RNA–Protein interactions for RNA: ENST00000557442.5

HNRNPC-232, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 2

Gene HNRNPC, Length 1,308 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-232ENST00000557442 CEP44Q9C0F1 390 aa10.8□□□□□ -0.68
HNRNPC-232ENST00000557442 SLC39A8Q9C0K1 460 aa10.8□□□□□ -0.68
HNRNPC-232ENST00000557442 LACRTQ9GZZ8 138 aa10.8□□□□□ -0.68
HNRNPC-232ENST00000557442 KLC2Q9H0B6 622 aa10.8□□□□□ -0.68
HNRNPC-232ENST00000557442 TNKS2Q9H2K2 1166 aa10.8□□□□□ -0.68
HNRNPC-232ENST00000557442 SP110Q9HB58 689 aa10.8□□□□□ -0.68
HNRNPC-232ENST00000557442 ETNK2Q9NVF9 386 aa10.8□□□□□ -0.68
HNRNPC-232ENST00000557442 USP36Q9P275 1121 aaKnown RBP10.8□□□□□ -0.68
HNRNPC-232ENST00000557442 NCDNQ9UBB6 729 aa10.8□□□□□ -0.68
HNRNPC-232ENST00000557442 SALL4Q9UJQ4 1053 aa10.8□□□□□ -0.68
HNRNPC-232ENST00000557442 FARP1Q9Y4F1 1045 aaPredicted RBP10.8□□□□□ -0.68
HNRNPC-232ENST00000557442 DUSP10Q9Y6W6 482 aa10.8□□□□□ -0.68
HNRNPC-232ENST00000557442 CFAP54Q96N23 3096 aa10.79□□□□□ -0.68
HNRNPC-232ENST00000557442 DMXL1Q9Y485 3027 aa10.79□□□□□ -0.68
HNRNPC-232ENST00000557442 CXorf51AA0A1B0GTR3 108 aa10.79□□□□□ -0.68
HNRNPC-232ENST00000557442 MACROD2A1Z1Q3 448 aa10.79□□□□□ -0.68
HNRNPC-232ENST00000557442 BTNL10A8MVZ5 291 aa10.79□□□□□ -0.68
HNRNPC-232ENST00000557442 ALOX15BO15296 676 aa10.79□□□□□ -0.68
HNRNPC-232ENST00000557442 MID1O15344 667 aa10.79□□□□□ -0.68
HNRNPC-232ENST00000557442 PSTPIP1O43586 416 aa10.79□□□□□ -0.68
HNRNPC-232ENST00000557442 GFRA3O60609 400 aa10.79□□□□□ -0.68
HNRNPC-232ENST00000557442 TMCC1O94876 653 aa10.79□□□□□ -0.68
HNRNPC-232ENST00000557442 CD160O95971 181 aa10.79□□□□□ -0.68
HNRNPC-232ENST00000557442 ADH1BP00325 375 aa10.79□□□□□ -0.68
HNRNPC-232ENST00000557442 PAPOLAP51003 745 aaKnown RBP10.79□□□□□ -0.68
HNRNPC-232ENST00000557442 DNA2P51530 1060 aa10.79□□□□□ -0.68
HNRNPC-232ENST00000557442 RPL6Q02878 288 aaKnown RBP10.79□□□□□ -0.68
HNRNPC-232ENST00000557442 ZBTB16Q05516 673 aa10.79□□□□□ -0.68
HNRNPC-232ENST00000557442 PLK5Q496M5 336 aa10.79□□□□□ -0.68
HNRNPC-232ENST00000557442 ANKRD20A8PQ5CZ79 823 aa10.79□□□□□ -0.68
HNRNPC-232ENST00000557442 LRRC38Q5VT99 294 aa10.79□□□□□ -0.68
HNRNPC-232ENST00000557442 AFMIDQ63HM1 303 aa10.79□□□□□ -0.68
HNRNPC-232ENST00000557442 PMS2CLQ68D20 193 aa10.79□□□□□ -0.68
HNRNPC-232ENST00000557442 LAIR1Q6GTX8 287 aa10.79□□□□□ -0.68
HNRNPC-232ENST00000557442 ASCL5Q7RTU5 278 aa10.79□□□□□ -0.68
HNRNPC-232ENST00000557442 METTL3Q86U44 580 aaKnown RBP10.79□□□□□ -0.68
HNRNPC-232ENST00000557442 LRRC8AQ8IWT6 810 aa10.79□□□□□ -0.68
HNRNPC-232ENST00000557442 ARHGAP12Q8IWW6 846 aa10.79□□□□□ -0.68
HNRNPC-232ENST00000557442 LZTR1Q8N653 840 aa10.79□□□□□ -0.68
HNRNPC-232ENST00000557442 PCDH20Q8N6Y1 951 aaKnown RBP10.79□□□□□ -0.68
HNRNPC-232ENST00000557442 GRIN3AQ8TCU5 1115 aa10.79□□□□□ -0.68
HNRNPC-232ENST00000557442 GANCQ8TET4 914 aa10.79□□□□□ -0.68
HNRNPC-232ENST00000557442 RAPGEF5Q92565 580 aa10.79□□□□□ -0.68
HNRNPC-232ENST00000557442 ZC3H10Q96K80 434 aaKnown RBP10.79□□□□□ -0.68
HNRNPC-232ENST00000557442 CALR3Q96L12 384 aaKnown RBP10.79□□□□□ -0.68
HNRNPC-232ENST00000557442 TM6SF2Q9BZW4 377 aa10.79□□□□□ -0.68
HNRNPC-232ENST00000557442 DUSP15Q9H1R2 295 aaPredicted RBP10.79□□□□□ -0.68
HNRNPC-232ENST00000557442 PABPC3Q9H361 631 aaKnown RBP10.79□□□□□ -0.68
HNRNPC-232ENST00000557442 UBA2Q9UBT2 640 aaPredicted RBP10.79□□□□□ -0.68
HNRNPC-232ENST00000557442 TRIM10Q9UDY6 481 aa10.79□□□□□ -0.68
HNRNPC-232ENST00000557442 MBD1Q9UIS9 605 aaPredicted RBP10.79□□□□□ -0.68
HNRNPC-232ENST00000557442 GMEB2Q9UKD1 530 aa10.79□□□□□ -0.68
HNRNPC-232ENST00000557442 ALG6Q9Y672 507 aa10.79□□□□□ -0.68
HNRNPC-232ENST00000557442 PTPRZ1P23471 2315 aaPredicted RBP10.79□□□□□ -0.68
HNRNPC-232ENST00000557442 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa10.78□□□□□ -0.68
HNRNPC-232ENST00000557442 A0A0U1RQJ8 604 aa10.78□□□□□ -0.68
HNRNPC-232ENST00000557442 C1QTNF3-AMACRE9PGA6 284 aa10.78□□□□□ -0.68
HNRNPC-232ENST00000557442 J3KR12 359 aa10.78□□□□□ -0.68
HNRNPC-232ENST00000557442 MCF2LO15068 1137 aa10.78□□□□□ -0.68
HNRNPC-232ENST00000557442 MFSD11O43934 449 aa10.78□□□□□ -0.68
HNRNPC-232ENST00000557442 PRAMEF11O60813 436 aa10.78□□□□□ -0.68
HNRNPC-232ENST00000557442 NDUFS2O75306 463 aa10.78□□□□□ -0.68
HNRNPC-232ENST00000557442 RHOBTB1O94844 696 aa10.78□□□□□ -0.68
HNRNPC-232ENST00000557442 IGLV3-19P01714 112 aa10.78□□□□□ -0.68
HNRNPC-232ENST00000557442 KDELR1P24390 212 aa10.78□□□□□ -0.68
HNRNPC-232ENST00000557442 IL4RP24394 825 aa10.78□□□□□ -0.68
HNRNPC-232ENST00000557442 CD6P30203 668 aa10.78□□□□□ -0.68
HNRNPC-232ENST00000557442 OXTRP30559 389 aa10.78□□□□□ -0.68
HNRNPC-232ENST00000557442 SLC8A1P32418 973 aa10.78□□□□□ -0.68
HNRNPC-232ENST00000557442 DHPSP49366 369 aaPredicted RBP10.78□□□□□ -0.68
HNRNPC-232ENST00000557442 CCNHP51946 323 aaPredicted RBP10.78□□□□□ -0.68
HNRNPC-232ENST00000557442 RHOAP61586 193 aa10.78□□□□□ -0.68
HNRNPC-232ENST00000557442 CCZ1BP86790 482 aa10.78□□□□□ -0.68
HNRNPC-232ENST00000557442 CCZ1P86791 482 aaPredicted RBP10.78□□□□□ -0.68
HNRNPC-232ENST00000557442 IFI16Q16666 785 aaKnown RBP10.78□□□□□ -0.68
HNRNPC-232ENST00000557442 POM121L1PQ3SYA9 428 aa10.78□□□□□ -0.68
HNRNPC-232ENST00000557442 NCBP2-AS2Q69YL0 99 aa10.78□□□□□ -0.68
HNRNPC-232ENST00000557442 SLC36A4Q6YBV0 504 aa10.78□□□□□ -0.68
HNRNPC-232ENST00000557442 ARHGAP36Q6ZRI8 547 aa10.78□□□□□ -0.68
HNRNPC-232ENST00000557442 ARMCX6Q7L4S7 300 aa10.78□□□□□ -0.68
HNRNPC-232ENST00000557442 LPCAT2Q7L5N7 544 aa10.78□□□□□ -0.68
HNRNPC-232ENST00000557442 TP53INP2Q8IXH6 220 aa10.78□□□□□ -0.68
HNRNPC-232ENST00000557442 TMEFF1Q8IYR6 380 aa10.78□□□□□ -0.68
HNRNPC-232ENST00000557442 RYBPQ8N488 228 aaPredicted RBP10.78□□□□□ -0.68
HNRNPC-232ENST00000557442 ATPAF2Q8N5M1 289 aa10.78□□□□□ -0.68
HNRNPC-232ENST00000557442 OR2A12Q8NGT7 310 aa10.78□□□□□ -0.68
HNRNPC-232ENST00000557442 PCDH19Q8TAB3 1148 aa10.78□□□□□ -0.68
HNRNPC-232ENST00000557442 PIP4K2CQ8TBX8 421 aa10.78□□□□□ -0.68
HNRNPC-232ENST00000557442 TRAF3IP1Q8TDR0 691 aaPredicted RBP10.78□□□□□ -0.68
HNRNPC-232ENST00000557442 CASKIN2Q8WXE0 1202 aa10.78□□□□□ -0.68
HNRNPC-232ENST00000557442 FAF2Q96CS3 445 aa10.78□□□□□ -0.68
HNRNPC-232ENST00000557442 TOE1Q96GM8 510 aaKnown RBP10.78□□□□□ -0.68
HNRNPC-232ENST00000557442 FAM129BQ96TA1 746 aa10.78□□□□□ -0.68
HNRNPC-232ENST00000557442 ZDHHC6Q9H6R6 413 aa10.78□□□□□ -0.68
HNRNPC-232ENST00000557442 PDFQ9HBH1 243 aa10.78□□□□□ -0.68
HNRNPC-232ENST00000557442 ITM2CQ9NQX7 267 aa10.78□□□□□ -0.68
HNRNPC-232ENST00000557442 FBXL12Q9NXK8 326 aa10.78□□□□□ -0.68
HNRNPC-232ENST00000557442 DDX56Q9NY93 547 aaKnown RBP10.78□□□□□ -0.68
HNRNPC-232ENST00000557442 IL36AQ9UHA7 158 aa10.78□□□□□ -0.68
HNRNPC-232ENST00000557442 SCML1Q9UN30 329 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms