RNA–Protein interactions for RNA: ENST00000561978.1

PCAT1-202, prostate cancer associated transcript 1, humanhuman

TSL 1 (best) BASIC

Gene PCAT1, Length 1,992 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCAT1-202ENST00000561978 TXNDC16Q9P2K2 825 aa11.84□□□□□ -0.51
PCAT1-202ENST00000561978 IRAK3Q9Y616 596 aa11.84□□□□□ -0.51
PCAT1-202ENST00000561978 TRIOO75962 3097 aa11.84□□□□□ -0.51
PCAT1-202ENST00000561978 KCNK1O00180 336 aa11.83□□□□□ -0.52
PCAT1-202ENST00000561978 TEX28O15482 410 aa11.83□□□□□ -0.52
PCAT1-202ENST00000561978 FGF10O15520 208 aaPredicted RBP11.83□□□□□ -0.52
PCAT1-202ENST00000561978 LINC01565O15544 149 aa11.83□□□□□ -0.52
PCAT1-202ENST00000561978 LILRB3O75022 631 aa11.83□□□□□ -0.52
PCAT1-202ENST00000561978 LRIG2O94898 1065 aa11.83□□□□□ -0.52
PCAT1-202ENST00000561978 IGLV3-25P01717 112 aa11.83□□□□□ -0.52
PCAT1-202ENST00000561978 CCR1P32246 355 aa11.83□□□□□ -0.52
PCAT1-202ENST00000561978 RASSF2P50749 326 aa11.83□□□□□ -0.52
PCAT1-202ENST00000561978 MGAT5Q09328 741 aa11.83□□□□□ -0.52
PCAT1-202ENST00000561978 NIPAL4Q0D2K0 466 aa11.83□□□□□ -0.52
PCAT1-202ENST00000561978 EIF4EBP2Q13542 120 aaPredicted RBP11.83□□□□□ -0.52
PCAT1-202ENST00000561978 CRYMQ14894 314 aa11.83□□□□□ -0.52
PCAT1-202ENST00000561978 RSPO2Q6UXX9 243 aaPredicted RBP11.83□□□□□ -0.52
PCAT1-202ENST00000561978 KYAT3Q6YP21 454 aaKnown RBP11.83□□□□□ -0.52
PCAT1-202ENST00000561978 PARP9Q8IXQ6 854 aa11.83□□□□□ -0.52
PCAT1-202ENST00000561978 PTCD2Q8WV60 388 aaKnown RBP11.83□□□□□ -0.52
PCAT1-202ENST00000561978 C10orf82Q8WW14 230 aa11.83□□□□□ -0.52
PCAT1-202ENST00000561978 KLHL29Q96CT2 875 aa11.83□□□□□ -0.52
PCAT1-202ENST00000561978 PPP1R2P1Q96PQ5 205 aa11.83□□□□□ -0.52
PCAT1-202ENST00000561978 TUBB6Q9BUF5 446 aa11.83□□□□□ -0.52
PCAT1-202ENST00000561978 RHOBTB2Q9BYZ6 727 aa11.83□□□□□ -0.52
PCAT1-202ENST00000561978 GBA3Q9H227 469 aa11.83□□□□□ -0.52
PCAT1-202ENST00000561978 CATSPERBQ9H7T0 1116 aa11.83□□□□□ -0.52
PCAT1-202ENST00000561978 PRDM6Q9NQX0 595 aa11.83□□□□□ -0.52
PCAT1-202ENST00000561978 STK39Q9UEW8 545 aa11.83□□□□□ -0.52
PCAT1-202ENST00000561978 GGT7Q9UJ14 662 aa11.83□□□□□ -0.52
PCAT1-202ENST00000561978 MYO18AQ92614 2054 aaKnown RBP11.83□□□□□ -0.52
PCAT1-202ENST00000561978 I6L893 689 aaPredicted RBP11.83□□□□□ -0.52
PCAT1-202ENST00000561978 BIRC5O15392 142 aa11.83□□□□□ -0.52
PCAT1-202ENST00000561978 IRAK2O43187 625 aa11.83□□□□□ -0.52
PCAT1-202ENST00000561978 OAZ2O95190 189 aa11.83□□□□□ -0.52
PCAT1-202ENST00000561978 CCNB1P14635 433 aa11.83□□□□□ -0.52
PCAT1-202ENST00000561978 CCNCP24863 283 aa11.83□□□□□ -0.52
PCAT1-202ENST00000561978 NCALDP61601 193 aa11.83□□□□□ -0.52
PCAT1-202ENST00000561978 PSMD5Q16401 504 aa11.83□□□□□ -0.52
PCAT1-202ENST00000561978 NFE2Q16621 373 aaPredicted RBP11.83□□□□□ -0.52
PCAT1-202ENST00000561978 FAM182AQ5T1J6 154 aa11.83□□□□□ -0.52
PCAT1-202ENST00000561978 MROH9Q5TGP6 573 aa11.83□□□□□ -0.52
PCAT1-202ENST00000561978 ICE2Q659A1 982 aa11.83□□□□□ -0.52
PCAT1-202ENST00000561978 PDE12Q6L8Q7 609 aaKnown RBP11.83□□□□□ -0.52
PCAT1-202ENST00000561978 SUGP1Q8IWZ8 645 aaKnown RBP11.83□□□□□ -0.52
PCAT1-202ENST00000561978 NDUFAF2Q8N183 169 aa11.83□□□□□ -0.52
PCAT1-202ENST00000561978 ARHGAP18Q8N392 663 aa11.83□□□□□ -0.52
PCAT1-202ENST00000561978 FUBP3Q96I24 572 aaKnown RBP eCLIP11.83□□□□□ -0.52
PCAT1-202ENST00000561978 TEKT5Q96M29 485 aa11.83□□□□□ -0.52
PCAT1-202ENST00000561978 TSGA13Q96PP4 275 aa11.83□□□□□ -0.52
PCAT1-202ENST00000561978 CEP41Q9BYV8 373 aa11.83□□□□□ -0.52
PCAT1-202ENST00000561978 SLC13A1Q9BZW2 595 aa11.83□□□□□ -0.52
PCAT1-202ENST00000561978 DCDC2Q9UHG0 476 aa11.83□□□□□ -0.52
PCAT1-202ENST00000561978 MTO1Q9Y2Z2 717 aaKnown RBP11.83□□□□□ -0.52
PCAT1-202ENST00000561978 CDY1Q9Y6F8 540 aa11.83□□□□□ -0.52
PCAT1-202ENST00000561978 NCOR1O75376 2440 aa11.82□□□□□ -0.52
PCAT1-202ENST00000561978 TNFRSF10BO14763 440 aa11.82□□□□□ -0.52
PCAT1-202ENST00000561978 SYN3O14994 580 aa11.82□□□□□ -0.52
PCAT1-202ENST00000561978 ZBTB24O43167 697 aaPredicted RBP11.82□□□□□ -0.52
PCAT1-202ENST00000561978 ADAM12O43184 909 aa11.82□□□□□ -0.52
PCAT1-202ENST00000561978 MGRN1O60291 552 aa11.82□□□□□ -0.52
PCAT1-202ENST00000561978 HNRNPCL1O60812 293 aaKnown RBP11.82□□□□□ -0.52
PCAT1-202ENST00000561978 UNC5CO95185 931 aa11.82□□□□□ -0.52
PCAT1-202ENST00000561978 SPATA31D3P0C874 917 aa11.82□□□□□ -0.52
PCAT1-202ENST00000561978 NQO1P15559 274 aaKnown RBP11.82□□□□□ -0.52
PCAT1-202ENST00000561978 SLC5A3P53794 718 aa11.82□□□□□ -0.52
PCAT1-202ENST00000561978 DLX2Q07687 328 aaPredicted RBP11.82□□□□□ -0.52
PCAT1-202ENST00000561978 BIRC2Q13490 618 aa11.82□□□□□ -0.52
PCAT1-202ENST00000561978 PPP2R5DQ14738 602 aa11.82□□□□□ -0.52
PCAT1-202ENST00000561978 PUS10Q3MIT2 529 aaKnown RBP11.82□□□□□ -0.52
PCAT1-202ENST00000561978 GRTP1Q5TC63 336 aa11.82□□□□□ -0.52
PCAT1-202ENST00000561978 PACS1Q6VY07 963 aa11.82□□□□□ -0.52
PCAT1-202ENST00000561978 SPATA31D4Q6ZUB0 917 aa11.82□□□□□ -0.52
PCAT1-202ENST00000561978 LINC00523Q86TU6 105 aa11.82□□□□□ -0.52
PCAT1-202ENST00000561978 LRRC49Q8IUZ0 686 aa11.82□□□□□ -0.52
PCAT1-202ENST00000561978 DNAAF3Q8N9W5 541 aa11.82□□□□□ -0.52
PCAT1-202ENST00000561978 VN1R2Q8NFZ6 395 aa11.82□□□□□ -0.52
PCAT1-202ENST00000561978 PPP2R3CQ969Q6 453 aa11.82□□□□□ -0.52
PCAT1-202ENST00000561978 KLHL5Q96PQ7 755 aa11.82□□□□□ -0.52
PCAT1-202ENST00000561978 CPNE1Q99829 537 aa11.82□□□□□ -0.52
PCAT1-202ENST00000561978 CLSTN3Q9BQT9 956 aa11.82□□□□□ -0.52
PCAT1-202ENST00000561978 EMILIN2Q9BXX0 1053 aa11.82□□□□□ -0.52
PCAT1-202ENST00000561978 SMOC2Q9H3U7 446 aa11.82□□□□□ -0.52
PCAT1-202ENST00000561978 FBXO44Q9H4M3 255 aa11.82□□□□□ -0.52
PCAT1-202ENST00000561978 NPHS2Q9NP85 383 aa11.82□□□□□ -0.52
PCAT1-202ENST00000561978 CASS4Q9NQ75 786 aa11.82□□□□□ -0.52
PCAT1-202ENST00000561978 ARHGEF3Q9NR81 526 aa11.82□□□□□ -0.52
PCAT1-202ENST00000561978 SYBUQ9NX95 663 aa11.82□□□□□ -0.52
PCAT1-202ENST00000561978 CLDND1Q9NY35 253 aa11.82□□□□□ -0.52
PCAT1-202ENST00000561978 ZFATQ9P243 1243 aa11.82□□□□□ -0.52
PCAT1-202ENST00000561978 VANGL2Q9ULK5 521 aa11.82□□□□□ -0.52
PCAT1-202ENST00000561978 AAR2Q9Y312 384 aaKnown RBP11.82□□□□□ -0.52
PCAT1-202ENST00000561978 HCFC2Q9Y5Z7 792 aa11.82□□□□□ -0.52
PCAT1-202ENST00000561978 PLXNA3P51805 1871 aa11.82□□□□□ -0.52
PCAT1-202ENST00000561978 DOCK6Q96HP0 2047 aa11.82□□□□□ -0.52
PCAT1-202ENST00000561978 ARHGAP42A6NI28 874 aa11.81□□□□□ -0.52
PCAT1-202ENST00000561978 F5H423 210 aaPredicted RBP11.81□□□□□ -0.52
PCAT1-202ENST00000561978 UGT1A9O60656 530 aa11.81□□□□□ -0.52
PCAT1-202ENST00000561978 CLASP2O75122 1294 aaKnown RBP11.81□□□□□ -0.52
PCAT1-202ENST00000561978 USP1O94782 785 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms