RNA–Protein interactions for RNA: ENST00000559754.1

SPG11-218, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 5

Gene SPG11, Length 411 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-218ENST00000559754 FAM90A16PA6NEW6 464 aa4.04□□□□□ -1.76
SPG11-218ENST00000559754 SAC3D1A6NKF1 404 aa4.04□□□□□ -1.76
SPG11-218ENST00000559754 FAM90A9PA6NNJ1 464 aa4.04□□□□□ -1.76
SPG11-218ENST00000559754 FAM90A5PA8MXJ8 464 aa4.04□□□□□ -1.76
SPG11-218ENST00000559754 EIF3FO00303 357 aaPredicted RBP4.04□□□□□ -1.76
SPG11-218ENST00000559754 ITGA2BP08514 1039 aa4.04□□□□□ -1.76
SPG11-218ENST00000559754 ACAA1P09110 424 aaPredicted RBP4.04□□□□□ -1.76
SPG11-218ENST00000559754 FAM90A15PP0C7V4 464 aa4.04□□□□□ -1.76
SPG11-218ENST00000559754 FAM90A14PP0C7W9 464 aa4.04□□□□□ -1.76
SPG11-218ENST00000559754 VEGFAP15692 232 aaPredicted RBP4.04□□□□□ -1.76
SPG11-218ENST00000559754 KLRC2P26717 231 aa4.04□□□□□ -1.76
SPG11-218ENST00000559754 HOXA11P31270 313 aaPredicted RBP4.04□□□□□ -1.76
SPG11-218ENST00000559754 CYP2J2P51589 502 aa4.04□□□□□ -1.76
SPG11-218ENST00000559754 GALNT1Q10472 559 aaPredicted RBP4.04□□□□□ -1.76
SPG11-218ENST00000559754 PRKG2Q13237 762 aa4.04□□□□□ -1.76
SPG11-218ENST00000559754 KEAP1Q14145 624 aa4.04□□□□□ -1.76
SPG11-218ENST00000559754 TOMM20Q15388 145 aa4.04□□□□□ -1.76
SPG11-218ENST00000559754 PFKFB4Q16877 469 aa4.04□□□□□ -1.76
SPG11-218ENST00000559754 CCDC96Q2M329 555 aa4.04□□□□□ -1.76
SPG11-218ENST00000559754 BTBD16Q32M84 506 aa4.04□□□□□ -1.76
SPG11-218ENST00000559754 PLK5Q496M5 336 aa4.04□□□□□ -1.76
SPG11-218ENST00000559754 DNTTIP2Q5QJE6 756 aaKnown RBP4.04□□□□□ -1.76
SPG11-218ENST00000559754 DCAF12L2Q5VW00 463 aa4.04□□□□□ -1.76
SPG11-218ENST00000559754 FAM180BQ6P0A1 224 aa4.04□□□□□ -1.76
SPG11-218ENST00000559754 NFRKBQ6P4R8 1299 aa4.04□□□□□ -1.76
SPG11-218ENST00000559754 C4orf50Q6ZRC1 276 aa4.04□□□□□ -1.76
SPG11-218ENST00000559754 BRINP3Q76B58 766 aa4.04□□□□□ -1.76
SPG11-218ENST00000559754 RAB11FIP2Q7L804 512 aa4.04□□□□□ -1.76
SPG11-218ENST00000559754 KRT77Q7Z794 578 aa4.04□□□□□ -1.76
SPG11-218ENST00000559754 GALNT15Q8N3T1 639 aa4.04□□□□□ -1.76
SPG11-218ENST00000559754 RBMXL3Q8N7X1 1067 aaKnown RBP4.04□□□□□ -1.76
SPG11-218ENST00000559754 PRR26Q8N8Z3 221 aa4.04□□□□□ -1.76
SPG11-218ENST00000559754 STYXQ8WUJ0 223 aa4.04□□□□□ -1.76
SPG11-218ENST00000559754 EID2BQ96D98 161 aa4.04□□□□□ -1.76
SPG11-218ENST00000559754 ZBTB10Q96DT7 871 aa4.04□□□□□ -1.76
SPG11-218ENST00000559754 WDR77Q9BQA1 342 aaPredicted RBP4.04□□□□□ -1.76
SPG11-218ENST00000559754 RTKNQ9BST9 563 aa4.04□□□□□ -1.76
SPG11-218ENST00000559754 TBC1D22BQ9NU19 505 aa4.04□□□□□ -1.76
SPG11-218ENST00000559754 HERC5Q9UII4 1024 aaKnown RBP4.04□□□□□ -1.76
SPG11-218ENST00000559754 SLC25A13Q9UJS0 675 aa4.04□□□□□ -1.76
SPG11-218ENST00000559754 SLC13A4Q9UKG4 626 aa4.04□□□□□ -1.76
SPG11-218ENST00000559754 AQP12BA6NM10 295 aa4.03□□□□□ -1.76
SPG11-218ENST00000559754 DDX58O95786 925 aaKnown RBP4.03□□□□□ -1.76
SPG11-218ENST00000559754 CD4P01730 458 aa4.03□□□□□ -1.76
SPG11-218ENST00000559754 IFIT1P09914 478 aaKnown RBP4.03□□□□□ -1.76
SPG11-218ENST00000559754 PLA2G2AP14555 144 aa4.03□□□□□ -1.76
SPG11-218ENST00000559754 CHRNB2P17787 502 aa4.03□□□□□ -1.76
SPG11-218ENST00000559754 ELF1P32519 619 aa4.03□□□□□ -1.76
SPG11-218ENST00000559754 TNFSF8P32971 234 aa4.03□□□□□ -1.76
SPG11-218ENST00000559754 NUCB1Q02818 461 aa4.03□□□□□ -1.76
SPG11-218ENST00000559754 CRYZQ08257 329 aaKnown RBP4.03□□□□□ -1.76
SPG11-218ENST00000559754 TRAF2Q12933 501 aa4.03□□□□□ -1.76
SPG11-218ENST00000559754 GPS2Q13227 327 aa4.03□□□□□ -1.76
SPG11-218ENST00000559754 NFATC4Q14934 902 aa4.03□□□□□ -1.76
SPG11-218ENST00000559754 POSTNQ15063 836 aa4.03□□□□□ -1.76
SPG11-218ENST00000559754 C5orf22Q49AR2 442 aa4.03□□□□□ -1.76
SPG11-218ENST00000559754 FAM133BQ5BKY9 247 aaKnown RBP4.03□□□□□ -1.76
SPG11-218ENST00000559754 SPATA1Q5VX52 437 aa4.03□□□□□ -1.76
SPG11-218ENST00000559754 NADSYN1Q6IA69 706 aa4.03□□□□□ -1.76
SPG11-218ENST00000559754 SLC30A9Q6PML9 568 aa4.03□□□□□ -1.76
SPG11-218ENST00000559754 C16orf54Q6UWD8 224 aa4.03□□□□□ -1.76
SPG11-218ENST00000559754 DLK2Q6UY11 383 aa4.03□□□□□ -1.76
SPG11-218ENST00000559754 TBC1D1Q86TI0 1168 aaPredicted RBP4.03□□□□□ -1.76
SPG11-218ENST00000559754 KDM1BQ8NB78 822 aa4.03□□□□□ -1.76
SPG11-218ENST00000559754 ENGASEQ8NFI3 743 aa4.03□□□□□ -1.76
SPG11-218ENST00000559754 FAM110DQ8TAY7 271 aaPredicted RBP4.03□□□□□ -1.76
SPG11-218ENST00000559754 CPT1BQ92523 772 aa4.03□□□□□ -1.76
SPG11-218ENST00000559754 ZNF333Q96JL9 665 aa4.03□□□□□ -1.76
SPG11-218ENST00000559754 PIGSQ96S52 555 aa4.03□□□□□ -1.76
SPG11-218ENST00000559754 KATNAL1Q9BW62 490 aa4.03□□□□□ -1.76
SPG11-218ENST00000559754 TM6SF1Q9BZW5 370 aa4.03□□□□□ -1.76
SPG11-218ENST00000559754 BRD8Q9H0E9 1235 aa4.03□□□□□ -1.76
SPG11-218ENST00000559754 PDE11AQ9HCR9 933 aa4.03□□□□□ -1.76
SPG11-218ENST00000559754 WASH6PQ9NQA3 447 aa4.03□□□□□ -1.76
SPG11-218ENST00000559754 SMC4Q9NTJ3 1288 aa4.03□□□□□ -1.76
SPG11-218ENST00000559754 BLOC1S4Q9NUP1 217 aa4.03□□□□□ -1.76
SPG11-218ENST00000559754 TMLHEQ9NVH6 421 aa4.03□□□□□ -1.76
SPG11-218ENST00000559754 DACT1Q9NYF0 836 aa4.03□□□□□ -1.76
SPG11-218ENST00000559754 GRHPRQ9UBQ7 328 aa4.03□□□□□ -1.76
SPG11-218ENST00000559754 BAG5Q9UL15 447 aa4.03□□□□□ -1.76
SPG11-218ENST00000559754 TTLL3Q9Y4R7 772 aa4.03□□□□□ -1.76
SPG11-218ENST00000559754 PCDHA10Q9Y5I2 948 aa4.03□□□□□ -1.76
SPG11-218ENST00000559754 PTGDR2Q9Y5Y4 395 aa4.03□□□□□ -1.76
SPG11-218ENST00000559754 EVPLQ92817 2033 aa4.02□□□□□ -1.77
SPG11-218ENST00000559754 C11orf97A0A1B0GVM6 126 aaPredicted RBP4.02□□□□□ -1.77
SPG11-218ENST00000559754 A6NCN8 305 aa4.02□□□□□ -1.77
SPG11-218ENST00000559754 AGAP5A6NIR3 686 aa4.02□□□□□ -1.77
SPG11-218ENST00000559754 LGALS16A8MUM7 142 aa4.02□□□□□ -1.77
SPG11-218ENST00000559754 BECN2A8MW95 431 aa4.02□□□□□ -1.77
SPG11-218ENST00000559754 INAFM1C9JVW0 142 aa4.02□□□□□ -1.77
SPG11-218ENST00000559754 MS4A18H0YCH9 400 aa4.02□□□□□ -1.77
SPG11-218ENST00000559754 SYT5O00445 386 aa4.02□□□□□ -1.77
SPG11-218ENST00000559754 VWA5AO00534 786 aa4.02□□□□□ -1.77
SPG11-218ENST00000559754 RGS14O43566 566 aa4.02□□□□□ -1.77
SPG11-218ENST00000559754 LCATP04180 440 aa4.02□□□□□ -1.77
SPG11-218ENST00000559754 PRSS2P07478 247 aa4.02□□□□□ -1.77
SPG11-218ENST00000559754 MYZAPP0CAP1 466 aa4.02□□□□□ -1.77
SPG11-218ENST00000559754 PKMP14618 531 aaKnown RBP4.02□□□□□ -1.77
SPG11-218ENST00000559754 MCCP23508 829 aa4.02□□□□□ -1.77
SPG11-218ENST00000559754 GSTM2P28161 218 aa4.02□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms