RNA–Protein interactions for RNA: ENST00000561960.5

NSMCE1-202, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

TSL 3

Gene NSMCE1, Length 609 nt, Biotype retained intron, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-202ENST00000561960 RHOCP08134 193 aa11.96□□□□□ -0.49
NSMCE1-202ENST00000561960 CELA2BP08218 269 aaPredicted RBP11.96□□□□□ -0.49
NSMCE1-202ENST00000561960 PNMA6AP0CW24 399 aaPredicted RBP11.96□□□□□ -0.49
NSMCE1-202ENST00000561960 HNRNPA2B1P22626 353 aaKnown RBP11.96□□□□□ -0.49
NSMCE1-202ENST00000561960 MCCD1P59942 119 aaPredicted RBP11.96□□□□□ -0.49
NSMCE1-202ENST00000561960 RNASE9P60153 205 aaKnown RBP11.96□□□□□ -0.49
NSMCE1-202ENST00000561960 YWHAZP63104 245 aaKnown RBP11.96□□□□□ -0.49
NSMCE1-202ENST00000561960 SULT2A1Q06520 285 aa11.96□□□□□ -0.49
NSMCE1-202ENST00000561960 VAC14Q08AM6 782 aa11.96□□□□□ -0.49
NSMCE1-202ENST00000561960 NFATC3Q12968 1075 aa11.96□□□□□ -0.49
NSMCE1-202ENST00000561960 NNTQ13423 1086 aa11.96□□□□□ -0.49
NSMCE1-202ENST00000561960 FZD2Q14332 565 aa11.96□□□□□ -0.49
NSMCE1-202ENST00000561960 ARHGAP44Q17R89 818 aa11.96□□□□□ -0.49
NSMCE1-202ENST00000561960 ISXQ2M1V0 245 aa11.96□□□□□ -0.49
NSMCE1-202ENST00000561960 C6orf132Q5T0Z8 1188 aa11.96□□□□□ -0.49
NSMCE1-202ENST00000561960 BMFQ96LC9 184 aa11.96□□□□□ -0.49
NSMCE1-202ENST00000561960 CRACR2AQ9BSW2 395 aa11.96□□□□□ -0.49
NSMCE1-202ENST00000561960 SLC4A5Q9BY07 1137 aa11.96□□□□□ -0.49
NSMCE1-202ENST00000561960 SCAND2PQ9GZW5 306 aaPredicted RBP11.96□□□□□ -0.49
NSMCE1-202ENST00000561960 CLMPQ9H6B4 373 aa11.96□□□□□ -0.49
NSMCE1-202ENST00000561960 METTL14Q9HCE5 456 aaKnown RBP11.96□□□□□ -0.49
NSMCE1-202ENST00000561960 PREBQ9HCU5 417 aa11.96□□□□□ -0.49
NSMCE1-202ENST00000561960 UBE2TQ9NPD8 197 aaPredicted RBP11.96□□□□□ -0.49
NSMCE1-202ENST00000561960 DYRK4Q9NR20 520 aa11.96□□□□□ -0.49
NSMCE1-202ENST00000561960 NLGN3Q9NZ94 848 aa11.96□□□□□ -0.49
NSMCE1-202ENST00000561960 SIRPGQ9P1W8 387 aa11.96□□□□□ -0.49
NSMCE1-202ENST00000561960 PNMA8BQ9ULN7 279 aaPredicted RBP11.96□□□□□ -0.49
NSMCE1-202ENST00000561960 DOPEY2Q9Y3R5 2298 aa11.96□□□□□ -0.49
NSMCE1-202ENST00000561960 UNC13CQ8NB66 2214 aa11.95□□□□□ -0.5
NSMCE1-202ENST00000561960 A6NNZ2 444 aa11.95□□□□□ -0.5
NSMCE1-202ENST00000561960 B8ZZF3 427 aa11.95□□□□□ -0.5
NSMCE1-202ENST00000561960 BIN1O00499 593 aa11.95□□□□□ -0.5
NSMCE1-202ENST00000561960 ARHGAP6O43182 974 aa11.95□□□□□ -0.5
NSMCE1-202ENST00000561960 LEFTY1O75610 366 aa11.95□□□□□ -0.5
NSMCE1-202ENST00000561960 ERBB2P04626 1255 aa11.95□□□□□ -0.5
NSMCE1-202ENST00000561960 ALPPL2P10696 532 aa11.95□□□□□ -0.5
NSMCE1-202ENST00000561960 C6P13671 934 aa11.95□□□□□ -0.5
NSMCE1-202ENST00000561960 HGFP14210 728 aa11.95□□□□□ -0.5
NSMCE1-202ENST00000561960 GNA15P30679 374 aa11.95□□□□□ -0.5
NSMCE1-202ENST00000561960 LSSP48449 732 aa11.95□□□□□ -0.5
NSMCE1-202ENST00000561960 CDK17Q00537 523 aa11.95□□□□□ -0.5
NSMCE1-202ENST00000561960 RHDQ02161 417 aa11.95□□□□□ -0.5
NSMCE1-202ENST00000561960 C1QBPQ07021 282 aaKnown RBP11.95□□□□□ -0.5
NSMCE1-202ENST00000561960 PDE1CQ14123 709 aaPredicted RBP11.95□□□□□ -0.5
NSMCE1-202ENST00000561960 TGIF1Q15583 401 aa11.95□□□□□ -0.5
NSMCE1-202ENST00000561960 OTUD1Q5VV17 481 aaPredicted RBP11.95□□□□□ -0.5
NSMCE1-202ENST00000561960 DPY19L3Q6ZPD9 716 aa11.95□□□□□ -0.5
NSMCE1-202ENST00000561960 CREBRFQ8IUR6 639 aa11.95□□□□□ -0.5
NSMCE1-202ENST00000561960 C1orf131Q8NDD1 294 aaKnown RBP11.95□□□□□ -0.5
NSMCE1-202ENST00000561960 SPON2Q9BUD6 331 aa11.95□□□□□ -0.5
NSMCE1-202ENST00000561960 KDM4CQ9H3R0 1056 aa11.95□□□□□ -0.5
NSMCE1-202ENST00000561960 ZDHHC6Q9H6R6 413 aa11.95□□□□□ -0.5
NSMCE1-202ENST00000561960 THSD1Q9NS62 852 aa11.95□□□□□ -0.5
NSMCE1-202ENST00000561960 PIGVQ9NUD9 493 aa11.95□□□□□ -0.5
NSMCE1-202ENST00000561960 SLTMQ9NWH9 1034 aaKnown RBP eCLIP11.95□□□□□ -0.5
NSMCE1-202ENST00000561960 SLC12A6Q9UHW9 1150 aa11.95□□□□□ -0.5
NSMCE1-202ENST00000561960 IPO11Q9UI26 975 aaKnown RBP11.95□□□□□ -0.5
NSMCE1-202ENST00000561960 AJAP1Q9UKB5 411 aaPredicted RBP11.95□□□□□ -0.5
NSMCE1-202ENST00000561960 FCF1Q9Y324 198 aaKnown RBP11.95□□□□□ -0.5
NSMCE1-202ENST00000561960 ENTPD2Q9Y5L3 495 aa11.95□□□□□ -0.5
NSMCE1-202ENST00000561960 IGLON5A6NGN9 336 aa11.94□□□□□ -0.5
NSMCE1-202ENST00000561960 M0QYT0 321 aa11.94□□□□□ -0.5
NSMCE1-202ENST00000561960 GCATO75600 419 aa11.94□□□□□ -0.5
NSMCE1-202ENST00000561960 TNFSF15O95150 251 aa11.94□□□□□ -0.5
NSMCE1-202ENST00000561960 JUNDP17535 347 aa11.94□□□□□ -0.5
NSMCE1-202ENST00000561960 RBMS1P29558 406 aaKnown RBP11.94□□□□□ -0.5
NSMCE1-202ENST00000561960 CCR1P32246 355 aa11.94□□□□□ -0.5
NSMCE1-202ENST00000561960 ACADSBP45954 432 aa11.94□□□□□ -0.5
NSMCE1-202ENST00000561960 PLK1P53350 603 aa11.94□□□□□ -0.5
NSMCE1-202ENST00000561960 KCNC4Q03721 635 aa11.94□□□□□ -0.5
NSMCE1-202ENST00000561960 OVGP1Q12889 678 aa11.94□□□□□ -0.5
NSMCE1-202ENST00000561960 SLC12A1Q13621 1099 aa11.94□□□□□ -0.5
NSMCE1-202ENST00000561960 STILQ15468 1287 aa11.94□□□□□ -0.5
NSMCE1-202ENST00000561960 C2CD6Q53TS8 623 aa11.94□□□□□ -0.5
NSMCE1-202ENST00000561960 C22orf39Q6P5X5 142 aa11.94□□□□□ -0.5
NSMCE1-202ENST00000561960 ERN2Q76MJ5 926 aaKnown RBP11.94□□□□□ -0.5
NSMCE1-202ENST00000561960 B3GNT8Q7Z7M8 397 aa11.94□□□□□ -0.5
NSMCE1-202ENST00000561960 JAMLQ86YT9 394 aa11.94□□□□□ -0.5
NSMCE1-202ENST00000561960 RYBPQ8N488 228 aaPredicted RBP11.94□□□□□ -0.5
NSMCE1-202ENST00000561960 WDTC1Q8N5D0 677 aa11.94□□□□□ -0.5
NSMCE1-202ENST00000561960 EXD3Q8N9H8 876 aa11.94□□□□□ -0.5
NSMCE1-202ENST00000561960 LSM14AQ8ND56 463 aaKnown RBP11.94□□□□□ -0.5
NSMCE1-202ENST00000561960 EHBP1Q8NDI1 1231 aa11.94□□□□□ -0.5
NSMCE1-202ENST00000561960 ZNF606Q8WXB4 792 aa11.94□□□□□ -0.5
NSMCE1-202ENST00000561960 SMARCE1Q969G3 411 aa11.94□□□□□ -0.5
NSMCE1-202ENST00000561960 PRR11Q96HE9 360 aaPredicted RBP11.94□□□□□ -0.5
NSMCE1-202ENST00000561960 IRX2Q9BZI1 471 aaPredicted RBP11.94□□□□□ -0.5
NSMCE1-202ENST00000561960 FOXP3Q9BZS1 431 aa11.94□□□□□ -0.5
NSMCE1-202ENST00000561960 TM6SF2Q9BZW4 377 aa11.94□□□□□ -0.5
NSMCE1-202ENST00000561960 THAP9Q9H5L6 903 aa11.94□□□□□ -0.5
NSMCE1-202ENST00000561960 IL36AQ9UHA7 158 aa11.94□□□□□ -0.5
NSMCE1-202ENST00000561960 A0A1W2PQ27 194 aa11.93□□□□□ -0.5
NSMCE1-202ENST00000561960 A0A1W2PQ64 194 aa11.93□□□□□ -0.5
NSMCE1-202ENST00000561960 BECN2A8MW95 431 aa11.93□□□□□ -0.5
NSMCE1-202ENST00000561960 SART1O43290 800 aaKnown RBP11.93□□□□□ -0.5
NSMCE1-202ENST00000561960 AQP9O43315 295 aa11.93□□□□□ -0.5
NSMCE1-202ENST00000561960 SRGAP2O75044 1071 aa11.93□□□□□ -0.5
NSMCE1-202ENST00000561960 ITIH2P19823 946 aa11.93□□□□□ -0.5
NSMCE1-202ENST00000561960 ABL2P42684 1182 aa11.93□□□□□ -0.5
NSMCE1-202ENST00000561960 RPL34P49207 117 aaKnown RBP11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms