RNA–Protein interactions for RNA: ENST00000558952.1

CRNDE-205, Transcript of colorectal neoplasia differentially expressed, humanhuman

TSL 4

Gene CRNDE, Length 600 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNDE-205ENST00000558952 AGBL4Q5VU57 503 aa21.93■■□□□ 1.1
CRNDE-205ENST00000558952 ZNF571Q7Z3V5 609 aaPredicted RBP21.93■■□□□ 1.1
CRNDE-205ENST00000558952 TMC6Q7Z403 805 aa21.93■■□□□ 1.1
CRNDE-205ENST00000558952 ZNF354CQ86Y25 554 aa21.93■■□□□ 1.1
CRNDE-205ENST00000558952 SETD7Q8WTS6 366 aaKnown RBP21.93■■□□□ 1.1
CRNDE-205ENST00000558952 ARHGEF2Q92974 986 aaKnown RBP21.93■■□□□ 1.1
CRNDE-205ENST00000558952 PPP1R16AQ96I34 528 aa21.93■■□□□ 1.1
CRNDE-205ENST00000558952 SERAC1Q96JX3 654 aa21.93■■□□□ 1.1
CRNDE-205ENST00000558952 MAGEB5Q9BZ81 275 aa21.93■■□□□ 1.1
CRNDE-205ENST00000558952 NDFIP2Q9NV92 336 aa21.93■■□□□ 1.1
CRNDE-205ENST00000558952 FNDC3AQ9Y2H6 1198 aaKnown RBP21.93■■□□□ 1.1
CRNDE-205ENST00000558952 CXorf51AA0A1B0GTR3 108 aa21.92■■□□□ 1.1
CRNDE-205ENST00000558952 VILLO15195 856 aa21.92■■□□□ 1.1
CRNDE-205ENST00000558952 CREB3O43889 395 aa21.92■■□□□ 1.1
CRNDE-205ENST00000558952 GZMAP12544 262 aa21.92■■□□□ 1.1
CRNDE-205ENST00000558952 PSMA2P25787 234 aa21.92■■□□□ 1.1
CRNDE-205ENST00000558952 CD38P28907 300 aa21.92■■□□□ 1.1
CRNDE-205ENST00000558952 NUDT1P36639 197 aa21.92■■□□□ 1.1
CRNDE-205ENST00000558952 ACVRL1P37023 503 aa21.92■■□□□ 1.1
CRNDE-205ENST00000558952 PPP2CBP62714 309 aa21.92■■□□□ 1.1
CRNDE-205ENST00000558952 PPP2CAP67775 309 aa21.92■■□□□ 1.1
CRNDE-205ENST00000558952 MAMLD1Q13495 774 aa21.92■■□□□ 1.1
CRNDE-205ENST00000558952 POLD3Q15054 466 aaPredicted RBP21.92■■□□□ 1.1
CRNDE-205ENST00000558952 DPY19L3Q6ZPD9 716 aa21.92■■□□□ 1.1
CRNDE-205ENST00000558952 PYROXD2Q8N2H3 581 aa21.92■■□□□ 1.1
CRNDE-205ENST00000558952 CHST14Q8NCH0 376 aa21.92■■□□□ 1.1
CRNDE-205ENST00000558952 GRIN3AQ8TCU5 1115 aa21.92■■□□□ 1.1
CRNDE-205ENST00000558952 TRIM11Q96F44 468 aa21.92■■□□□ 1.1
CRNDE-205ENST00000558952 CAMK1GQ96NX5 476 aa21.92■■□□□ 1.1
CRNDE-205ENST00000558952 EBF2Q9HAK2 575 aa21.92■■□□□ 1.1
CRNDE-205ENST00000558952 FZD10Q9ULW2 581 aa21.92■■□□□ 1.1
CRNDE-205ENST00000558952 NEU3Q9UQ49 428 aa21.92■■□□□ 1.1
CRNDE-205ENST00000558952 FCF1Q9Y324 198 aaKnown RBP21.92■■□□□ 1.1
CRNDE-205ENST00000558952 PCDHGB2Q9Y5G2 931 aa21.92■■□□□ 1.1
CRNDE-205ENST00000558952 SPTBN2O15020 2390 aa21.92■■□□□ 1.1
CRNDE-205ENST00000558952 DOCK4Q8N1I0 1966 aa21.91■■□□□ 1.1
CRNDE-205ENST00000558952 ATMINO43313 823 aaPredicted RBP21.91■■□□□ 1.1
CRNDE-205ENST00000558952 LATO43561 262 aa21.91■■□□□ 1.1
CRNDE-205ENST00000558952 FTLP02792 175 aaPredicted RBP21.91■■□□□ 1.1
CRNDE-205ENST00000558952 CTSKP43235 329 aa21.91■■□□□ 1.1
CRNDE-205ENST00000558952 CCT8P50990 548 aa21.91■■□□□ 1.1
CRNDE-205ENST00000558952 TRIP6Q15654 476 aaKnown RBP21.91■■□□□ 1.1
CRNDE-205ENST00000558952 SKOR2Q2VWA4 1001 aaPredicted RBP21.91■■□□□ 1.1
CRNDE-205ENST00000558952 TDRD12Q587J7 1177 aaKnown RBP21.91■■□□□ 1.1
CRNDE-205ENST00000558952 CARD16Q5EG05 197 aa21.91■■□□□ 1.1
CRNDE-205ENST00000558952 ARSIQ5FYB1 569 aa21.91■■□□□ 1.1
CRNDE-205ENST00000558952 E4F1Q66K89 784 aaPredicted RBP21.91■■□□□ 1.1
CRNDE-205ENST00000558952 PLEKHA7Q6IQ23 1121 aa21.91■■□□□ 1.1
CRNDE-205ENST00000558952 TRIM69Q86WT6 500 aa21.91■■□□□ 1.1
CRNDE-205ENST00000558952 RTL3Q8N8U3 475 aaKnown RBP21.91■■□□□ 1.1
CRNDE-205ENST00000558952 CATSPERBQ9H7T0 1116 aa21.91■■□□□ 1.1
CRNDE-205ENST00000558952 PREBQ9HCU5 417 aa21.91■■□□□ 1.1
CRNDE-205ENST00000558952 SCINQ9Y6U3 715 aa21.91■■□□□ 1.1
CRNDE-205ENST00000558952 ASCC3Q8N3C0 2202 aaKnown RBP21.9■■□□□ 1.1
CRNDE-205ENST00000558952 A0A1W2PQJ5 194 aa21.9■■□□□ 1.1
CRNDE-205ENST00000558952 C10orf142B7Z368 130 aa21.9■■□□□ 1.1
CRNDE-205ENST00000558952 FLRT2O43155 660 aa21.9■■□□□ 1.1
CRNDE-205ENST00000558952 DFNA5O60443 496 aa21.9■■□□□ 1.1
CRNDE-205ENST00000558952 SKILP12757 684 aa21.9■■□□□ 1.1
CRNDE-205ENST00000558952 MAT2AP31153 395 aaKnown RBP21.9■■□□□ 1.1
CRNDE-205ENST00000558952 OGDHQ02218 1023 aa21.9■■□□□ 1.1
CRNDE-205ENST00000558952 ZSCAN23Q3MJ62 389 aa21.9■■□□□ 1.1
CRNDE-205ENST00000558952 SETMARQ53H47 684 aaPredicted RBP21.9■■□□□ 1.1
CRNDE-205ENST00000558952 NAPEPLDQ6IQ20 393 aa21.9■■□□□ 1.1
CRNDE-205ENST00000558952 VPS36Q86VN1 386 aa21.9■■□□□ 1.1
CRNDE-205ENST00000558952 RYBPQ8N488 228 aaPredicted RBP21.9■■□□□ 1.1
CRNDE-205ENST00000558952 ISG20Q96AZ6 181 aaKnown RBP21.9■■□□□ 1.1
CRNDE-205ENST00000558952 ZNF653Q96CK0 615 aa21.9■■□□□ 1.1
CRNDE-205ENST00000558952 IQCDQ96DY2 449 aa21.9■■□□□ 1.1
CRNDE-205ENST00000558952 HEPHQ9BQS7 1158 aa21.9■■□□□ 1.1
CRNDE-205ENST00000558952 CNOT8Q9UFF9 292 aaKnown RBP21.9■■□□□ 1.1
CRNDE-205ENST00000558952 DMTF1Q9Y222 760 aa21.9■■□□□ 1.1
CRNDE-205ENST00000558952 ZSCAN5CA6NGD5 496 aaPredicted RBP21.89■■□□□ 1.09
CRNDE-205ENST00000558952 DDX3XO00571 662 aaKnown RBP eCLIP21.89■■□□□ 1.095e-7■■□□□ 13.5
CRNDE-205ENST00000558952 KCNK3O14649 394 aa21.89■■□□□ 1.09
CRNDE-205ENST00000558952 FGF10O15520 208 aaPredicted RBP21.89■■□□□ 1.09
CRNDE-205ENST00000558952 ZNF821O75541 412 aaPredicted RBP21.89■■□□□ 1.09
CRNDE-205ENST00000558952 LEFTY1O75610 366 aa21.89■■□□□ 1.09
CRNDE-205ENST00000558952 RNF8O76064 485 aa21.89■■□□□ 1.09
CRNDE-205ENST00000558952 TRIM16O95361 564 aa21.89■■□□□ 1.09
CRNDE-205ENST00000558952 MYBL1P10243 752 aa21.89■■□□□ 1.09
CRNDE-205ENST00000558952 CCNHP51946 323 aaPredicted RBP21.89■■□□□ 1.09
CRNDE-205ENST00000558952 FAM193AP78312 1265 aa21.89■■□□□ 1.09
CRNDE-205ENST00000558952 ZNF423Q2M1K9 1284 aa21.89■■□□□ 1.09
CRNDE-205ENST00000558952 PIP5KL1Q5T9C9 394 aa21.89■■□□□ 1.09
CRNDE-205ENST00000558952 ERN2Q76MJ5 926 aaKnown RBP21.89■■□□□ 1.09
CRNDE-205ENST00000558952 ARRDC3Q96B67 414 aa21.89■■□□□ 1.09
CRNDE-205ENST00000558952 TM6SF2Q9BZW4 377 aa21.89■■□□□ 1.09
CRNDE-205ENST00000558952 MRPL47Q9HD33 250 aaKnown RBP21.89■■□□□ 1.09
CRNDE-205ENST00000558952 DONSONQ9NYP3 566 aa21.89■■□□□ 1.09
CRNDE-205ENST00000558952 HECAQ9UBI9 543 aaPredicted RBP21.89■■□□□ 1.09
CRNDE-205ENST00000558952 PCOLCE2Q9UKZ9 415 aa21.89■■□□□ 1.09
CRNDE-205ENST00000558952 BZW2Q9Y6E2 419 aaKnown RBP21.89■■□□□ 1.09
CRNDE-205ENST00000558952 CNOT1A5YKK6 2376 aaKnown RBP21.89■■□□□ 1.09
CRNDE-205ENST00000558952 CACNA1EQ15878 2313 aa21.89■■□□□ 1.09
CRNDE-205ENST00000558952 PLXNA2O75051 1894 aa21.88■■□□□ 1.09
CRNDE-205ENST00000558952 H0Y8X5 98 aa21.88■■□□□ 1.09
CRNDE-205ENST00000558952 KDELR3O43731 214 aa21.88■■□□□ 1.09
CRNDE-205ENST00000558952 RNGTTO60942 597 aaKnown RBP21.88■■□□□ 1.09
CRNDE-205ENST00000558952 TPM3P06753 285 aa21.88■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms