RNA–Protein interactions for RNA: ENST00000562866.1

VPS9D1-AS1-202, VPS9D1 antisense RNA 1, humanhuman

TSL 2 BASIC

Gene VPS9D1-AS1, Length 1,753 nt, Biotype antisense RNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-AS1-202ENST00000562866 LCA5Q86VQ0 697 aa21.68■■□□□ 1.06
VPS9D1-AS1-202ENST00000562866 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP21.68■■□□□ 1.06
VPS9D1-AS1-202ENST00000562866 TTC9BQ8N6N2 239 aa21.68■■□□□ 1.06
VPS9D1-AS1-202ENST00000562866 PPP4R1Q8TF05 950 aa21.68■■□□□ 1.06
VPS9D1-AS1-202ENST00000562866 NSL1Q96IY1 281 aa21.68■■□□□ 1.06
VPS9D1-AS1-202ENST00000562866 VPS39Q96JC1 886 aa21.68■■□□□ 1.06
VPS9D1-AS1-202ENST00000562866 MCMBPQ9BTE3 642 aa21.68■■□□□ 1.06
VPS9D1-AS1-202ENST00000562866 RHOJQ9H4E5 214 aa21.68■■□□□ 1.06
VPS9D1-AS1-202ENST00000562866 NOL6Q9H6R4 1146 aaKnown RBP21.68■■□□□ 1.06
VPS9D1-AS1-202ENST00000562866 COPG2Q9UBF2 871 aa21.68■■□□□ 1.06
VPS9D1-AS1-202ENST00000562866 TCAF1Q9Y4C2 921 aa21.68■■□□□ 1.06
VPS9D1-AS1-202ENST00000562866 A0A096LPK6 155 aa21.67■■□□□ 1.06
VPS9D1-AS1-202ENST00000562866 TBC1D4O60343 1298 aa21.67■■□□□ 1.06
VPS9D1-AS1-202ENST00000562866 FKTNO75072 461 aa21.67■■□□□ 1.06
VPS9D1-AS1-202ENST00000562866 CPA3P15088 417 aa21.67■■□□□ 1.06
VPS9D1-AS1-202ENST00000562866 SLC1A6P48664 564 aa21.67■■□□□ 1.06
VPS9D1-AS1-202ENST00000562866 GATMP50440 423 aa21.67■■□□□ 1.06
VPS9D1-AS1-202ENST00000562866 PSMD5Q16401 504 aa21.67■■□□□ 1.06
VPS9D1-AS1-202ENST00000562866 CES4AQ5XG92 561 aa21.67■■□□□ 1.06
VPS9D1-AS1-202ENST00000562866 CMC1Q7Z7K0 106 aa21.67■■□□□ 1.06
VPS9D1-AS1-202ENST00000562866 WDR75Q8IWA0 830 aaKnown RBP21.67■■□□□ 1.06
VPS9D1-AS1-202ENST00000562866 CNTN4Q8IWV2 1026 aa21.67■■□□□ 1.06
VPS9D1-AS1-202ENST00000562866 SLC7A6OSQ96CW6 309 aaPredicted RBP21.67■■□□□ 1.06
VPS9D1-AS1-202ENST00000562866 CDK5RAP1Q96SZ6 601 aaKnown RBP21.67■■□□□ 1.06
VPS9D1-AS1-202ENST00000562866 GPR22Q99680 433 aa21.67■■□□□ 1.06
VPS9D1-AS1-202ENST00000562866 STN1Q9H668 368 aaKnown RBP21.67■■□□□ 1.06
VPS9D1-AS1-202ENST00000562866 TMEM216Q9P0N5 145 aa21.67■■□□□ 1.06
VPS9D1-AS1-202ENST00000562866 SLC27A5Q9Y2P5 690 aa21.67■■□□□ 1.06
VPS9D1-AS1-202ENST00000562866 FCHO1O14526 889 aa21.66■■□□□ 1.06
VPS9D1-AS1-202ENST00000562866 CCDC22O60826 627 aa21.66■■□□□ 1.06
VPS9D1-AS1-202ENST00000562866 PMPCBO75439 489 aa21.66■■□□□ 1.06
VPS9D1-AS1-202ENST00000562866 IGLV3-27P01718 113 aa21.66■■□□□ 1.06
VPS9D1-AS1-202ENST00000562866 APOA4P06727 396 aa21.66■■□□□ 1.06
VPS9D1-AS1-202ENST00000562866 DNAJB1P25685 340 aa21.66■■□□□ 1.06
VPS9D1-AS1-202ENST00000562866 RANBP10Q6VN20 620 aa21.66■■□□□ 1.06
VPS9D1-AS1-202ENST00000562866 CLEC14AQ86T13 490 aa21.66■■□□□ 1.06
VPS9D1-AS1-202ENST00000562866 DDX51Q8N8A6 666 aaKnown RBP eCLIP21.66■■□□□ 1.06
VPS9D1-AS1-202ENST00000562866 GPR152Q8TDT2 470 aa21.66■■□□□ 1.06
VPS9D1-AS1-202ENST00000562866 ATXN7L3BQ96GX2 97 aa21.66■■□□□ 1.06
VPS9D1-AS1-202ENST00000562866 ZNF419Q96HQ0 510 aaPredicted RBP21.66■■□□□ 1.06
VPS9D1-AS1-202ENST00000562866 B3GALT6Q96L58 329 aa21.66■■□□□ 1.06
VPS9D1-AS1-202ENST00000562866 CEP295NLQ96MC4 621 aa21.66■■□□□ 1.06
VPS9D1-AS1-202ENST00000562866 TSNARE1Q96NA8 513 aa21.66■■□□□ 1.06
VPS9D1-AS1-202ENST00000562866 TTPALQ9BTX7 342 aa21.66■■□□□ 1.06
VPS9D1-AS1-202ENST00000562866 SP110Q9HB58 689 aa21.66■■□□□ 1.06
VPS9D1-AS1-202ENST00000562866 VPS45Q9NRW7 570 aa21.66■■□□□ 1.06
VPS9D1-AS1-202ENST00000562866 VWA8A3KMH1 1905 aa21.66■■□□□ 1.06
VPS9D1-AS1-202ENST00000562866 SLC12A8A0AV02 714 aa21.66■■□□□ 1.06
VPS9D1-AS1-202ENST00000562866 DRGXA6NNA5 263 aa21.66■■□□□ 1.06
VPS9D1-AS1-202ENST00000562866 H2AFYO75367 372 aaKnown RBP21.66■■□□□ 1.06
VPS9D1-AS1-202ENST00000562866 WFS1O76024 890 aa21.66■■□□□ 1.06
VPS9D1-AS1-202ENST00000562866 PRKCGP05129 697 aa21.66■■□□□ 1.06
VPS9D1-AS1-202ENST00000562866 GALTP07902 379 aa21.66■■□□□ 1.06
VPS9D1-AS1-202ENST00000562866 CALB2P22676 271 aa21.66■■□□□ 1.06
VPS9D1-AS1-202ENST00000562866 MAP2K2P36507 400 aa21.66■■□□□ 1.06
VPS9D1-AS1-202ENST00000562866 TNK2Q07912 1038 aa21.66■■□□□ 1.06
VPS9D1-AS1-202ENST00000562866 POU6F1Q14863 301 aa21.66■■□□□ 1.06
VPS9D1-AS1-202ENST00000562866 MARC1Q5VT66 337 aa21.66■■□□□ 1.06
VPS9D1-AS1-202ENST00000562866 RNF19BQ6ZMZ0 732 aa21.66■■□□□ 1.06
VPS9D1-AS1-202ENST00000562866 ZCCHC23Q6ZST2 131 aa21.66■■□□□ 1.06
VPS9D1-AS1-202ENST00000562866 TFAP2DQ7Z6R9 452 aa21.66■■□□□ 1.06
VPS9D1-AS1-202ENST00000562866 MIB1Q86YT6 1006 aa21.66■■□□□ 1.06
VPS9D1-AS1-202ENST00000562866 C10orf107Q8IVU9 208 aa21.66■■□□□ 1.06
VPS9D1-AS1-202ENST00000562866 AZIN2Q96A70 460 aa21.66■■□□□ 1.06
VPS9D1-AS1-202ENST00000562866 HMCESQ96FZ2 354 aa21.66■■□□□ 1.06
VPS9D1-AS1-202ENST00000562866 MRGPRX2Q96LB1 330 aa21.66■■□□□ 1.06
VPS9D1-AS1-202ENST00000562866 TLK1Q9UKI8 766 aa21.66■■□□□ 1.06
VPS9D1-AS1-202ENST00000562866 PEX11BO96011 259 aa21.65■■□□□ 1.06
VPS9D1-AS1-202ENST00000562866 ZDHHC11BP0C7U3 371 aa21.65■■□□□ 1.06
VPS9D1-AS1-202ENST00000562866 RALBP11234 206 aa21.65■■□□□ 1.06
VPS9D1-AS1-202ENST00000562866 KCNA4P22459 653 aa21.65■■□□□ 1.06
VPS9D1-AS1-202ENST00000562866 AQP5P55064 265 aa21.65■■□□□ 1.06
VPS9D1-AS1-202ENST00000562866 WNT3AP56704 352 aa21.65■■□□□ 1.06
VPS9D1-AS1-202ENST00000562866 TBCCQ15814 346 aa21.65■■□□□ 1.06
VPS9D1-AS1-202ENST00000562866 PARP15Q460N3 678 aa21.65■■□□□ 1.06
VPS9D1-AS1-202ENST00000562866 RASIP1Q5U651 963 aa21.65■■□□□ 1.06
VPS9D1-AS1-202ENST00000562866 ZC3HC1Q86WB0 502 aaKnown RBP21.65■■□□□ 1.06
VPS9D1-AS1-202ENST00000562866 GABPB2Q8TAK5 448 aaPredicted RBP21.65■■□□□ 1.06
VPS9D1-AS1-202ENST00000562866 PIWIL2Q8TC59 973 aaKnown RBP21.65■■□□□ 1.06
VPS9D1-AS1-202ENST00000562866 PTCD3Q96EY7 689 aaKnown RBP21.65■■□□□ 1.06
VPS9D1-AS1-202ENST00000562866 IMP4Q96G21 291 aaKnown RBP21.65■■□□□ 1.06
VPS9D1-AS1-202ENST00000562866 UBE2OQ9C0C9 1292 aaKnown RBP21.65■■□□□ 1.06
VPS9D1-AS1-202ENST00000562866 TLE6Q9H808 572 aa21.65■■□□□ 1.06
VPS9D1-AS1-202ENST00000562866 ARNT2Q9HBZ2 717 aa21.65■■□□□ 1.06
VPS9D1-AS1-202ENST00000562866 FBXO6Q9NRD1 293 aaPredicted RBP21.65■■□□□ 1.06
VPS9D1-AS1-202ENST00000562866 NYNRINQ9P2P1 1898 aaKnown RBP21.65■■□□□ 1.06
VPS9D1-AS1-202ENST00000562866 FNDC1Q4ZHG4 1894 aaPredicted RBP21.64■■□□□ 1.06
VPS9D1-AS1-202ENST00000562866 TBKBP1A7MCY6 615 aa21.64■■□□□ 1.06
VPS9D1-AS1-202ENST00000562866 SIN3BO75182 1162 aa21.64■■□□□ 1.06
VPS9D1-AS1-202ENST00000562866 SOAT2O75908 522 aa21.64■■□□□ 1.06
VPS9D1-AS1-202ENST00000562866 C2P06681 752 aa21.64■■□□□ 1.06
VPS9D1-AS1-202ENST00000562866 RTP2Q5QGT7 225 aa21.64■■□□□ 1.06
VPS9D1-AS1-202ENST00000562866 RAP1GAP2Q684P5 730 aa21.64■■□□□ 1.06
VPS9D1-AS1-202ENST00000562866 FBXL22Q6P050 247 aa21.64■■□□□ 1.06
VPS9D1-AS1-202ENST00000562866 KDELC1Q6UW63 502 aa21.64■■□□□ 1.06
VPS9D1-AS1-202ENST00000562866 LONP2Q86WA8 852 aa21.64■■□□□ 1.06
VPS9D1-AS1-202ENST00000562866 LRRC43Q8N309 656 aa21.64■■□□□ 1.06
VPS9D1-AS1-202ENST00000562866 RDH11Q8TC12 318 aa21.64■■□□□ 1.06
VPS9D1-AS1-202ENST00000562866 FAM167BQ9BTA0 163 aa21.64■■□□□ 1.06
VPS9D1-AS1-202ENST00000562866 TBC1D10AQ9BXI6 508 aa21.64■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms