RNA–Protein interactions for RNA: ENST00000558544.5

TPM1-214, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 1,399 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-214ENST00000558544 TARSL2A2RTX5 802 aaKnown RBP17.77■□□□□ 0.43
TPM1-214ENST00000558544 ENC1O14682 589 aa17.77■□□□□ 0.43
TPM1-214ENST00000558544 MAFKO60675 156 aa17.77■□□□□ 0.43
TPM1-214ENST00000558544 ALDH1A2O94788 518 aa17.77■□□□□ 0.43
TPM1-214ENST00000558544 TDGF1P13385 188 aa17.77■□□□□ 0.43
TPM1-214ENST00000558544 PECAM1P16284 738 aaPredicted RBP17.77■□□□□ 0.43
TPM1-214ENST00000558544 GABRG2P18507 467 aa17.77■□□□□ 0.43
TPM1-214ENST00000558544 TGM2P21980 687 aa17.77■□□□□ 0.43
TPM1-214ENST00000558544 NUBP1P53384 320 aa17.77■□□□□ 0.43
TPM1-214ENST00000558544 COPAP53621 1224 aa17.77■□□□□ 0.43
TPM1-214ENST00000558544 DMWDQ09019 674 aa17.77■□□□□ 0.43
TPM1-214ENST00000558544 C9orf64Q5T6V5 341 aa17.77■□□□□ 0.43
TPM1-214ENST00000558544 SEL1L2Q5TEA6 688 aa17.77■□□□□ 0.43
TPM1-214ENST00000558544 HEATR6Q6AI08 1181 aaKnown RBP17.77■□□□□ 0.43
TPM1-214ENST00000558544 BBS12Q6ZW61 710 aa17.77■□□□□ 0.43
TPM1-214ENST00000558544 CAMKK1Q8N5S9 505 aa17.77■□□□□ 0.43
TPM1-214ENST00000558544 MDGA1Q8NFP4 955 aa17.77■□□□□ 0.43
TPM1-214ENST00000558544 CEP44Q9C0F1 390 aa17.77■□□□□ 0.43
TPM1-214ENST00000558544 BCCIPQ9P287 314 aaKnown RBP eCLIP17.77■□□□□ 0.43
TPM1-214ENST00000558544 SAE1Q9UBE0 346 aaPredicted RBP17.77■□□□□ 0.43
TPM1-214ENST00000558544 FBXO4Q9UKT5 387 aa17.77■□□□□ 0.43
TPM1-214ENST00000558544 KCNK3O14649 394 aa17.76■□□□□ 0.43
TPM1-214ENST00000558544 ZNF821O75541 412 aaPredicted RBP17.76■□□□□ 0.43
TPM1-214ENST00000558544 NDUFV2P19404 249 aa17.76■□□□□ 0.43
TPM1-214ENST00000558544 MX2P20592 715 aa17.76■□□□□ 0.43
TPM1-214ENST00000558544 INO80DQ53TQ3 878 aaPredicted RBP17.76■□□□□ 0.43
TPM1-214ENST00000558544 CCDC181Q5TID7 509 aa17.76■□□□□ 0.43
TPM1-214ENST00000558544 STK40Q8N2I9 435 aa17.76■□□□□ 0.43
TPM1-214ENST00000558544 PGBD3Q8N328 593 aa17.76■□□□□ 0.43
TPM1-214ENST00000558544 PCDH20Q8N6Y1 951 aaKnown RBP17.76■□□□□ 0.43
TPM1-214ENST00000558544 OR2T3Q8NH03 318 aa17.76■□□□□ 0.43
TPM1-214ENST00000558544 CASKIN2Q8WXE0 1202 aa17.76■□□□□ 0.43
TPM1-214ENST00000558544 OLFM3Q96PB7 478 aa17.76■□□□□ 0.43
TPM1-214ENST00000558544 TPSD1Q9BZJ3 242 aa17.76■□□□□ 0.43
TPM1-214ENST00000558544 TM6SF2Q9BZW4 377 aa17.76■□□□□ 0.43
TPM1-214ENST00000558544 MKRN2Q9H000 416 aaKnown RBP17.76■□□□□ 0.43
TPM1-214ENST00000558544 EFR3BQ9Y2G0 817 aa17.76■□□□□ 0.43
TPM1-214ENST00000558544 JRKLQ9Y4A0 524 aa17.76■□□□□ 0.43
TPM1-214ENST00000558544 CEP192Q8TEP8 1941 aa17.75■□□□□ 0.43
TPM1-214ENST00000558544 MSNP26038 577 aaKnown RBP17.75■□□□□ 0.43
TPM1-214ENST00000558544 RHOAP61586 193 aa17.75■□□□□ 0.43
TPM1-214ENST00000558544 CYTH1Q15438 398 aa17.75■□□□□ 0.43
TPM1-214ENST00000558544 TMCO4Q5TGY1 634 aa17.75■□□□□ 0.43
TPM1-214ENST00000558544 KIAA1324Q6UXG2 1013 aaKnown RBP17.75■□□□□ 0.43
TPM1-214ENST00000558544 METTL3Q86U44 580 aaKnown RBP17.75■□□□□ 0.43
TPM1-214ENST00000558544 RASSF3Q86WH2 238 aa17.75■□□□□ 0.43
TPM1-214ENST00000558544 LRRC49Q8IUZ0 686 aa17.75■□□□□ 0.43
TPM1-214ENST00000558544 CCNYQ8ND76 341 aa17.75■□□□□ 0.43
TPM1-214ENST00000558544 P3H4Q92791 437 aa17.75■□□□□ 0.43
TPM1-214ENST00000558544 ISG20Q96AZ6 181 aaKnown RBP17.75■□□□□ 0.43
TPM1-214ENST00000558544 HDAC11Q96DB2 347 aa17.75■□□□□ 0.43
TPM1-214ENST00000558544 ZNF599Q96NL3 588 aa17.75■□□□□ 0.43
TPM1-214ENST00000558544 LGMNQ99538 433 aa17.75■□□□□ 0.43
TPM1-214ENST00000558544 CARD9Q9H257 536 aa17.75■□□□□ 0.43
TPM1-214ENST00000558544 KCND1Q9NSA2 647 aa17.75■□□□□ 0.43
TPM1-214ENST00000558544 APOC4-APOC2K7ER74 178 aa17.74■□□□□ 0.43
TPM1-214ENST00000558544 PPP1R12AO14974 1030 aaPredicted RBP17.74■□□□□ 0.43
TPM1-214ENST00000558544 ZBTB24O43167 697 aaPredicted RBP17.74■□□□□ 0.43
TPM1-214ENST00000558544 TJP3O95049 919 aa17.74■□□□□ 0.43
TPM1-214ENST00000558544 PEX11BO96011 259 aa17.74■□□□□ 0.43
TPM1-214ENST00000558544 APOC2P02655 101 aa17.74■□□□□ 0.43
TPM1-214ENST00000558544 ATP1A1P05023 1023 aaKnown RBP17.74■□□□□ 0.43
TPM1-214ENST00000558544 SP9P0CG40 484 aa17.74■□□□□ 0.43
TPM1-214ENST00000558544 RECQLP46063 649 aaPredicted RBP17.74■□□□□ 0.43
TPM1-214ENST00000558544 NR2C2P49116 596 aa17.74■□□□□ 0.43
TPM1-214ENST00000558544 FNTBP49356 437 aa17.74■□□□□ 0.43
TPM1-214ENST00000558544 SLC10A7Q0GE19 358 aa17.74■□□□□ 0.43
TPM1-214ENST00000558544 ELAVL3Q14576 367 aaKnown RBP17.74■□□□□ 0.43
TPM1-214ENST00000558544 LBRQ14739 615 aaKnown RBP17.74■□□□□ 0.43
TPM1-214ENST00000558544 PDK1Q15118 436 aa17.74■□□□□ 0.43
TPM1-214ENST00000558544 ATXN7L2Q5T6C5 722 aaPredicted RBP17.74■□□□□ 0.43
TPM1-214ENST00000558544 TIGD7Q6NT04 549 aaPredicted RBP17.74■□□□□ 0.43
TPM1-214ENST00000558544 B4GALNT4Q76KP1 1039 aa17.74■□□□□ 0.43
TPM1-214ENST00000558544 TMPRSS6Q8IU80 811 aa17.74■□□□□ 0.43
TPM1-214ENST00000558544 RYBPQ8N488 228 aaPredicted RBP17.74■□□□□ 0.43
TPM1-214ENST00000558544 CHST14Q8NCH0 376 aa17.74■□□□□ 0.43
TPM1-214ENST00000558544 PRSS33Q8NF86 280 aa17.74■□□□□ 0.43
TPM1-214ENST00000558544 OR2A12Q8NGT7 310 aa17.74■□□□□ 0.43
TPM1-214ENST00000558544 NSMCE1Q8WV22 266 aa17.74■□□□□ 0.43
TPM1-214ENST00000558544 OR8D1Q8WZ84 308 aa17.74■□□□□ 0.43
TPM1-214ENST00000558544 EXOC2Q96KP1 924 aa17.74■□□□□ 0.43
TPM1-214ENST00000558544 MRGPRX1Q96LB2 322 aa17.74■□□□□ 0.43
TPM1-214ENST00000558544 CCDC114Q96M63 670 aa17.74■□□□□ 0.43
TPM1-214ENST00000558544 CINPQ9BW66 212 aaPredicted RBP17.74■□□□□ 0.43
TPM1-214ENST00000558544 FBRSQ9HAH7 460 aa17.74■□□□□ 0.43
TPM1-214ENST00000558544 LHX3Q9UBR4 397 aa17.74■□□□□ 0.43
TPM1-214ENST00000558544 ZKSCAN5Q9Y2L8 839 aa17.74■□□□□ 0.43
TPM1-214ENST00000558544 DMDP11532 3685 aa17.73■□□□□ 0.43
TPM1-214ENST00000558544 USP34Q70CQ2 3546 aa17.73■□□□□ 0.43
TPM1-214ENST00000558544 AXIN1O15169 862 aa17.73■□□□□ 0.43
TPM1-214ENST00000558544 GSRP00390 522 aa17.73■□□□□ 0.43
TPM1-214ENST00000558544 CCNCP24863 283 aa17.73■□□□□ 0.43
TPM1-214ENST00000558544 CXCR5P32302 372 aa17.73■□□□□ 0.43
TPM1-214ENST00000558544 CCNHP51946 323 aaPredicted RBP17.73■□□□□ 0.43
TPM1-214ENST00000558544 GNG11P61952 73 aa17.73■□□□□ 0.43
TPM1-214ENST00000558544 RPS14P62263 151 aaKnown RBP17.73■□□□□ 0.43
TPM1-214ENST00000558544 SNRPD1P62314 119 aaKnown RBP17.73■□□□□ 0.43
TPM1-214ENST00000558544 PPIDQ08752 370 aaKnown RBP17.73■□□□□ 0.43
TPM1-214ENST00000558544 AP1B1Q10567 949 aa17.73■□□□□ 0.43
TPM1-214ENST00000558544 ZNF235Q14590 738 aa17.73■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms