RNA–Protein interactions for RNA: ENST00000559309.5

SNRPA1-207, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 5

Gene SNRPA1, Length 924 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-207ENST00000559309 SMARCAL1Q9NZC9 954 aa15.09■□□□□ 0.01
SNRPA1-207ENST00000559309 LHX3Q9UBR4 397 aa15.09■□□□□ 0.01
SNRPA1-207ENST00000559309 DNPEPQ9ULA0 475 aa15.09■□□□□ 0.01
SNRPA1-207ENST00000559309 DRG1Q9Y295 367 aaKnown RBP15.09■□□□□ 0.01
SNRPA1-207ENST00000559309 PPP1R12AO14974 1030 aaPredicted RBP15.08■□□□□ 0
SNRPA1-207ENST00000559309 RNF40O75150 1001 aa15.08■□□□□ 0
SNRPA1-207ENST00000559309 ZNF189O75820 626 aaPredicted RBP15.08■□□□□ 0
SNRPA1-207ENST00000559309 PDGFBP01127 241 aaPredicted RBP15.08■□□□□ 0
SNRPA1-207ENST00000559309 ITGAVP06756 1048 aa15.08■□□□□ 0
SNRPA1-207ENST00000559309 RBP3P10745 1247 aa15.08■□□□□ 0
SNRPA1-207ENST00000559309 CSNK1DP48730 415 aa15.08■□□□□ 0
SNRPA1-207ENST00000559309 SLC10A7Q0GE19 358 aa15.08■□□□□ 0
SNRPA1-207ENST00000559309 LRRC32Q14392 662 aa15.08■□□□□ 0
SNRPA1-207ENST00000559309 LONRF2Q1L5Z9 754 aa15.08■□□□□ 0
SNRPA1-207ENST00000559309 HNRNPA1L2Q32P51 320 aaKnown RBP15.08■□□□□ 0
SNRPA1-207ENST00000559309 TIGD7Q6NT04 549 aaPredicted RBP15.08■□□□□ 0
SNRPA1-207ENST00000559309 PKN3Q6P5Z2 889 aa15.08■□□□□ 0
SNRPA1-207ENST00000559309 LINGO4Q6UY18 593 aa15.08■□□□□ 0
SNRPA1-207ENST00000559309 KLHDC8BQ8IXV7 354 aa15.08■□□□□ 0
SNRPA1-207ENST00000559309 CCDC33Q8N5R6 958 aa15.08■□□□□ 0
SNRPA1-207ENST00000559309 CNTD1Q8N815 330 aa15.08■□□□□ 0
SNRPA1-207ENST00000559309 ZNF513Q8N8E2 541 aaPredicted RBP15.08■□□□□ 0
SNRPA1-207ENST00000559309 CYB5D2Q8WUJ1 264 aa15.08■□□□□ 0
SNRPA1-207ENST00000559309 UCMAQ8WVF2 138 aa15.08■□□□□ 0
SNRPA1-207ENST00000559309 TFB1MQ8WVM0 346 aaKnown RBP15.08■□□□□ 0
SNRPA1-207ENST00000559309 PTPRN2Q92932 1015 aa15.08■□□□□ 0
SNRPA1-207ENST00000559309 HAUS1Q96CS2 278 aa15.08■□□□□ 0
SNRPA1-207ENST00000559309 RPL10LQ96L21 214 aaKnown RBP15.08■□□□□ 0
SNRPA1-207ENST00000559309 NAP1L3Q99457 506 aaPredicted RBP15.08■□□□□ 0
SNRPA1-207ENST00000559309 IER2Q9BTL4 223 aa15.08■□□□□ 0
SNRPA1-207ENST00000559309 CIPCQ9C0C6 399 aa15.08■□□□□ 0
SNRPA1-207ENST00000559309 CHRDQ9H2X0 955 aa15.08■□□□□ 0
SNRPA1-207ENST00000559309 HOMER3Q9NSC5 361 aa15.08■□□□□ 0
SNRPA1-207ENST00000559309 RBM12Q9NTZ6 932 aaKnown RBP15.08■□□□□ 0
SNRPA1-207ENST00000559309 CDC23Q9UJX2 597 aa15.08■□□□□ 0
SNRPA1-207ENST00000559309 HPCAL4Q9UM19 191 aa15.08■□□□□ 0
SNRPA1-207ENST00000559309 ATP8A1Q9Y2Q0 1164 aa15.08■□□□□ 0
SNRPA1-207ENST00000559309 A0A1W2PQF6 199 aa15.07■□□□□ 0
SNRPA1-207ENST00000559309 TMEM221A6NGB7 291 aa15.07■□□□□ 0
SNRPA1-207ENST00000559309 FAM170BA6NMN3 283 aa15.07■□□□□ 0
SNRPA1-207ENST00000559309 WASH3PC4AMC7 463 aa15.07■□□□□ 0
SNRPA1-207ENST00000559309 K7ERQ8 282 aa15.07■□□□□ 0
SNRPA1-207ENST00000559309 M0R296 226 aa15.07■□□□□ 0
SNRPA1-207ENST00000559309 MCF2LO15068 1137 aa15.07■□□□□ 0
SNRPA1-207ENST00000559309 MUSKO15146 869 aa15.07■□□□□ 0
SNRPA1-207ENST00000559309 TMCC1O94876 653 aa15.07■□□□□ 0
SNRPA1-207ENST00000559309 AOC1P19801 751 aa15.07■□□□□ 0
SNRPA1-207ENST00000559309 NTSR1P30989 418 aa15.07■□□□□ 0
SNRPA1-207ENST00000559309 MAGEA9P43362 315 aa15.07■□□□□ 0
SNRPA1-207ENST00000559309 EIF3EP60228 445 aaKnown RBP15.07■□□□□ 0
SNRPA1-207ENST00000559309 NSUN2Q08J23 767 aaKnown RBP eCLIP15.07■□□□□ 0
SNRPA1-207ENST00000559309 ZBTB17Q13105 803 aa15.07■□□□□ 0
SNRPA1-207ENST00000559309 CAMK2GQ13555 558 aaPredicted RBP15.07■□□□□ 0
SNRPA1-207ENST00000559309 TUBB2AQ13885 445 aa15.07■□□□□ 0
SNRPA1-207ENST00000559309 LBRQ14739 615 aaKnown RBP15.07■□□□□ 0
SNRPA1-207ENST00000559309 C22orf39Q6P5X5 142 aa15.07■□□□□ 0
SNRPA1-207ENST00000559309 PGBD5Q8N414 524 aa15.07■□□□□ 0
SNRPA1-207ENST00000559309 LRRN4Q8WUT4 740 aa15.07■□□□□ 0
SNRPA1-207ENST00000559309 C1orf54Q8WWF1 131 aa15.07■□□□□ 0
SNRPA1-207ENST00000559309 ATG4AQ8WYN0 398 aa15.07■□□□□ 0
SNRPA1-207ENST00000559309 SLCO2A1Q92959 643 aa15.07■□□□□ 0
SNRPA1-207ENST00000559309 TADA1Q96BN2 335 aa15.07■□□□□ 0
SNRPA1-207ENST00000559309 NSMCE3Q96MG7 304 aa15.07■□□□□ 0
SNRPA1-207ENST00000559309 MGME1Q9BQP7 344 aa15.07■□□□□ 0
SNRPA1-207ENST00000559309 TUBB2BQ9BVA1 445 aa15.07■□□□□ 0
SNRPA1-207ENST00000559309 LMAN1LQ9HAT1 526 aa15.07■□□□□ 0
SNRPA1-207ENST00000559309 UBA2Q9UBT2 640 aaPredicted RBP15.07■□□□□ 0
SNRPA1-207ENST00000559309 SLC25A13Q9UJS0 675 aa15.07■□□□□ 0
SNRPA1-207ENST00000559309 MMP17Q9ULZ9 603 aa15.07■□□□□ 0
SNRPA1-207ENST00000559309 NDRG2Q9UN36 371 aaKnown RBP15.07■□□□□ 0
SNRPA1-207ENST00000559309 NEU2Q9Y3R4 380 aa15.07■□□□□ 0
SNRPA1-207ENST00000559309 MRFAP1Q9Y605 127 aa15.07■□□□□ 0
SNRPA1-207ENST00000559309 STON1Q9Y6Q2 735 aa15.07■□□□□ 0
SNRPA1-207ENST00000559309 TARSL2A2RTX5 802 aaKnown RBP15.06■□□□□ 0
SNRPA1-207ENST00000559309 C5orf60A6NFR6 353 aa15.06■□□□□ 0
SNRPA1-207ENST00000559309 TTC34A8MYJ7 566 aa15.06■□□□□ 0
SNRPA1-207ENST00000559309 SGK1O00141 431 aa15.06■□□□□ 0
SNRPA1-207ENST00000559309 MTSS1O43312 755 aa15.06■□□□□ 0
SNRPA1-207ENST00000559309 PAPSS2O95340 614 aaPredicted RBP15.06■□□□□ 0
SNRPA1-207ENST00000559309 GSRP00390 522 aa15.06■□□□□ 0
SNRPA1-207ENST00000559309 CCNB1P14635 433 aa15.06■□□□□ 0
SNRPA1-207ENST00000559309 PRKCHP24723 683 aa15.06■□□□□ 0
SNRPA1-207ENST00000559309 PTPN3P26045 913 aa15.06■□□□□ 0
SNRPA1-207ENST00000559309 RBL1P28749 1068 aa15.06■□□□□ 0
SNRPA1-207ENST00000559309 RGRP47804 291 aa15.06■□□□□ 0
SNRPA1-207ENST00000559309 CLCN5P51795 746 aa15.06■□□□□ 0
SNRPA1-207ENST00000559309 BYSLQ13895 437 aaKnown RBP15.06■□□□□ 0
SNRPA1-207ENST00000559309 IHHQ14623 411 aa15.06■□□□□ 0
SNRPA1-207ENST00000559309 DLG2Q15700 870 aa15.06■□□□□ 0
SNRPA1-207ENST00000559309 TEX44Q53QW1 395 aa15.06■□□□□ 0
SNRPA1-207ENST00000559309 C2orf27AQ580R0 203 aa15.06■□□□□ 0
SNRPA1-207ENST00000559309 C9orf64Q5T6V5 341 aa15.06■□□□□ 0
SNRPA1-207ENST00000559309 TTC27Q6P3X3 843 aa15.06■□□□□ 0
SNRPA1-207ENST00000559309 Q6ZS52 159 aa15.06■□□□□ 0
SNRPA1-207ENST00000559309 TRMT11Q7Z4G4 463 aaKnown RBP15.06■□□□□ 0
SNRPA1-207ENST00000559309 ZC3H18Q86VM9 953 aaKnown RBP15.06■□□□□ 0
SNRPA1-207ENST00000559309 CDKL3Q8IVW4 592 aaPredicted RBP15.06■□□□□ 0
SNRPA1-207ENST00000559309 PCDH20Q8N6Y1 951 aaKnown RBP15.06■□□□□ 0
SNRPA1-207ENST00000559309 OR2A12Q8NGT7 310 aa15.06■□□□□ 0
SNRPA1-207ENST00000559309 KIF18AQ8NI77 898 aa15.06■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms