RNA–Protein interactions for RNA: ENST00000556867.1

TDP1-216, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 2

Gene TDP1, Length 748 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-216ENST00000556867 LRRC19Q9H756 370 aa23.32■■□□□ 1.32
TDP1-216ENST00000556867 OSGEPQ9NPF4 335 aa23.32■■□□□ 1.32
TDP1-216ENST00000556867 STAU2Q9NUL3 570 aaKnown RBP eCLIP23.32■■□□□ 1.32
TDP1-216ENST00000556867 SARDHQ9UL12 918 aa23.32■■□□□ 1.32
TDP1-216ENST00000556867 INTUQ9ULD6 942 aa23.32■■□□□ 1.32
TDP1-216ENST00000556867 FCF1Q9Y324 198 aaKnown RBP23.32■■□□□ 1.32
TDP1-216ENST00000556867 ACTL7AQ9Y615 435 aa23.32■■□□□ 1.32
TDP1-216ENST00000556867 CACNA1EQ15878 2313 aa23.32■■□□□ 1.32
TDP1-216ENST00000556867 LAMA1P25391 3075 aa23.31■■□□□ 1.32
TDP1-216ENST00000556867 H3BRJ5 948 aa23.31■■□□□ 1.32
TDP1-216ENST00000556867 KHNYNO15037 678 aaKnown RBP23.31■■□□□ 1.32
TDP1-216ENST00000556867 DAPK3O43293 454 aa23.31■■□□□ 1.32
TDP1-216ENST00000556867 RNASEH2AO75792 299 aaKnown RBP23.31■■□□□ 1.32
TDP1-216ENST00000556867 ERCC2P18074 760 aa23.31■■□□□ 1.32
TDP1-216ENST00000556867 CHRNA3P32297 505 aa23.31■■□□□ 1.32
TDP1-216ENST00000556867 DRD3P35462 400 aa23.31■■□□□ 1.32
TDP1-216ENST00000556867 RECQLP46063 649 aaPredicted RBP23.31■■□□□ 1.32
TDP1-216ENST00000556867 HADHQ16836 314 aaKnown RBP23.31■■□□□ 1.32
TDP1-216ENST00000556867 RABEPKQ7Z6M1 372 aa23.31■■□□□ 1.32
TDP1-216ENST00000556867 HDDC3Q8N4P3 179 aa23.31■■□□□ 1.32
TDP1-216ENST00000556867 PIP4K2CQ8TBX8 421 aa23.31■■□□□ 1.32
TDP1-216ENST00000556867 HSPH1Q92598 858 aa23.31■■□□□ 1.32
TDP1-216ENST00000556867 KLC2Q9H0B6 622 aa23.31■■□□□ 1.32
TDP1-216ENST00000556867 NEUROG2Q9H2A3 272 aa23.31■■□□□ 1.32
TDP1-216ENST00000556867 PATE3B3GLJ2 98 aa23.3■■□□□ 1.32
TDP1-216ENST00000556867 MTA2O94776 668 aa23.3■■□□□ 1.32
TDP1-216ENST00000556867 CTSLP07711 333 aa23.3■■□□□ 1.32
TDP1-216ENST00000556867 FECHP22830 423 aa23.3■■□□□ 1.32
TDP1-216ENST00000556867 MAN1A1P33908 653 aa23.3■■□□□ 1.32
TDP1-216ENST00000556867 ARL4AP40617 200 aa23.3■■□□□ 1.32
TDP1-216ENST00000556867 METAP1P53582 386 aa23.3■■□□□ 1.32
TDP1-216ENST00000556867 AASDHQ4L235 1098 aaPredicted RBP23.3■■□□□ 1.32
TDP1-216ENST00000556867 DCAF12L1Q5VU92 463 aa23.3■■□□□ 1.32
TDP1-216ENST00000556867 AFMIDQ63HM1 303 aa23.3■■□□□ 1.32
TDP1-216ENST00000556867 DPY19L3Q6ZPD9 716 aa23.3■■□□□ 1.32
TDP1-216ENST00000556867 POLNQ7Z5Q5 900 aa23.3■■□□□ 1.32
TDP1-216ENST00000556867 ZNF354CQ86Y25 554 aa23.3■■□□□ 1.32
TDP1-216ENST00000556867 RHOT2Q8IXI1 618 aa23.3■■□□□ 1.32
TDP1-216ENST00000556867 PLPP6Q8IY26 295 aa23.3■■□□□ 1.32
TDP1-216ENST00000556867 CCDC170Q8IYT3 715 aa23.3■■□□□ 1.32
TDP1-216ENST00000556867 TMIEQ8NEW7 156 aa23.3■■□□□ 1.32
TDP1-216ENST00000556867 CEP76Q8TAP6 659 aa23.3■■□□□ 1.32
TDP1-216ENST00000556867 SLC35G2Q8TBE7 412 aa23.3■■□□□ 1.32
TDP1-216ENST00000556867 CASKIN2Q8WXE0 1202 aa23.3■■□□□ 1.32
TDP1-216ENST00000556867 RFFLQ8WZ73 363 aa23.3■■□□□ 1.32
TDP1-216ENST00000556867 C6orf106Q9H6K1 298 aaPredicted RBP23.3■■□□□ 1.32
TDP1-216ENST00000556867 PCDH18Q9HCL0 1135 aa23.3■■□□□ 1.32
TDP1-216ENST00000556867 BUB1O43683 1085 aa23.29■■□□□ 1.32
TDP1-216ENST00000556867 LCA5LO95447 670 aa23.29■■□□□ 1.32
TDP1-216ENST00000556867 PRNPP04156 253 aa23.29■■□□□ 1.32
TDP1-216ENST00000556867 DUOXA1Q1HG43 343 aa23.29■■□□□ 1.32
TDP1-216ENST00000556867 TRIM61Q5EBN2 209 aa23.29■■□□□ 1.32
TDP1-216ENST00000556867 CARD16Q5EG05 197 aa23.29■■□□□ 1.32
TDP1-216ENST00000556867 SLC23A3Q6PIS1 610 aa23.29■■□□□ 1.32
TDP1-216ENST00000556867 CPNE8Q86YQ8 564 aa23.29■■□□□ 1.32
TDP1-216ENST00000556867 RGL4Q8IZJ4 473 aa23.29■■□□□ 1.32
TDP1-216ENST00000556867 CHST14Q8NCH0 376 aa23.29■■□□□ 1.32
TDP1-216ENST00000556867 NETO1Q8TDF5 533 aa23.29■■□□□ 1.32
TDP1-216ENST00000556867 SUSD2Q9UGT4 822 aa23.29■■□□□ 1.32
TDP1-216ENST00000556867 ZBTB32Q9Y2Y4 487 aaPredicted RBP23.29■■□□□ 1.32
TDP1-216ENST00000556867 LNP1A1A4G5 178 aa23.28■■□□□ 1.32
TDP1-216ENST00000556867 ARHGAP42A6NI28 874 aa23.28■■□□□ 1.32
TDP1-216ENST00000556867 C10orf142B7Z368 130 aa23.28■■□□□ 1.32
TDP1-216ENST00000556867 SLC7A4O43246 635 aa23.28■■□□□ 1.32
TDP1-216ENST00000556867 GDF9O60383 454 aa23.28■■□□□ 1.32
TDP1-216ENST00000556867 CDC25BP30305 580 aa23.28■■□□□ 1.32
TDP1-216ENST00000556867 SSR1P43307 286 aaKnown RBP23.28■■□□□ 1.32
TDP1-216ENST00000556867 ADPRHP54922 357 aa23.28■■□□□ 1.32
TDP1-216ENST00000556867 TCEAL1Q15170 157 aa23.28■■□□□ 1.32
TDP1-216ENST00000556867 INO80DQ53TQ3 878 aaPredicted RBP23.28■■□□□ 1.32
TDP1-216ENST00000556867 LEKR1Q6ZMV7 388 aa23.28■■□□□ 1.32
TDP1-216ENST00000556867 ARHGAP12Q8IWW6 846 aa23.28■■□□□ 1.32
TDP1-216ENST00000556867 NPWQ8N729 165 aa23.28■■□□□ 1.32
TDP1-216ENST00000556867 OR2T34Q8NGX1 318 aa23.28■■□□□ 1.32
TDP1-216ENST00000556867 FAM71BQ8TC56 605 aa23.28■■□□□ 1.32
TDP1-216ENST00000556867 TSC1Q92574 1164 aa23.28■■□□□ 1.32
TDP1-216ENST00000556867 CELF6Q96J87 481 aaKnown RBP23.28■■□□□ 1.32
TDP1-216ENST00000556867 CSPG4P5Q96PW8 444 aa23.28■■□□□ 1.32
TDP1-216ENST00000556867 SLC39A8Q9C0K1 460 aa23.28■■□□□ 1.32
TDP1-216ENST00000556867 RXFP3Q9NSD7 469 aa23.28■■□□□ 1.32
TDP1-216ENST00000556867 RCOR3Q9P2K3 495 aaPredicted RBP23.28■■□□□ 1.32
TDP1-216ENST00000556867 IL36AQ9UHA7 158 aa23.28■■□□□ 1.32
TDP1-216ENST00000556867 WASF2Q9Y6W5 498 aa23.28■■□□□ 1.32
TDP1-216ENST00000556867 PCDH15Q96QU1 1955 aa23.27■■□□□ 1.32
TDP1-216ENST00000556867 LOC105378220A0A1B0GUY1 285 aaPredicted RBP23.27■■□□□ 1.32
TDP1-216ENST00000556867 LRRC72A6NJI9 287 aa23.27■■□□□ 1.32
TDP1-216ENST00000556867 TMCC1O94876 653 aa23.27■■□□□ 1.32
TDP1-216ENST00000556867 GSRP00390 522 aa23.27■■□□□ 1.32
TDP1-216ENST00000556867 SERPINF2P08697 491 aa23.27■■□□□ 1.32
TDP1-216ENST00000556867 SDHBP21912 280 aa23.27■■□□□ 1.32
TDP1-216ENST00000556867 MAOBP27338 520 aa23.27■■□□□ 1.32
TDP1-216ENST00000556867 ARHGAP25P42331 645 aa23.27■■□□□ 1.32
TDP1-216ENST00000556867 DNA2P51530 1060 aa23.27■■□□□ 1.32
TDP1-216ENST00000556867 CCNHP51946 323 aaPredicted RBP23.27■■□□□ 1.32
TDP1-216ENST00000556867 LIMK1P53667 647 aa23.27■■□□□ 1.32
TDP1-216ENST00000556867 IRX4P78413 519 aa23.27■■□□□ 1.32
TDP1-216ENST00000556867 RSPO4Q2I0M5 234 aaPredicted RBP23.27■■□□□ 1.32
TDP1-216ENST00000556867 KIAA0895LQ68EN5 471 aa23.27■■□□□ 1.32
TDP1-216ENST00000556867 NCEH1Q6PIU2 408 aa23.27■■□□□ 1.32
TDP1-216ENST00000556867 LZTR1Q8N653 840 aa23.27■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms