RNA–Protein interactions for RNA: ENST00000558072.5

TPM1-209, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 525 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-209ENST00000558072 POLR1EQ9GZS1 481 aaKnown RBP12.64□□□□□ -0.39
TPM1-209ENST00000558072 SLC2A4RGQ9NR83 387 aa12.64□□□□□ -0.39
TPM1-209ENST00000558072 VPS45Q9NRW7 570 aa12.64□□□□□ -0.39
TPM1-209ENST00000558072 RBM22Q9NW64 420 aaKnown RBP eCLIP12.64□□□□□ -0.39
TPM1-209ENST00000558072 SEPT10Q9P0V9 454 aa12.64□□□□□ -0.39
TPM1-209ENST00000558072 WHRNQ9P202 907 aa12.64□□□□□ -0.39
TPM1-209ENST00000558072 CLEC4EQ9ULY5 219 aa12.64□□□□□ -0.39
TPM1-209ENST00000558072 FARP1Q9Y4F1 1045 aaPredicted RBP12.64□□□□□ -0.39
TPM1-209ENST00000558072 NUP205Q92621 2012 aa12.63□□□□□ -0.39
TPM1-209ENST00000558072 A0A0D9SEW6 157 aa12.63□□□□□ -0.39
TPM1-209ENST00000558072 E7EVH7 732 aa12.63□□□□□ -0.39
TPM1-209ENST00000558072 TRIM24O15164 1050 aa12.63□□□□□ -0.39
TPM1-209ENST00000558072 JCHAINP01591 159 aa12.63□□□□□ -0.39
TPM1-209ENST00000558072 CISD3P0C7P0 127 aa12.63□□□□□ -0.39
TPM1-209ENST00000558072 PTPN3P26045 913 aa12.63□□□□□ -0.39
TPM1-209ENST00000558072 TNFRSF4P43489 277 aa12.63□□□□□ -0.39
TPM1-209ENST00000558072 CSNK1DP48730 415 aa12.63□□□□□ -0.39
TPM1-209ENST00000558072 RAD51Q06609 339 aa12.63□□□□□ -0.39
TPM1-209ENST00000558072 MESP2Q0VG99 397 aa12.63□□□□□ -0.39
TPM1-209ENST00000558072 GAB4Q2WGN9 574 aa12.63□□□□□ -0.39
TPM1-209ENST00000558072 FSCBQ5H9T9 825 aa12.63□□□□□ -0.39
TPM1-209ENST00000558072 ANKRD20A2Q5SQ80 823 aa12.63□□□□□ -0.39
TPM1-209ENST00000558072 FAM182AQ5T1J6 154 aa12.63□□□□□ -0.39
TPM1-209ENST00000558072 ANKRD20A1Q5TYW2 823 aa12.63□□□□□ -0.39
TPM1-209ENST00000558072 ANKRD20A3Q5VUR7 823 aa12.63□□□□□ -0.39
TPM1-209ENST00000558072 HOOK3Q86VS8 718 aa12.63□□□□□ -0.39
TPM1-209ENST00000558072 SFTPA1Q8IWL2 248 aa12.63□□□□□ -0.39
TPM1-209ENST00000558072 PLPP6Q8IY26 295 aa12.63□□□□□ -0.39
TPM1-209ENST00000558072 NOA1Q8NC60 698 aaKnown RBP12.63□□□□□ -0.39
TPM1-209ENST00000558072 CHFRQ96EP1 664 aa12.63□□□□□ -0.39
TPM1-209ENST00000558072 ALG14Q96F25 216 aa12.63□□□□□ -0.39
TPM1-209ENST00000558072 LMLNQ96KR4 655 aa12.63□□□□□ -0.39
TPM1-209ENST00000558072 PSKH2Q96QS6 385 aa12.63□□□□□ -0.39
TPM1-209ENST00000558072 FAM118BQ9BPY3 351 aa12.63□□□□□ -0.39
TPM1-209ENST00000558072 PDFQ9HBH1 243 aa12.63□□□□□ -0.39
TPM1-209ENST00000558072 GTSE1Q9NYZ3 720 aa12.63□□□□□ -0.39
TPM1-209ENST00000558072 MTRF1LQ9UGC7 380 aaKnown RBP12.63□□□□□ -0.39
TPM1-209ENST00000558072 RSPH14Q9UHP6 348 aa12.63□□□□□ -0.39
TPM1-209ENST00000558072 VPS51Q9UID3 782 aa12.63□□□□□ -0.39
TPM1-209ENST00000558072 TPX2Q9ULW0 747 aaKnown RBP12.63□□□□□ -0.39
TPM1-209ENST00000558072 HS3ST2Q9Y278 367 aa12.63□□□□□ -0.39
TPM1-209ENST00000558072 KIAA1549LQ6ZVL6 1849 aa12.62□□□□□ -0.39
TPM1-209ENST00000558072 A0A1W2PQ67 120 aa12.62□□□□□ -0.39
TPM1-209ENST00000558072 TBC1D3BA6NDS4 549 aa12.62□□□□□ -0.39
TPM1-209ENST00000558072 KCNK1O00180 336 aa12.62□□□□□ -0.39
TPM1-209ENST00000558072 ARNTLO00327 626 aa12.62□□□□□ -0.39
TPM1-209ENST00000558072 MAP3K6O95382 1288 aa12.62□□□□□ -0.39
TPM1-209ENST00000558072 DLDP09622 509 aaKnown RBP12.62□□□□□ -0.39
TPM1-209ENST00000558072 DRD1P21728 446 aa12.62□□□□□ -0.39
TPM1-209ENST00000558072 MZF1P28698 734 aaPredicted RBP12.62□□□□□ -0.39
TPM1-209ENST00000558072 CD70P32970 193 aa12.62□□□□□ -0.39
TPM1-209ENST00000558072 RECQLP46063 649 aaPredicted RBP12.62□□□□□ -0.39
TPM1-209ENST00000558072 LMAN1P49257 510 aa12.62□□□□□ -0.39
TPM1-209ENST00000558072 SERPINH1P50454 418 aaKnown RBP12.62□□□□□ -0.39
TPM1-209ENST00000558072 GEMP55040 296 aa12.62□□□□□ -0.39
TPM1-209ENST00000558072 SNRPD1P62314 119 aaKnown RBP12.62□□□□□ -0.39
TPM1-209ENST00000558072 GUCY2DQ02846 1103 aa12.62□□□□□ -0.39
TPM1-209ENST00000558072 GPS1Q13098 491 aa12.62□□□□□ -0.39
TPM1-209ENST00000558072 MORF4L2Q15014 288 aa12.62□□□□□ -0.39
TPM1-209ENST00000558072 MAP9Q49MG5 647 aa12.62□□□□□ -0.39
TPM1-209ENST00000558072 FBXO43Q4G163 708 aa12.62□□□□□ -0.39
TPM1-209ENST00000558072 ARMC3Q5W041 872 aa12.62□□□□□ -0.39
TPM1-209ENST00000558072 MBLAC2Q68D91 279 aa12.62□□□□□ -0.39
TPM1-209ENST00000558072 DUPD1Q68J44 220 aa12.62□□□□□ -0.39
TPM1-209ENST00000558072 TRMT11Q7Z4G4 463 aaKnown RBP12.62□□□□□ -0.39
TPM1-209ENST00000558072 LINC00523Q86TU6 105 aa12.62□□□□□ -0.39
TPM1-209ENST00000558072 PHF6Q8IWS0 365 aaKnown RBP eCLIP12.62□□□□□ -0.39
TPM1-209ENST00000558072 PPIL6Q8IXY8 311 aa12.62□□□□□ -0.39
TPM1-209ENST00000558072 ZNF567Q8N184 647 aa12.62□□□□□ -0.39
TPM1-209ENST00000558072 CCDC33Q8N5R6 958 aa12.62□□□□□ -0.39
TPM1-209ENST00000558072 PCDH20Q8N6Y1 951 aaKnown RBP12.62□□□□□ -0.39
TPM1-209ENST00000558072 NAT16Q8N8M0 369 aa12.62□□□□□ -0.39
TPM1-209ENST00000558072 TERB1Q8NA31 727 aa12.62□□□□□ -0.39
TPM1-209ENST00000558072 ATP11CQ8NB49 1132 aa12.62□□□□□ -0.39
TPM1-209ENST00000558072 OR52K2Q8NGK3 314 aa12.62□□□□□ -0.39
TPM1-209ENST00000558072 SEC14L1Q92503 715 aa12.62□□□□□ -0.39
TPM1-209ENST00000558072 SHDQ96IW2 340 aa12.62□□□□□ -0.39
TPM1-209ENST00000558072 FCRL5Q96RD9 977 aa12.62□□□□□ -0.39
TPM1-209ENST00000558072 P2RY13Q9BPV8 354 aa12.62□□□□□ -0.39
TPM1-209ENST00000558072 SLC25A51Q9H1U9 297 aa12.62□□□□□ -0.39
TPM1-209ENST00000558072 GBA3Q9H227 469 aa12.62□□□□□ -0.39
TPM1-209ENST00000558072 EIF2B3Q9NR50 452 aaKnown RBP12.62□□□□□ -0.39
TPM1-209ENST00000558072 ELOVL2Q9NXB9 296 aa12.62□□□□□ -0.39
TPM1-209ENST00000558072 ATP8A1Q9Y2Q0 1164 aa12.62□□□□□ -0.39
TPM1-209ENST00000558072 MRPS17Q9Y2R5 130 aaKnown RBP12.62□□□□□ -0.39
TPM1-209ENST00000558072 NEU2Q9Y3R4 380 aa12.62□□□□□ -0.39
TPM1-209ENST00000558072 CHD5Q8TDI0 1954 aa12.61□□□□□ -0.39
TPM1-209ENST00000558072 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP12.61□□□□□ -0.39
TPM1-209ENST00000558072 J3KR12 359 aa12.61□□□□□ -0.39
TPM1-209ENST00000558072 DNALI1O14645 258 aaPredicted RBP12.61□□□□□ -0.39
TPM1-209ENST00000558072 CTIFO43310 598 aaKnown RBP12.61□□□□□ -0.39
TPM1-209ENST00000558072 ERLIN1O75477 346 aa12.61□□□□□ -0.39
TPM1-209ENST00000558072 ZMPSTE24O75844 475 aa12.61□□□□□ -0.39
TPM1-209ENST00000558072 KAT7O95251 611 aa12.61□□□□□ -0.39
TPM1-209ENST00000558072 IGSF6O95976 241 aa12.61□□□□□ -0.39
TPM1-209ENST00000558072 SERPINF2P08697 491 aa12.61□□□□□ -0.39
TPM1-209ENST00000558072 RHOXF2BP0C7M4 288 aa12.61□□□□□ -0.39
TPM1-209ENST00000558072 VAV1P15498 845 aa12.61□□□□□ -0.39
TPM1-209ENST00000558072 NFKBIAP25963 317 aa12.61□□□□□ -0.39
TPM1-209ENST00000558072 TNFRSF8P28908 595 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms