RNA–Protein interactions for RNA: ENST00000560365.5

IRF9-209, Transcript of interferon regulatory factor 9, humanhuman

TSL 2

Gene IRF9, Length 623 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF9-209ENST00000560365 GLI1P08151 1106 aa11.87□□□□□ -0.51
IRF9-209ENST00000560365 JUNDP17535 347 aa11.87□□□□□ -0.51
IRF9-209ENST00000560365 RPL34P49207 117 aaKnown RBP11.87□□□□□ -0.51
IRF9-209ENST00000560365 CLCN6P51797 869 aa11.87□□□□□ -0.51
IRF9-209ENST00000560365 INHBCP55103 352 aa11.87□□□□□ -0.51
IRF9-209ENST00000560365 NME3Q13232 169 aa11.87□□□□□ -0.51
IRF9-209ENST00000560365 AUHQ13825 339 aaKnown RBP11.87□□□□□ -0.51
IRF9-209ENST00000560365 PDE1CQ14123 709 aaPredicted RBP11.87□□□□□ -0.51
IRF9-209ENST00000560365 SPIDRQ14159 915 aa11.87□□□□□ -0.51
IRF9-209ENST00000560365 PTK2BQ14289 1009 aa11.87□□□□□ -0.51
IRF9-209ENST00000560365 MEA1Q16626 185 aa11.87□□□□□ -0.51
IRF9-209ENST00000560365 EFHC1Q5JVL4 640 aa11.87□□□□□ -0.51
IRF9-209ENST00000560365 ZNF658Q5TYW1 1059 aaPredicted RBP11.87□□□□□ -0.51
IRF9-209ENST00000560365 SEL1L3Q68CR1 1132 aa11.87□□□□□ -0.51
IRF9-209ENST00000560365 ANKRD40Q6AI12 368 aa11.87□□□□□ -0.51
IRF9-209ENST00000560365 GUSBP11Q6P575 273 aa11.87□□□□□ -0.51
IRF9-209ENST00000560365 USP53Q70EK8 1073 aa11.87□□□□□ -0.51
IRF9-209ENST00000560365 OR2A12Q8NGT7 310 aa11.87□□□□□ -0.51
IRF9-209ENST00000560365 LMX1AQ8TE12 382 aa11.87□□□□□ -0.51
IRF9-209ENST00000560365 KAT5Q92993 513 aa11.87□□□□□ -0.51
IRF9-209ENST00000560365 SNX21Q969T3 373 aa11.87□□□□□ -0.51
IRF9-209ENST00000560365 SLC4A5Q9BY07 1137 aa11.87□□□□□ -0.51
IRF9-209ENST00000560365 HDAC8Q9BY41 377 aa11.87□□□□□ -0.51
IRF9-209ENST00000560365 SLC17A9Q9BYT1 436 aa11.87□□□□□ -0.51
IRF9-209ENST00000560365 SCAND2PQ9GZW5 306 aaPredicted RBP11.87□□□□□ -0.51
IRF9-209ENST00000560365 SIK2Q9H0K1 926 aa11.87□□□□□ -0.51
IRF9-209ENST00000560365 SPASTQ9UBP0 616 aa11.87□□□□□ -0.51
IRF9-209ENST00000560365 ATP6V1DQ9Y5K8 247 aa11.87□□□□□ -0.51
IRF9-209ENST00000560365 KNL1Q8NG31 2342 aa11.87□□□□□ -0.51
IRF9-209ENST00000560365 SPTY2D1-AS1A0A0U1RR47 76 aa11.86□□□□□ -0.51
IRF9-209ENST00000560365 A0A1W2PQ27 194 aa11.86□□□□□ -0.51
IRF9-209ENST00000560365 A0A1W2PQ64 194 aa11.86□□□□□ -0.51
IRF9-209ENST00000560365 NEMP1O14524 444 aa11.86□□□□□ -0.51
IRF9-209ENST00000560365 TPP1O14773 563 aa11.86□□□□□ -0.51
IRF9-209ENST00000560365 PSMA7O14818 248 aa11.86□□□□□ -0.51
IRF9-209ENST00000560365 PMM2O15305 246 aa11.86□□□□□ -0.51
IRF9-209ENST00000560365 THAP12O43422 761 aa11.86□□□□□ -0.51
IRF9-209ENST00000560365 HSF2BPO75031 334 aa11.86□□□□□ -0.51
IRF9-209ENST00000560365 PAK4O96013 591 aaPredicted RBP11.86□□□□□ -0.51
IRF9-209ENST00000560365 CTSLP07711 333 aa11.86□□□□□ -0.51
IRF9-209ENST00000560365 ITGA2BP08514 1039 aa11.86□□□□□ -0.51
IRF9-209ENST00000560365 SFTPCP11686 197 aa11.86□□□□□ -0.51
IRF9-209ENST00000560365 THOP1P52888 689 aa11.86□□□□□ -0.51
IRF9-209ENST00000560365 SNX16P57768 344 aa11.86□□□□□ -0.51
IRF9-209ENST00000560365 PKP1Q13835 747 aa11.86□□□□□ -0.51
IRF9-209ENST00000560365 FZD2Q14332 565 aa11.86□□□□□ -0.51
IRF9-209ENST00000560365 DEFB133Q30KQ1 61 aa11.86□□□□□ -0.51
IRF9-209ENST00000560365 TMEM259Q4ZIN3 620 aa11.86□□□□□ -0.51
IRF9-209ENST00000560365 ARSIQ5FYB1 569 aa11.86□□□□□ -0.51
IRF9-209ENST00000560365 ESRP1Q6NXG1 681 aaKnown RBP11.86□□□□□ -0.51
IRF9-209ENST00000560365 DENND1BQ6P3S1 775 aa11.86□□□□□ -0.51
IRF9-209ENST00000560365 CRTC1Q6UUV9 634 aa11.86□□□□□ -0.51
IRF9-209ENST00000560365 LRRC31Q6UY01 552 aa11.86□□□□□ -0.51
IRF9-209ENST00000560365 ATG14Q6ZNE5 492 aa11.86□□□□□ -0.51
IRF9-209ENST00000560365 TMEM110Q86TL2 294 aa11.86□□□□□ -0.51
IRF9-209ENST00000560365 DEFB106AQ8N104 65 aa11.86□□□□□ -0.51
IRF9-209ENST00000560365 ALG14Q96F25 216 aa11.86□□□□□ -0.51
IRF9-209ENST00000560365 GSDMAQ96QA5 445 aa11.86□□□□□ -0.51
IRF9-209ENST00000560365 APOBEC3BQ9UH17 382 aaKnown RBP11.86□□□□□ -0.51
IRF9-209ENST00000560365 IL17BQ9UHF5 180 aa11.86□□□□□ -0.51
IRF9-209ENST00000560365 HOOK1Q9UJC3 728 aaKnown RBP11.86□□□□□ -0.51
IRF9-209ENST00000560365 DOLKQ9UPQ8 538 aa11.86□□□□□ -0.51
IRF9-209ENST00000560365 ZFR2Q9UPR6 939 aaKnown RBP11.86□□□□□ -0.51
IRF9-209ENST00000560365 TBC1D30Q9Y2I9 924 aa11.86□□□□□ -0.51
IRF9-209ENST00000560365 SSUH2Q9Y2M2 353 aa11.86□□□□□ -0.51
IRF9-209ENST00000560365 PAXBP1Q9Y5B6 917 aa11.86□□□□□ -0.51
IRF9-209ENST00000560365 PTPRQQ9UMZ3 2332 aa11.86□□□□□ -0.51
IRF9-209ENST00000560365 LY6G6EA0A0G2JKS1 128 aa11.85□□□□□ -0.51
IRF9-209ENST00000560365 POM121BA6NF01 834 aa11.85□□□□□ -0.51
IRF9-209ENST00000560365 CDRT15L2A8MXV6 281 aa11.85□□□□□ -0.51
IRF9-209ENST00000560365 TMX2-CTNND1H3BSU7 103 aa11.85□□□□□ -0.51
IRF9-209ENST00000560365 M0QYT0 321 aa11.85□□□□□ -0.51
IRF9-209ENST00000560365 LEFTY1O75610 366 aa11.85□□□□□ -0.51
IRF9-209ENST00000560365 ADCY5O95622 1261 aa11.85□□□□□ -0.51
IRF9-209ENST00000560365 ANXA6P08133 673 aa11.85□□□□□ -0.51
IRF9-209ENST00000560365 ADRB3P13945 408 aa11.85□□□□□ -0.51
IRF9-209ENST00000560365 RRM1P23921 792 aa11.85□□□□□ -0.51
IRF9-209ENST00000560365 GNA15P30679 374 aa11.85□□□□□ -0.51
IRF9-209ENST00000560365 DNA2P51530 1060 aa11.85□□□□□ -0.51
IRF9-209ENST00000560365 PITX1P78337 314 aaPredicted RBP11.85□□□□□ -0.51
IRF9-209ENST00000560365 SKOR1P84550 965 aa11.85□□□□□ -0.51
IRF9-209ENST00000560365 CLN3Q13286 438 aa11.85□□□□□ -0.51
IRF9-209ENST00000560365 EIF3IQ13347 325 aaKnown RBP11.85□□□□□ -0.51
IRF9-209ENST00000560365 PDCLQ13371 301 aa11.85□□□□□ -0.51
IRF9-209ENST00000560365 PNOCQ13519 176 aa11.85□□□□□ -0.51
IRF9-209ENST00000560365 ARL13BQ3SXY8 428 aa11.85□□□□□ -0.51
IRF9-209ENST00000560365 COBLL1Q53SF7 1204 aa11.85□□□□□ -0.51
IRF9-209ENST00000560365 RETSATQ6NUM9 610 aa11.85□□□□□ -0.51
IRF9-209ENST00000560365 C22orf39Q6P5X5 142 aa11.85□□□□□ -0.51
IRF9-209ENST00000560365 CLEC14AQ86T13 490 aa11.85□□□□□ -0.51
IRF9-209ENST00000560365 SETD3Q86TU7 594 aaPredicted RBP11.85□□□□□ -0.51
IRF9-209ENST00000560365 JAMLQ86YT9 394 aa11.85□□□□□ -0.51
IRF9-209ENST00000560365 DCAF4L2Q8NA75 395 aa11.85□□□□□ -0.51
IRF9-209ENST00000560365 ZSCAN1Q8NBB4 408 aa11.85□□□□□ -0.51
IRF9-209ENST00000560365 OR52K2Q8NGK3 314 aa11.85□□□□□ -0.51
IRF9-209ENST00000560365 SCG3Q8WXD2 468 aaKnown RBP11.85□□□□□ -0.51
IRF9-209ENST00000560365 BMFQ96LC9 184 aa11.85□□□□□ -0.51
IRF9-209ENST00000560365 CEP63Q96MT8 703 aa11.85□□□□□ -0.51
IRF9-209ENST00000560365 SLC13A1Q9BZW2 595 aa11.85□□□□□ -0.51
IRF9-209ENST00000560365 TRIM4Q9C037 500 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms