RNA–Protein interactions for RNA: ENST00000558059.5

SNRPA1-206, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 678 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-206ENST00000558059 ATP11CQ8NB49 1132 aa8.98□□□□□ -0.97
SNRPA1-206ENST00000558059 OR2A12Q8NGT7 310 aa8.98□□□□□ -0.97
SNRPA1-206ENST00000558059 OR2T34Q8NGX1 318 aa8.98□□□□□ -0.97
SNRPA1-206ENST00000558059 OR14C36Q8NHC7 312 aa8.98□□□□□ -0.97
SNRPA1-206ENST00000558059 PIP4K2CQ8TBX8 421 aa8.98□□□□□ -0.97
SNRPA1-206ENST00000558059 TBC1D31Q96DN5 1066 aa8.98□□□□□ -0.97
SNRPA1-206ENST00000558059 MCEEQ96PE7 176 aa8.98□□□□□ -0.97
SNRPA1-206ENST00000558059 ACE2Q9BYF1 805 aaPredicted RBP8.98□□□□□ -0.97
SNRPA1-206ENST00000558059 IL21RQ9HBE5 538 aa8.98□□□□□ -0.97
SNRPA1-206ENST00000558059 TMEM248Q9NWD8 314 aa8.98□□□□□ -0.97
SNRPA1-206ENST00000558059 TDRD6O60522 2096 aaKnown RBP8.98□□□□□ -0.97
SNRPA1-206ENST00000558059 A0A1W2PPC4 97 aa8.97□□□□□ -0.97
SNRPA1-206ENST00000558059 RNF103O00237 685 aa8.97□□□□□ -0.97
SNRPA1-206ENST00000558059 CBX4O00257 560 aa8.97□□□□□ -0.97
SNRPA1-206ENST00000558059 BNIP3LO60238 219 aa8.97□□□□□ -0.97
SNRPA1-206ENST00000558059 RTN2O75298 545 aa8.97□□□□□ -0.97
SNRPA1-206ENST00000558059 FTLP02792 175 aaPredicted RBP8.97□□□□□ -0.97
SNRPA1-206ENST00000558059 PTMSP20962 102 aa8.97□□□□□ -0.97
SNRPA1-206ENST00000558059 L1CAMP32004 1257 aa8.97□□□□□ -0.97
SNRPA1-206ENST00000558059 CHRNA3P32297 505 aa8.97□□□□□ -0.97
SNRPA1-206ENST00000558059 GRIA4P48058 902 aa8.97□□□□□ -0.97
SNRPA1-206ENST00000558059 MAPKAPK2P49137 400 aa8.97□□□□□ -0.97
SNRPA1-206ENST00000558059 CCR5P51681 352 aa8.97□□□□□ -0.97
SNRPA1-206ENST00000558059 AFF3P51826 1226 aaKnown RBP8.97□□□□□ -0.97
SNRPA1-206ENST00000558059 UBASH3AP57075 661 aa8.97□□□□□ -0.97
SNRPA1-206ENST00000558059 ARF5P84085 180 aa8.97□□□□□ -0.97
SNRPA1-206ENST00000558059 KLHL30Q0D2K2 578 aa8.97□□□□□ -0.97
SNRPA1-206ENST00000558059 CNTN1Q12860 1018 aa8.97□□□□□ -0.97
SNRPA1-206ENST00000558059 SLC14A1Q13336 389 aa8.97□□□□□ -0.97
SNRPA1-206ENST00000558059 KIF19Q2TAC6 998 aa8.97□□□□□ -0.97
SNRPA1-206ENST00000558059 HLA-BQ31612 363 aa8.97□□□□□ -0.97
SNRPA1-206ENST00000558059 POM121L1PQ3SYA9 428 aa8.97□□□□□ -0.97
SNRPA1-206ENST00000558059 KCNT1Q5JUK3 1230 aa8.97□□□□□ -0.97
SNRPA1-206ENST00000558059 AGBL4Q5VU57 503 aa8.97□□□□□ -0.97
SNRPA1-206ENST00000558059 FAM46CQ5VWP2 391 aa8.97□□□□□ -0.97
SNRPA1-206ENST00000558059 HGSNATQ68CP4 663 aa8.97□□□□□ -0.97
SNRPA1-206ENST00000558059 PPP1R2P3Q6NXS1 205 aa8.97□□□□□ -0.97
SNRPA1-206ENST00000558059 SCYL2Q6P3W7 929 aa8.97□□□□□ -0.97
SNRPA1-206ENST00000558059 C22orf39Q6P5X5 142 aa8.97□□□□□ -0.97
SNRPA1-206ENST00000558059 DCUN1D2Q6PH85 259 aa8.97□□□□□ -0.97
SNRPA1-206ENST00000558059 LAYNQ6UX15 382 aa8.97□□□□□ -0.97
SNRPA1-206ENST00000558059 SLFN11Q7Z7L1 901 aa8.97□□□□□ -0.97
SNRPA1-206ENST00000558059 ARFGAP1Q8N6T3 406 aa8.97□□□□□ -0.97
SNRPA1-206ENST00000558059 CHST14Q8NCH0 376 aa8.97□□□□□ -0.97
SNRPA1-206ENST00000558059 TMIEQ8NEW7 156 aa8.97□□□□□ -0.97
SNRPA1-206ENST00000558059 ARHGEF2Q92974 986 aaKnown RBP8.97□□□□□ -0.97
SNRPA1-206ENST00000558059 ARRDC3Q96B67 414 aa8.97□□□□□ -0.97
SNRPA1-206ENST00000558059 KDM4CQ9H3R0 1056 aa8.97□□□□□ -0.97
SNRPA1-206ENST00000558059 NOL6Q9H6R4 1146 aaKnown RBP8.97□□□□□ -0.97
SNRPA1-206ENST00000558059 GAREM1Q9H706 876 aa8.97□□□□□ -0.97
SNRPA1-206ENST00000558059 ATP13A1Q9HD20 1204 aa8.97□□□□□ -0.97
SNRPA1-206ENST00000558059 PARVAQ9NVD7 372 aa8.97□□□□□ -0.97
SNRPA1-206ENST00000558059 DNAI1Q9UI46 699 aa8.97□□□□□ -0.97
SNRPA1-206ENST00000558059 FZD10Q9ULW2 581 aa8.97□□□□□ -0.97
SNRPA1-206ENST00000558059 ACTL7AQ9Y615 435 aa8.97□□□□□ -0.97
SNRPA1-206ENST00000558059 TBC1D3DA0A087WVF3 549 aa8.96□□□□□ -0.98
SNRPA1-206ENST00000558059 TBC1D3IA0A087WXS9 549 aa8.96□□□□□ -0.98
SNRPA1-206ENST00000558059 TBC1D3EA0A087X179 549 aa8.96□□□□□ -0.98
SNRPA1-206ENST00000558059 TBC1D3KA0A087X1G2 549 aa8.96□□□□□ -0.98
SNRPA1-206ENST00000558059 CXorf51AA0A1B0GTR3 108 aa8.96□□□□□ -0.98
SNRPA1-206ENST00000558059 A0A1W2PQJ5 194 aa8.96□□□□□ -0.98
SNRPA1-206ENST00000558059 ANKRD62A6NC57 917 aa8.96□□□□□ -0.98
SNRPA1-206ENST00000558059 TBC1D3FA6NER0 549 aaPredicted RBP8.96□□□□□ -0.98
SNRPA1-206ENST00000558059 TMEM191CA6NGB0 347 aa8.96□□□□□ -0.98
SNRPA1-206ENST00000558059 TBC1D3LB9A6J9 549 aa8.96□□□□□ -0.98
SNRPA1-206ENST00000558059 C1QTNF3-AMACRE9PGA6 284 aa8.96□□□□□ -0.98
SNRPA1-206ENST00000558059 WNT9AO14904 365 aa8.96□□□□□ -0.98
SNRPA1-206ENST00000558059 SLC7A4O43246 635 aa8.96□□□□□ -0.98
SNRPA1-206ENST00000558059 LATO43561 262 aa8.96□□□□□ -0.98
SNRPA1-206ENST00000558059 PLRG1O43660 514 aaKnown RBP8.96□□□□□ -0.98
SNRPA1-206ENST00000558059 SH3BP5O60239 455 aa8.96□□□□□ -0.98
SNRPA1-206ENST00000558059 CER1O95813 267 aa8.96□□□□□ -0.98
SNRPA1-206ENST00000558059 WNT1P04628 370 aa8.96□□□□□ -0.98
SNRPA1-206ENST00000558059 TBC1D3HP0C7X1 549 aa8.96□□□□□ -0.98
SNRPA1-206ENST00000558059 ZNF883P0CG24 379 aa8.96□□□□□ -0.98
SNRPA1-206ENST00000558059 CTSKP43235 329 aa8.96□□□□□ -0.98
SNRPA1-206ENST00000558059 SERPINH1P50454 418 aaKnown RBP8.96□□□□□ -0.98
SNRPA1-206ENST00000558059 TAS2R38P59533 333 aa8.96□□□□□ -0.98
SNRPA1-206ENST00000558059 PPP2CBP62714 309 aa8.96□□□□□ -0.98
SNRPA1-206ENST00000558059 RACK1P63244 317 aaKnown RBP8.96□□□□□ -0.98
SNRPA1-206ENST00000558059 PPP2CAP67775 309 aa8.96□□□□□ -0.98
SNRPA1-206ENST00000558059 TPM4P67936 248 aa8.96□□□□□ -0.98
SNRPA1-206ENST00000558059 FAM193AP78312 1265 aa8.96□□□□□ -0.98
SNRPA1-206ENST00000558059 ZNF252P-AS1Q0IIN9 211 aa8.96□□□□□ -0.98
SNRPA1-206ENST00000558059 TEAD4Q15561 434 aa8.96□□□□□ -0.98
SNRPA1-206ENST00000558059 EFHC2Q5JST6 749 aa8.96□□□□□ -0.98
SNRPA1-206ENST00000558059 PIP5KL1Q5T9C9 394 aa8.96□□□□□ -0.98
SNRPA1-206ENST00000558059 TBC1D3GQ6DHY5 549 aa8.96□□□□□ -0.98
SNRPA1-206ENST00000558059 TBC1D3CQ6IPX1 549 aa8.96□□□□□ -0.98
SNRPA1-206ENST00000558059 RETSATQ6NUM9 610 aa8.96□□□□□ -0.98
SNRPA1-206ENST00000558059 IL27RAQ6UWB1 636 aa8.96□□□□□ -0.98
SNRPA1-206ENST00000558059 DBX2Q6ZNG2 339 aa8.96□□□□□ -0.98
SNRPA1-206ENST00000558059 DPY19L3Q6ZPD9 716 aa8.96□□□□□ -0.98
SNRPA1-206ENST00000558059 TMC6Q7Z403 805 aa8.96□□□□□ -0.98
SNRPA1-206ENST00000558059 TBC1D3Q8IZP1 549 aaPredicted RBP8.96□□□□□ -0.98
SNRPA1-206ENST00000558059 PCDH20Q8N6Y1 951 aaKnown RBP8.96□□□□□ -0.98
SNRPA1-206ENST00000558059 SYN2Q92777 582 aaPredicted RBP8.96□□□□□ -0.98
SNRPA1-206ENST00000558059 SLC6A18Q96N87 628 aa8.96□□□□□ -0.98
SNRPA1-206ENST00000558059 CAMK1GQ96NX5 476 aa8.96□□□□□ -0.98
SNRPA1-206ENST00000558059 TRIM7Q9C029 511 aa8.96□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms