RNA–Protein interactions for RNA: ENST00000557945.5

CASC4-204, Transcript of cancer susceptibility 4, humanhuman

TSL 1 (best)

Gene CASC4, Length 1,386 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-204ENST00000557945 FAM118BQ9BPY3 351 aa21.66■■□□□ 1.06
CASC4-204ENST00000557945 TNKS2Q9H2K2 1166 aa21.66■■□□□ 1.06
CASC4-204ENST00000557945 C2orf42Q9NWW7 574 aa21.66■■□□□ 1.06
CASC4-204ENST00000557945 ZDBF2Q9HCK1 2354 aa21.66■■□□□ 1.06
CASC4-204ENST00000557945 NYNRINQ9P2P1 1898 aaKnown RBP21.66■■□□□ 1.06
CASC4-204ENST00000557945 EDDM13A0A1B0GTR0 161 aa21.65■■□□□ 1.06
CASC4-204ENST00000557945 H7C0C1 242 aa21.65■■□□□ 1.06
CASC4-204ENST00000557945 GPR37L1O60883 481 aa21.65■■□□□ 1.06
CASC4-204ENST00000557945 VAV1P15498 845 aa21.65■■□□□ 1.06
CASC4-204ENST00000557945 TCP1P17987 556 aaKnown RBP21.65■■□□□ 1.06
CASC4-204ENST00000557945 CCNCP24863 283 aa21.65■■□□□ 1.06
CASC4-204ENST00000557945 ATP5OP48047 213 aa21.65■■□□□ 1.06
CASC4-204ENST00000557945 NOMO1Q15155 1222 aa21.65■■□□□ 1.06
CASC4-204ENST00000557945 HNRNPA1L2Q32P51 320 aaKnown RBP21.65■■□□□ 1.06
CASC4-204ENST00000557945 INO80DQ53TQ3 878 aaPredicted RBP21.65■■□□□ 1.06
CASC4-204ENST00000557945 TMCO4Q5TGY1 634 aa21.65■■□□□ 1.06
CASC4-204ENST00000557945 PAPD7Q5XG87 772 aaKnown RBP21.65■■□□□ 1.06
CASC4-204ENST00000557945 C22orf39Q6P5X5 142 aa21.65■■□□□ 1.06
CASC4-204ENST00000557945 Q6ZVU0 165 aa21.65■■□□□ 1.06
CASC4-204ENST00000557945 METTL3Q86U44 580 aaKnown RBP21.65■■□□□ 1.06
CASC4-204ENST00000557945 COG1Q8WTW3 980 aa21.65■■□□□ 1.06
CASC4-204ENST00000557945 TFB1MQ8WVM0 346 aaKnown RBP21.65■■□□□ 1.06
CASC4-204ENST00000557945 MS4A14Q96JA4 679 aa21.65■■□□□ 1.06
CASC4-204ENST00000557945 ZNF599Q96NL3 588 aa21.65■■□□□ 1.06
CASC4-204ENST00000557945 C1QTNF1Q9BXJ1 281 aa21.65■■□□□ 1.06
CASC4-204ENST00000557945 CEP44Q9C0F1 390 aa21.65■■□□□ 1.06
CASC4-204ENST00000557945 BRD8Q9H0E9 1235 aa21.65■■□□□ 1.06
CASC4-204ENST00000557945 PRR33A8MZF0 331 aa21.64■■□□□ 1.06
CASC4-204ENST00000557945 COL9A1P20849 921 aa21.64■■□□□ 1.06
CASC4-204ENST00000557945 AVPR2P30518 371 aa21.64■■□□□ 1.06
CASC4-204ENST00000557945 CXCL12P48061 93 aa21.64■■□□□ 1.06
CASC4-204ENST00000557945 EIF3EP60228 445 aaKnown RBP21.64■■□□□ 1.06
CASC4-204ENST00000557945 RHOAP61586 193 aa21.64■■□□□ 1.06
CASC4-204ENST00000557945 PPIDQ08752 370 aaKnown RBP21.64■■□□□ 1.06
CASC4-204ENST00000557945 RFTN1Q14699 578 aaPredicted RBP21.64■■□□□ 1.06
CASC4-204ENST00000557945 LBRQ14739 615 aaKnown RBP21.64■■□□□ 1.06
CASC4-204ENST00000557945 CYTH1Q15438 398 aa21.64■■□□□ 1.06
CASC4-204ENST00000557945 CRY1Q16526 586 aa21.64■■□□□ 1.06
CASC4-204ENST00000557945 KIAA1211LQ6NV74 962 aa21.64■■□□□ 1.06
CASC4-204ENST00000557945 TMEM92Q6UXU6 159 aa21.64■■□□□ 1.06
CASC4-204ENST00000557945 MAIP1Q8WWC4 291 aa21.64■■□□□ 1.06
CASC4-204ENST00000557945 CINPQ9BW66 212 aaPredicted RBP21.64■■□□□ 1.06
CASC4-204ENST00000557945 TM6SF2Q9BZW4 377 aa21.64■■□□□ 1.06
CASC4-204ENST00000557945 R3HDM2Q9Y2K5 976 aaKnown RBP21.64■■□□□ 1.06
CASC4-204ENST00000557945 MUC22E2RYF6 1773 aaPredicted RBP21.63■■□□□ 1.05
CASC4-204ENST00000557945 A0A1W2PQF6 199 aa21.63■■□□□ 1.05
CASC4-204ENST00000557945 MCF2LO15068 1137 aa21.63■■□□□ 1.05
CASC4-204ENST00000557945 ZNF185O15231 689 aa21.63■■□□□ 1.05
CASC4-204ENST00000557945 MATN3O15232 486 aa21.63■■□□□ 1.05
CASC4-204ENST00000557945 FANCGO15287 622 aa21.63■■□□□ 1.05
CASC4-204ENST00000557945 SIN3BO75182 1162 aa21.63■■□□□ 1.05
CASC4-204ENST00000557945 NEBLO76041 1014 aa21.63■■□□□ 1.05
CASC4-204ENST00000557945 PEX11BO96011 259 aa21.63■■□□□ 1.05
CASC4-204ENST00000557945 RECQLP46063 649 aaPredicted RBP21.63■■□□□ 1.05
CASC4-204ENST00000557945 CCR3P51677 355 aa21.63■■□□□ 1.05
CASC4-204ENST00000557945 DGKEP52429 567 aa21.63■■□□□ 1.05
CASC4-204ENST00000557945 SATB1Q01826 763 aa21.63■■□□□ 1.05
CASC4-204ENST00000557945 SLC10A7Q0GE19 358 aa21.63■■□□□ 1.05
CASC4-204ENST00000557945 ZNF235Q14590 738 aa21.63■■□□□ 1.05
CASC4-204ENST00000557945 MARC1Q5VT66 337 aa21.63■■□□□ 1.05
CASC4-204ENST00000557945 BBS5Q8N3I7 341 aa21.63■■□□□ 1.05
CASC4-204ENST00000557945 PCDH20Q8N6Y1 951 aaKnown RBP21.63■■□□□ 1.05
CASC4-204ENST00000557945 DTWD2Q8NBA8 298 aa21.63■■□□□ 1.05
CASC4-204ENST00000557945 PTPRN2Q92932 1015 aa21.63■■□□□ 1.05
CASC4-204ENST00000557945 POLMQ9NP87 494 aaPredicted RBP21.63■■□□□ 1.05
CASC4-204ENST00000557945 PRSS16Q9NQE7 514 aa21.63■■□□□ 1.05
CASC4-204ENST00000557945 SEPT10Q9P0V9 454 aa21.63■■□□□ 1.05
CASC4-204ENST00000557945 SEPT3Q9UH03 358 aa21.63■■□□□ 1.05
CASC4-204ENST00000557945 SAR1BQ9Y6B6 198 aa21.63■■□□□ 1.05
CASC4-204ENST00000557945 TCRBV21S2A2A0A5A6 115 aa21.62■■□□□ 1.05
CASC4-204ENST00000557945 TARSL2A2RTX5 802 aaKnown RBP21.62■■□□□ 1.05
CASC4-204ENST00000557945 HACD1B0YJ81 288 aa21.62■■□□□ 1.05
CASC4-204ENST00000557945 KCNK1O00180 336 aa21.62■■□□□ 1.05
CASC4-204ENST00000557945 CES2O00748 559 aa21.62■■□□□ 1.05
CASC4-204ENST00000557945 PRLRP16471 622 aa21.62■■□□□ 1.05
CASC4-204ENST00000557945 RENBPP51606 427 aa21.62■■□□□ 1.05
CASC4-204ENST00000557945 ZNF33AQ06730 810 aa21.62■■□□□ 1.05
CASC4-204ENST00000557945 XRCC4Q13426 336 aa21.62■■□□□ 1.05
CASC4-204ENST00000557945 C9orf64Q5T6V5 341 aa21.62■■□□□ 1.05
CASC4-204ENST00000557945 DARS2Q6PI48 645 aaKnown RBP21.62■■□□□ 1.05
CASC4-204ENST00000557945 RASGEF1CQ8N431 466 aa21.62■■□□□ 1.05
CASC4-204ENST00000557945 RYBPQ8N488 228 aaPredicted RBP21.62■■□□□ 1.05
CASC4-204ENST00000557945 ISG20Q96AZ6 181 aaKnown RBP21.62■■□□□ 1.05
CASC4-204ENST00000557945 CCDC114Q96M63 670 aa21.62■■□□□ 1.05
CASC4-204ENST00000557945 QKIQ96PU8 341 aaKnown RBP eCLIP21.62■■□□□ 1.052e-7■□□□□ 9.9
CASC4-204ENST00000557945 HHIPQ96QV1 700 aa21.62■■□□□ 1.05
CASC4-204ENST00000557945 C10orf88Q9H8K7 445 aa21.62■■□□□ 1.05
CASC4-204ENST00000557945 FARP1Q9Y4F1 1045 aaPredicted RBP21.62■■□□□ 1.05
CASC4-204ENST00000557945 CUL9Q8IWT3 2517 aa21.62■■□□□ 1.05
CASC4-204ENST00000557945 SHROOM3Q8TF72 1996 aa21.62■■□□□ 1.05
CASC4-204ENST00000557945 PGRMC1O00264 195 aaKnown RBP21.61■■□□□ 1.05
CASC4-204ENST00000557945 ZBTB24O43167 697 aaPredicted RBP21.61■■□□□ 1.05
CASC4-204ENST00000557945 RBP3P10745 1247 aa21.61■■□□□ 1.05
CASC4-204ENST00000557945 CCNB1P14635 433 aa21.61■■□□□ 1.05
CASC4-204ENST00000557945 MMP13P45452 471 aa21.61■■□□□ 1.05
CASC4-204ENST00000557945 SNRPD1P62314 119 aaKnown RBP21.61■■□□□ 1.05
CASC4-204ENST00000557945 CAMK2GQ13555 558 aaPredicted RBP21.61■■□□□ 1.05
CASC4-204ENST00000557945 HNRNPDQ14103 355 aaKnown RBP21.61■■□□□ 1.05
CASC4-204ENST00000557945 PRKD1Q15139 912 aaPredicted RBP21.61■■□□□ 1.05
CASC4-204ENST00000557945 SLC45A4Q5BKX6 768 aa21.61■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms