RNA–Protein interactions for RNA: ENST00000563109.1

RAB40C-207, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 710 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-207ENST00000563109 NAP1L3Q99457 506 aaPredicted RBP19.17■□□□□ 0.66
RAB40C-207ENST00000563109 CINPQ9BW66 212 aaPredicted RBP19.17■□□□□ 0.66
RAB40C-207ENST00000563109 SPATA6Q9NWH7 488 aaPredicted RBP19.17■□□□□ 0.66
RAB40C-207ENST00000563109 SAE1Q9UBE0 346 aaPredicted RBP19.17■□□□□ 0.66
RAB40C-207ENST00000563109 FCF1Q9Y324 198 aaKnown RBP19.17■□□□□ 0.66
RAB40C-207ENST00000563109 CKAP5Q14008 2032 aa19.17■□□□□ 0.66
RAB40C-207ENST00000563109 HACD1B0YJ81 288 aa19.16■□□□□ 0.66
RAB40C-207ENST00000563109 H7C0C1 242 aa19.16■□□□□ 0.66
RAB40C-207ENST00000563109 K7ERQ8 282 aa19.16■□□□□ 0.66
RAB40C-207ENST00000563109 KIF2AO00139 706 aaPredicted RBP19.16■□□□□ 0.66
RAB40C-207ENST00000563109 ZBTB24O43167 697 aaPredicted RBP19.16■□□□□ 0.66
RAB40C-207ENST00000563109 GPR37L1O60883 481 aa19.16■□□□□ 0.66
RAB40C-207ENST00000563109 ADAM23O75077 832 aa19.16■□□□□ 0.66
RAB40C-207ENST00000563109 FGGP02679 453 aa19.16■□□□□ 0.66
RAB40C-207ENST00000563109 ATP5OP48047 213 aa19.16■□□□□ 0.66
RAB40C-207ENST00000563109 EIF3EP60228 445 aaKnown RBP19.16■□□□□ 0.66
RAB40C-207ENST00000563109 RHOAP61586 193 aa19.16■□□□□ 0.66
RAB40C-207ENST00000563109 MTAPQ13126 283 aa19.16■□□□□ 0.66
RAB40C-207ENST00000563109 XRCC4Q13426 336 aa19.16■□□□□ 0.66
RAB40C-207ENST00000563109 GAS6Q14393 721 aa19.16■□□□□ 0.66
RAB40C-207ENST00000563109 LBRQ14739 615 aaKnown RBP19.16■□□□□ 0.66
RAB40C-207ENST00000563109 LONRF2Q1L5Z9 754 aa19.16■□□□□ 0.66
RAB40C-207ENST00000563109 ZC3H18Q86VM9 953 aaKnown RBP19.16■□□□□ 0.66
RAB40C-207ENST00000563109 CDKL3Q8IVW4 592 aaPredicted RBP19.16■□□□□ 0.66
RAB40C-207ENST00000563109 TMEM105Q8N8V8 129 aa19.16■□□□□ 0.66
RAB40C-207ENST00000563109 FATE1Q969F0 183 aa19.16■□□□□ 0.66
RAB40C-207ENST00000563109 ISG20Q96AZ6 181 aaKnown RBP19.16■□□□□ 0.66
RAB40C-207ENST00000563109 LGMNQ99538 433 aa19.16■□□□□ 0.66
RAB40C-207ENST00000563109 FERMT1Q9BQL6 677 aa19.16■□□□□ 0.66
RAB40C-207ENST00000563109 FRMD8P1Q9BZ68 369 aaPredicted RBP19.16■□□□□ 0.66
RAB40C-207ENST00000563109 FBRSQ9HAH7 460 aa19.16■□□□□ 0.66
RAB40C-207ENST00000563109 POLMQ9NP87 494 aaPredicted RBP19.16■□□□□ 0.66
RAB40C-207ENST00000563109 SEPT3Q9UH03 358 aa19.16■□□□□ 0.66
RAB40C-207ENST00000563109 FARP1Q9Y4F1 1045 aaPredicted RBP19.16■□□□□ 0.66
RAB40C-207ENST00000563109 ACTL7AQ9Y615 435 aa19.16■□□□□ 0.66
RAB40C-207ENST00000563109 SAR1BQ9Y6B6 198 aa19.16■□□□□ 0.66
RAB40C-207ENST00000563109 MYO18AQ92614 2054 aaKnown RBP19.16■□□□□ 0.66
RAB40C-207ENST00000563109 KMT2EQ8IZD2 1858 aa19.16■□□□□ 0.66
RAB40C-207ENST00000563109 TARSL2A2RTX5 802 aaKnown RBP19.15■□□□□ 0.66
RAB40C-207ENST00000563109 WASH3PC4AMC7 463 aa19.15■□□□□ 0.66
RAB40C-207ENST00000563109 PGRMC1O00264 195 aaKnown RBP19.15■□□□□ 0.66
RAB40C-207ENST00000563109 MATN3O15232 486 aa19.15■□□□□ 0.66
RAB40C-207ENST00000563109 MTSS1O43312 755 aa19.15■□□□□ 0.66
RAB40C-207ENST00000563109 SMAD6O43541 496 aaKnown RBP19.15■□□□□ 0.66
RAB40C-207ENST00000563109 ZNF189O75820 626 aaPredicted RBP19.15■□□□□ 0.66
RAB40C-207ENST00000563109 TUBB4AP04350 444 aa19.15■□□□□ 0.66
RAB40C-207ENST00000563109 DEKP35659 375 aaKnown RBP19.15■□□□□ 0.66
RAB40C-207ENST00000563109 RENBPP51606 427 aa19.15■□□□□ 0.66
RAB40C-207ENST00000563109 DGKEP52429 567 aa19.15■□□□□ 0.66
RAB40C-207ENST00000563109 MARC1Q5VT66 337 aa19.15■□□□□ 0.66
RAB40C-207ENST00000563109 PAPD7Q5XG87 772 aaKnown RBP19.15■□□□□ 0.66
RAB40C-207ENST00000563109 Q6ZVU0 165 aa19.15■□□□□ 0.66
RAB40C-207ENST00000563109 ADAT2Q7Z6V5 191 aaKnown RBP19.15■□□□□ 0.66
RAB40C-207ENST00000563109 FRS2Q8WU20 508 aa19.15■□□□□ 0.66
RAB40C-207ENST00000563109 QKIQ96PU8 341 aaKnown RBP eCLIP19.15■□□□□ 0.66
RAB40C-207ENST00000563109 C11orf16Q9NQ32 467 aa19.15■□□□□ 0.66
RAB40C-207ENST00000563109 TCRBV7S2A1N4TA0A589 114 aa19.14■□□□□ 0.65
RAB40C-207ENST00000563109 BNIP3LO60238 219 aa19.14■□□□□ 0.65
RAB40C-207ENST00000563109 SIN3BO75182 1162 aa19.14■□□□□ 0.65
RAB40C-207ENST00000563109 ALDH1A2O94788 518 aa19.14■□□□□ 0.65
RAB40C-207ENST00000563109 CD160O95971 181 aa19.14■□□□□ 0.65
RAB40C-207ENST00000563109 IGSF6O95976 241 aa19.14■□□□□ 0.65
RAB40C-207ENST00000563109 GSRP00390 522 aa19.14■□□□□ 0.65
RAB40C-207ENST00000563109 PRLRP16471 622 aa19.14■□□□□ 0.65
RAB40C-207ENST00000563109 HSPA9P38646 679 aaKnown RBP19.14■□□□□ 0.65
RAB40C-207ENST00000563109 MMP13P45452 471 aa19.14■□□□□ 0.65
RAB40C-207ENST00000563109 CXCL12P48061 93 aa19.14■□□□□ 0.65
RAB40C-207ENST00000563109 SNRPD1P62314 119 aaKnown RBP19.14■□□□□ 0.65
RAB40C-207ENST00000563109 PRKD1Q15139 912 aaPredicted RBP19.14■□□□□ 0.65
RAB40C-207ENST00000563109 CRY1Q16526 586 aa19.14■□□□□ 0.65
RAB40C-207ENST00000563109 SLC45A4Q5BKX6 768 aa19.14■□□□□ 0.65
RAB40C-207ENST00000563109 HEATR6Q6AI08 1181 aaKnown RBP19.14■□□□□ 0.65
RAB40C-207ENST00000563109 RASGEF1CQ8N431 466 aa19.14■□□□□ 0.65
RAB40C-207ENST00000563109 DTWD2Q8NBA8 298 aa19.14■□□□□ 0.65
RAB40C-207ENST00000563109 TSTD1Q8NFU3 115 aa19.14■□□□□ 0.65
RAB40C-207ENST00000563109 COG1Q8WTW3 980 aa19.14■□□□□ 0.65
RAB40C-207ENST00000563109 GDAP1L1Q96MZ0 367 aa19.14■□□□□ 0.65
RAB40C-207ENST00000563109 TM6SF2Q9BZW4 377 aa19.14■□□□□ 0.65
RAB40C-207ENST00000563109 TNKS2Q9H2K2 1166 aa19.14■□□□□ 0.65
RAB40C-207ENST00000563109 SEPT10Q9P0V9 454 aa19.14■□□□□ 0.65
RAB40C-207ENST00000563109 A0A1W2PQF6 199 aa19.13■□□□□ 0.65
RAB40C-207ENST00000563109 TCRBV21S2A2A0A5A6 115 aa19.13■□□□□ 0.65
RAB40C-207ENST00000563109 DLL1O00548 723 aa19.13■□□□□ 0.65
RAB40C-207ENST00000563109 LAMTOR5O43504 91 aa19.13■□□□□ 0.65
RAB40C-207ENST00000563109 RNASEH1O60930 286 aaKnown RBP19.13■□□□□ 0.65
RAB40C-207ENST00000563109 RBP3P10745 1247 aa19.13■□□□□ 0.65
RAB40C-207ENST00000563109 CCNB1P14635 433 aa19.13■□□□□ 0.65
RAB40C-207ENST00000563109 AVPR2P30518 371 aa19.13■□□□□ 0.65
RAB40C-207ENST00000563109 SLC10A7Q0GE19 358 aa19.13■□□□□ 0.65
RAB40C-207ENST00000563109 CAMK2GQ13555 558 aaPredicted RBP19.13■□□□□ 0.65
RAB40C-207ENST00000563109 HNRNPDQ14103 355 aaKnown RBP19.13■□□□□ 0.65
RAB40C-207ENST00000563109 ELAVL3Q14576 367 aaKnown RBP19.13■□□□□ 0.65
RAB40C-207ENST00000563109 CYTH1Q15438 398 aa19.13■□□□□ 0.65
RAB40C-207ENST00000563109 DARS2Q6PI48 645 aaKnown RBP19.13■□□□□ 0.65
RAB40C-207ENST00000563109 MAMSTRQ6ZN01 415 aa19.13■□□□□ 0.65
RAB40C-207ENST00000563109 DSG4Q86SJ6 1040 aa19.13■□□□□ 0.65
RAB40C-207ENST00000563109 RYBPQ8N488 228 aaPredicted RBP19.13■□□□□ 0.65
RAB40C-207ENST00000563109 OR2AP1Q8NGE2 309 aa19.13■□□□□ 0.65
RAB40C-207ENST00000563109 LRRN4Q8WUT4 740 aa19.13■□□□□ 0.65
RAB40C-207ENST00000563109 OR8D1Q8WZ84 308 aa19.13■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms