RNA–Protein interactions for RNA: ENST00000559989.1

CSPG4P12-202, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 12, humanhuman

TSL 1 (best) BASIC

Gene CSPG4P12, Length 7,790 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P12-202ENST00000559989 PCDHGA10Q9Y5H3 936 aa14.02□□□□□ -0.17
CSPG4P12-202ENST00000559989 TNPO3Q9Y5L0 923 aaKnown RBP14.02□□□□□ -0.17
CSPG4P12-202ENST00000559989 TOP3BO95985 862 aaKnown RBP14.02□□□□□ -0.17
CSPG4P12-202ENST00000559989 RLN2P04090 185 aa14.02□□□□□ -0.17
CSPG4P12-202ENST00000559989 CYP1A1P04798 512 aaPredicted RBP14.02□□□□□ -0.17
CSPG4P12-202ENST00000559989 DLG4P78352 724 aa14.02□□□□□ -0.17
CSPG4P12-202ENST00000559989 ABRQ12979 859 aa14.02□□□□□ -0.17
CSPG4P12-202ENST00000559989 C11orf24Q96F05 449 aaPredicted RBP14.02□□□□□ -0.17
CSPG4P12-202ENST00000559989 XKR8Q9H6D3 395 aa14.02□□□□□ -0.17
CSPG4P12-202ENST00000559989 METTL8Q9H825 291 aaKnown RBP14.02□□□□□ -0.17
CSPG4P12-202ENST00000559989 MOV10Q9HCE1 1003 aaKnown RBP14.02□□□□□ -0.17
CSPG4P12-202ENST00000559989 TLR8Q9NR97 1041 aaKnown RBP14.02□□□□□ -0.17
CSPG4P12-202ENST00000559989 OGNP20774 298 aaKnown RBP14.02□□□□□ -0.17
CSPG4P12-202ENST00000559989 BCAT1P54687 386 aa14.02□□□□□ -0.17
CSPG4P12-202ENST00000559989 ADAM17P78536 824 aa14.02□□□□□ -0.17
CSPG4P12-202ENST00000559989 TOB2Q14106 344 aaPredicted RBP14.02□□□□□ -0.17
CSPG4P12-202ENST00000559989 PDK3Q15120 406 aa14.02□□□□□ -0.17
CSPG4P12-202ENST00000559989 CDKL4Q5MAI5 379 aa14.02□□□□□ -0.17
CSPG4P12-202ENST00000559989 PIH1D2Q8WWB5 315 aa14.02□□□□□ -0.17
CSPG4P12-202ENST00000559989 APOPT1Q96IL0 206 aa14.02□□□□□ -0.17
CSPG4P12-202ENST00000559989 SPATA9Q9BWV2 254 aa14.02□□□□□ -0.17
CSPG4P12-202ENST00000559989 HPF1Q9NWY4 346 aa14.02□□□□□ -0.17
CSPG4P12-202ENST00000559989 HOXB6P17509 224 aaKnown RBP14.01□□□□□ -0.17
CSPG4P12-202ENST00000559989 QRICH1Q2TAL8 776 aa14.01□□□□□ -0.17
CSPG4P12-202ENST00000559989 ARMC10Q8N2F6 343 aa14.01□□□□□ -0.17
CSPG4P12-202ENST00000559989 OR10H5Q8NGA6 315 aa14.01□□□□□ -0.17
CSPG4P12-202ENST00000559989 GTF3C2Q8WUA4 911 aaPredicted RBP14.01□□□□□ -0.17
CSPG4P12-202ENST00000559989 ATL1Q8WXF7 558 aa14.01□□□□□ -0.17
CSPG4P12-202ENST00000559989 KLHL5Q96PQ7 755 aa14.01□□□□□ -0.17
CSPG4P12-202ENST00000559989 VPS45Q9NRW7 570 aa14.01□□□□□ -0.17
CSPG4P12-202ENST00000559989 GPR107Q5VW38 600 aa14.01□□□□□ -0.17
CSPG4P12-202ENST00000559989 JAZF1Q86VZ6 243 aa14.01□□□□□ -0.17
CSPG4P12-202ENST00000559989 KAT5Q92993 513 aa14.01□□□□□ -0.17
CSPG4P12-202ENST00000559989 RERGQ96A58 199 aaPredicted RBP14.01□□□□□ -0.17
CSPG4P12-202ENST00000559989 STRBPQ96SI9 672 aaKnown RBP14.01□□□□□ -0.17
CSPG4P12-202ENST00000559989 PIH1D3Q9NQM4 214 aaKnown RBP14.01□□□□□ -0.17
CSPG4P12-202ENST00000559989 PNPLA3Q9NST1 481 aa14.01□□□□□ -0.17
CSPG4P12-202ENST00000559989 PP2D1A8MPX8 630 aa14.01□□□□□ -0.17
CSPG4P12-202ENST00000559989 FAM153BP0C7A2 387 aa14.01□□□□□ -0.17
CSPG4P12-202ENST00000559989 NR2F6P10588 404 aa14.01□□□□□ -0.17
CSPG4P12-202ENST00000559989 ROR2Q01974 943 aaKnown RBP14.01□□□□□ -0.17
CSPG4P12-202ENST00000559989 ILF3Q12906 894 aaKnown RBP eCLIP14.01□□□□□ -0.17
CSPG4P12-202ENST00000559989 SQLEQ14534 574 aa14.01□□□□□ -0.17
CSPG4P12-202ENST00000559989 RBM44Q6ZP01 1051 aaKnown RBP14.01□□□□□ -0.17
CSPG4P12-202ENST00000559989 C10orf107Q8IVU9 208 aa14.01□□□□□ -0.17
CSPG4P12-202ENST00000559989 STK40Q8N2I9 435 aa14.01□□□□□ -0.17
CSPG4P12-202ENST00000559989 ACSF2Q96CM8 615 aaPredicted RBP14.01□□□□□ -0.17
CSPG4P12-202ENST00000559989 KCNS3Q9BQ31 491 aa14.01□□□□□ -0.17
CSPG4P12-202ENST00000559989 FAM126AQ9BYI3 521 aaPredicted RBP14.01□□□□□ -0.17
CSPG4P12-202ENST00000559989 CDC42EP4Q9H3Q1 356 aaKnown RBP14.01□□□□□ -0.17
CSPG4P12-202ENST00000559989 CLK4Q9HAZ1 481 aaKnown RBP14.01□□□□□ -0.17
CSPG4P12-202ENST00000559989 CYP3A43Q9HB55 503 aa14.01□□□□□ -0.17
CSPG4P12-202ENST00000559989 ZNF639Q9UID6 485 aa14.01□□□□□ -0.17
CSPG4P12-202ENST00000559989 LRIG2O94898 1065 aa14.01□□□□□ -0.17
CSPG4P12-202ENST00000559989 PGAM1P18669 254 aa14.01□□□□□ -0.17
CSPG4P12-202ENST00000559989 MRPS22P82650 360 aaKnown RBP14.01□□□□□ -0.17
CSPG4P12-202ENST00000559989 PITPNAQ00169 270 aa14.01□□□□□ -0.17
CSPG4P12-202ENST00000559989 INSCQ1MX18 579 aa14.01□□□□□ -0.17
CSPG4P12-202ENST00000559989 RBM20Q5T481 1227 aaKnown RBP14.01□□□□□ -0.17
CSPG4P12-202ENST00000559989 TSEN15Q8WW01 171 aaKnown RBP14.01□□□□□ -0.17
CSPG4P12-202ENST00000559989 PRELID1Q9Y255 219 aa14.01□□□□□ -0.17
CSPG4P12-202ENST00000559989 TNFSF13BQ9Y275 285 aa14.01□□□□□ -0.17
CSPG4P12-202ENST00000559989 LAMC1P11047 1609 aa14.01□□□□□ -0.17
CSPG4P12-202ENST00000559989 ATXN2Q99700 1313 aaKnown RBP14.01□□□□□ -0.17
CSPG4P12-202ENST00000559989 TTC34A8MYJ7 566 aa14.01□□□□□ -0.17
CSPG4P12-202ENST00000559989 H3BNH8 94 aa14.01□□□□□ -0.17
CSPG4P12-202ENST00000559989 PSMG1O95456 288 aa14.01□□□□□ -0.17
CSPG4P12-202ENST00000559989 NR2F1P10589 423 aa14.01□□□□□ -0.17
CSPG4P12-202ENST00000559989 CHST15Q7LFX5 561 aaPredicted RBP14.01□□□□□ -0.17
CSPG4P12-202ENST00000559989 ZNF512BQ96KM6 892 aaPredicted RBP14.01□□□□□ -0.17
CSPG4P12-202ENST00000559989 LMAN2LQ9H0V9 348 aa14.01□□□□□ -0.17
CSPG4P12-202ENST00000559989 PLEKHG2Q9H7P9 1386 aa14.01□□□□□ -0.17
CSPG4P12-202ENST00000559989 A0A0A6YYK5 440 aaPredicted RBP14.01□□□□□ -0.17
CSPG4P12-202ENST00000559989 MID1O15344 667 aa14.01□□□□□ -0.17
CSPG4P12-202ENST00000559989 AKAP8O43823 692 aaKnown RBP14.01□□□□□ -0.17
CSPG4P12-202ENST00000559989 CYB5AP00167 134 aa14.01□□□□□ -0.17
CSPG4P12-202ENST00000559989 TMEM62Q0P6H9 643 aa14.01□□□□□ -0.17
CSPG4P12-202ENST00000559989 SETMARQ53H47 684 aaPredicted RBP14.01□□□□□ -0.17
CSPG4P12-202ENST00000559989 KYAT3Q6YP21 454 aaKnown RBP14.01□□□□□ -0.17
CSPG4P12-202ENST00000559989 FRMD7Q6ZUT3 714 aa14.01□□□□□ -0.17
CSPG4P12-202ENST00000559989 SLC47A1Q96FL8 570 aa14.01□□□□□ -0.17
CSPG4P12-202ENST00000559989 ZNF471Q9BX82 626 aaPredicted RBP14.01□□□□□ -0.17
CSPG4P12-202ENST00000559989 RGS8P57771 180 aaPredicted RBP14□□□□□ -0.17
CSPG4P12-202ENST00000559989 POLR2LP62875 67 aaKnown RBP14□□□□□ -0.17
CSPG4P12-202ENST00000559989 PYDC1Q8WXC3 89 aa14□□□□□ -0.17
CSPG4P12-202ENST00000559989 COL26A1Q96A83 441 aa14□□□□□ -0.17
CSPG4P12-202ENST00000559989 CCSER2Q9H7U1 834 aa14□□□□□ -0.17
CSPG4P12-202ENST00000559989 MTF2Q9Y483 593 aaPredicted RBP14□□□□□ -0.17
CSPG4P12-202ENST00000559989 CLASP1Q7Z460 1538 aa14□□□□□ -0.17
CSPG4P12-202ENST00000559989 ABCC2Q92887 1545 aa14□□□□□ -0.17
CSPG4P12-202ENST00000559989 CASZ1Q86V15 1759 aa14□□□□□ -0.17
CSPG4P12-202ENST00000559989 OPLAHO14841 1288 aa14□□□□□ -0.17
CSPG4P12-202ENST00000559989 SCNN1BP51168 640 aa14□□□□□ -0.17
CSPG4P12-202ENST00000559989 DEFA5Q01523 94 aa14□□□□□ -0.17
CSPG4P12-202ENST00000559989 BOP1Q14137 746 aaKnown RBP14□□□□□ -0.17
CSPG4P12-202ENST00000559989 LACTB2Q53H82 288 aaPredicted RBP14□□□□□ -0.17
CSPG4P12-202ENST00000559989 DNAJC14Q6Y2X3 702 aaPredicted RBP14□□□□□ -0.17
CSPG4P12-202ENST00000559989 CMTR2Q8IYT2 770 aaKnown RBP14□□□□□ -0.17
CSPG4P12-202ENST00000559989 SFRP1Q8N474 314 aa14□□□□□ -0.17
CSPG4P12-202ENST00000559989 TMIEQ8NEW7 156 aa14□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms