnown RBP28.85■■■□□ 2.21
NME3-203ENST00000563367 ORAI3Q9BRQ5 295 aa28.85■■■□□ 2.21
NME3-203ENST00000563367 IP6K2Q9UHH9 426 aa28.85■■■□□ 2.21
NME3-203ENST00000563367 TP53BP1Q12888 1972 aaPredicted RBP28.84■■■□□ 2.21
NME3-203ENST00000563367 RASA4BC9J798 803 aa28.84■■■□□ 2.21
NME3-203ENST00000563367 RASA4O43374 803 aa28.84■■■□□ 2.21
NME3-203ENST00000563367 DNA2P51530 1060 aa28.84■■■□□ 2.21
NME3-203ENST00000563367 YBEYP58557 167 aaPredicted RBP28.84■■■□□ 2.21
NME3-203ENST00000563367 TSR1Q2NL82 804 aaKnown RBP28.84■■■□□ 2.21
NME3-203ENST00000563367 PPP6R3Q5H9R7 873 aaPredicted RBP28.84■■■□□ 2.21
NME3-203ENST00000563367 KCNT1Q5JUK3 1230 aa28.84■■■□□ 2.21
NME3-203ENST00000563367 TXNRD3NBQ6F5E7 133 aa28.84■■■□□ 2.21
NME3-203ENST00000563367 TMIEQ8NEW7 156 aa28.84■■■□□ 2.21
NME3-203ENST00000563367 DEF6Q9H4E7 631 aa28.84■■■□□ 2.21
NME3-203ENST00000563367 TMEM131Q92545 1883 aa28.83■■■□□ 2.21
NME3-203ENST00000563367 LRRC72A6NJI9 287 aa28.83■■■□□ 2.21
NME3-203ENST00000563367 ARHGAP33O14559 1287 aa28.83■■■□□ 2.21
NME3-203ENST00000563367 RECQLP46063 649 aaPredicted RBP28.83■■■□□ 2.21
NME3-203ENST00000563367 SMTNL2Q2TAL5 461 aa28.83■■■□□ 2.21
NME3-203ENST00000563367 CARD16Q5EG05 197 aa28.83■■■□□ 2.21
NME3-203ENST00000563367 ARSIQ5FYB1 569 aa28.83■■■□□ 2.21
NME3-203ENST00000563367 AGBL4Q5VU57 503 aa28.83■■■□□ 2.21
NME3-203ENST00000563367 RFX8Q6ZV50 586 aa28.83■■■□□ 2.21
NME3-203ENST00000563367 GAS2L3Q86XJ1 694 aa28.83■■■□□ 2.21
NME3-203ENST00000563367 ZNF354CQ86Y25 554 aa28.83■■■□□ 2.21
NME3-203ENST00000563367 OR2I1PQ8NGU4 316 aa28.83■■■□□ 2.21
NME3-203ENST00000563367 GRIN3AQ8TCU5 1115 aa28.83■■■□□ 2.21
NME3-203ENST00000563367 ARRDC3Q96B67 414 aa28.83■■■□□ 2.21
NME3-203ENST00000563367 GTPBP2Q9BX10 602 aaKnown RBP28.83■■■□□ 2.21
NME3-203ENST00000563367 LRRC19Q9H756 370 aa28.83■■■□□ 2.21
NME3-203ENST00000563367 ZWILCHQ9H900 591 aa28.83■■■□□ 2.21
NME3-203ENST00000563367 CWC15Q9P013 229 aaKnown RBP28.83■■■□□ 2.21
NME3-203ENST00000563367 IL36AQ9UHA7 158 aa28.83■■■□□ 2.21
NME3-203ENST00000563367 WASF2Q9Y6W5 498 aa28.83■■■□□ 2.21
NME3-203ENST00000563367 SPTBN2O15020 2390 aa28.83■■■□□ 2.21
NME3-203ENST00000563367 BUB1O43683 1085 aa28.82■■■□□ 2.2
NME3-203ENST00000563367 AKR1B10O60218 316 aa28.82■■■□□ 2.2
NME3-203ENST00000563367 CD27P26842 260 aa28.82■■■□□ 2.2
NME3-203ENST00000563367 GEMIN4P57678 1058 aaKnown RBP28.82■■■□□ 2.2
NME3-203ENST00000563367 SERINC3Q13530 473 aa28.82■■■□□ 2.2
NME3-203ENST00000563367 PARP15Q460N3 678 aa28.82■■■□□ 2.2
NME3-203ENST00000563367 ERMP1Q7Z2K6 904 aa28.82■■■□□ 2.2
NME3-203ENST00000563367 ZNF564Q8TBZ8 553 aaPredicted RBP28.82■■■□□ 2.2
NME3-203ENST00000563367 ISG20Q96AZ6 181 aaKnown RBP28.82■■■□□ 2.2
NME3-203ENST00000563367 CELF6Q96J87 481 aaKnown RBP28.82■■■□□ 2.2
NME3-203ENST00000563367 TM6SF2Q9BZW4 377 aa28.82■■■□□ 2.2
NME3-203ENST00000563367 NHEJ1Q9H9Q4 299 aaPredicted RBP28.82■■■□□ 2.2
NME3-203ENST00000563367 EBF2Q9HAK2 575 aa28.82■■■□□ 2.2
NME3-203ENST00000563367 AKR1B15C9JRZ8 316 aaPredicted RBP28.81■■■□□ 2.2
NME3-203ENST00000563367 MYO1FO00160 1098 aa28.81■■■□□ 2.2
NME3-203ENST00000563367 KPNA3O00505 521 aaPredicted RBP28.81■■■□□ 2.2
NME3-203ENST00000563367 SLC7A4O43246 635 aa28.81■■■□□ 2.2
NME3-203ENST00000563367 LEFTY1O75610 366 aa28.81■■■□□ 2.2
NME3-203ENST00000563367 PRNPP04156 253 aa28.81■■■□□ 2.2
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms