RNA–Protein interactions for RNA: ENST00000556768.5

SCFD1-222, Transcript of sec1 family domain containing 1, humanhuman

TSL 1 (best)

Gene SCFD1, Length 1,829 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-222ENST00000556768 NUDT1P36639 197 aa7.5□□□□□ -1.21
SCFD1-222ENST00000556768 GGCXP38435 758 aa7.5□□□□□ -1.21
SCFD1-222ENST00000556768 GRIA4P48058 902 aa7.5□□□□□ -1.21
SCFD1-222ENST00000556768 NUMBP49757 651 aa7.5□□□□□ -1.21
SCFD1-222ENST00000556768 GALCP54803 685 aa7.5□□□□□ -1.21
SCFD1-222ENST00000556768 GEMIN4P57678 1058 aaKnown RBP7.5□□□□□ -1.21
SCFD1-222ENST00000556768 FMO1Q01740 532 aa7.5□□□□□ -1.21
SCFD1-222ENST00000556768 TRIP6Q15654 476 aaKnown RBP7.5□□□□□ -1.21
SCFD1-222ENST00000556768 HLA-BQ31612 363 aa7.5□□□□□ -1.21
SCFD1-222ENST00000556768 INAVAQ3KP66 663 aa7.5□□□□□ -1.21
SCFD1-222ENST00000556768 C5orf22Q49AR2 442 aa7.5□□□□□ -1.21
SCFD1-222ENST00000556768 KIAA0895LQ68EN5 471 aa7.5□□□□□ -1.21
SCFD1-222ENST00000556768 NCEH1Q6PIU2 408 aa7.5□□□□□ -1.21
SCFD1-222ENST00000556768 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP7.5□□□□□ -1.21
SCFD1-222ENST00000556768 VASH1Q7L8A9 365 aaPredicted RBP7.5□□□□□ -1.21
SCFD1-222ENST00000556768 STRADAQ7RTN6 431 aa7.5□□□□□ -1.21
SCFD1-222ENST00000556768 C14orf80Q86SX3 495 aa7.5□□□□□ -1.21
SCFD1-222ENST00000556768 PRPF39Q86UA1 669 aaKnown RBP7.5□□□□□ -1.21
SCFD1-222ENST00000556768 C3orf20Q8ND61 904 aa7.5□□□□□ -1.21
SCFD1-222ENST00000556768 RXFP2Q8WXD0 754 aa7.5□□□□□ -1.21
SCFD1-222ENST00000556768 PPP1R16AQ96I34 528 aa7.5□□□□□ -1.21
SCFD1-222ENST00000556768 AGPAT1Q99943 283 aa7.5□□□□□ -1.21
SCFD1-222ENST00000556768 AASDHPPTQ9NRN7 309 aa7.5□□□□□ -1.21
SCFD1-222ENST00000556768 MPP6Q9NZW5 540 aa7.5□□□□□ -1.21
SCFD1-222ENST00000556768 PPARGC1AQ9UBK2 798 aaKnown RBP7.5□□□□□ -1.21
SCFD1-222ENST00000556768 ADAMTS1Q9UHI8 967 aa7.5□□□□□ -1.21
SCFD1-222ENST00000556768 MYO6Q9UM54 1294 aa7.5□□□□□ -1.21
SCFD1-222ENST00000556768 HS3ST2Q9Y278 367 aa7.5□□□□□ -1.21
SCFD1-222ENST00000556768 ANKRD6Q9Y2G4 727 aa7.5□□□□□ -1.21
SCFD1-222ENST00000556768 SPEGQ15772 3267 aa7.5□□□□□ -1.21
SCFD1-222ENST00000556768 MYO16Q9Y6X6 1858 aa7.5□□□□□ -1.21
SCFD1-222ENST00000556768 A0A1W2PPC4 97 aa7.5□□□□□ -1.21
SCFD1-222ENST00000556768 SIGLEC16A6NMB1 481 aa7.5□□□□□ -1.21
SCFD1-222ENST00000556768 GIPC1O14908 333 aa7.5□□□□□ -1.21
SCFD1-222ENST00000556768 EPHB6O15197 1021 aa7.5□□□□□ -1.21
SCFD1-222ENST00000556768 SLC7A4O43246 635 aa7.5□□□□□ -1.21
SCFD1-222ENST00000556768 MAGEC1O60732 1142 aa7.5□□□□□ -1.21
SCFD1-222ENST00000556768 CNTN5O94779 1100 aa7.5□□□□□ -1.21
SCFD1-222ENST00000556768 ENDOD1O94919 500 aa7.5□□□□□ -1.21
SCFD1-222ENST00000556768 S1PR4O95977 384 aa7.5□□□□□ -1.21
SCFD1-222ENST00000556768 PRNPP04156 253 aa7.5□□□□□ -1.21
SCFD1-222ENST00000556768 ZNF883P0CG24 379 aa7.5□□□□□ -1.21
SCFD1-222ENST00000556768 UNGP13051 313 aaPredicted RBP7.5□□□□□ -1.21
SCFD1-222ENST00000556768 TFE3P19532 575 aaPredicted RBP7.5□□□□□ -1.21
SCFD1-222ENST00000556768 PTPN9P43378 593 aa7.5□□□□□ -1.21
SCFD1-222ENST00000556768 DNA2P51530 1060 aa7.5□□□□□ -1.21
SCFD1-222ENST00000556768 SHC2P98077 582 aa7.5□□□□□ -1.21
SCFD1-222ENST00000556768 FOXC1Q12948 553 aa7.5□□□□□ -1.21
SCFD1-222ENST00000556768 CLEC16AQ2KHT3 1053 aa7.5□□□□□ -1.21
SCFD1-222ENST00000556768 DNAJC24Q6P3W2 148 aa7.5□□□□□ -1.21
SCFD1-222ENST00000556768 SCYL2Q6P3W7 929 aa7.5□□□□□ -1.21
SCFD1-222ENST00000556768 PHLDB2Q86SQ0 1253 aa7.5□□□□□ -1.21
SCFD1-222ENST00000556768 ZNF354CQ86Y25 554 aa7.5□□□□□ -1.21
SCFD1-222ENST00000556768 PHF13Q86YI8 300 aaPredicted RBP7.5□□□□□ -1.21
SCFD1-222ENST00000556768 SH2D3CQ8N5H7 860 aa7.5□□□□□ -1.21
SCFD1-222ENST00000556768 EMC1Q8N766 993 aa7.5□□□□□ -1.21
SCFD1-222ENST00000556768 DCAF4L2Q8NA75 395 aa7.5□□□□□ -1.21
SCFD1-222ENST00000556768 VCPIP1Q96JH7 1222 aa7.5□□□□□ -1.21
SCFD1-222ENST00000556768 CNTNAP3BQ96NU0 1288 aa7.5□□□□□ -1.21
SCFD1-222ENST00000556768 CDC6Q99741 560 aa7.5□□□□□ -1.21
SCFD1-222ENST00000556768 CNTNAP3Q9BZ76 1288 aa7.5□□□□□ -1.21
SCFD1-222ENST00000556768 OSBPL2Q9H1P3 480 aa7.5□□□□□ -1.21
SCFD1-222ENST00000556768 ATP13A1Q9HD20 1204 aa7.5□□□□□ -1.21
SCFD1-222ENST00000556768 TM9SF3Q9HD45 589 aa7.5□□□□□ -1.21
SCFD1-222ENST00000556768 TM7SF3Q9NS93 570 aa7.5□□□□□ -1.21
SCFD1-222ENST00000556768 TMEM63CQ9P1W3 806 aa7.5□□□□□ -1.21
SCFD1-222ENST00000556768 MYO18AQ92614 2054 aaKnown RBP7.5□□□□□ -1.21
SCFD1-222ENST00000556768 SPAG17Q6Q759 2223 aa7.49□□□□□ -1.21
SCFD1-222ENST00000556768 FREM2Q5SZK8 3169 aa7.49□□□□□ -1.21
SCFD1-222ENST00000556768 FRYQ5TBA9 3013 aa7.49□□□□□ -1.21
SCFD1-222ENST00000556768 IGLV3-10A0A075B6K4 115 aa7.49□□□□□ -1.21
SCFD1-222ENST00000556768 A0A1B0GVT2 93 aa7.49□□□□□ -1.21
SCFD1-222ENST00000556768 C2CD4BA6NLJ0 364 aa7.49□□□□□ -1.21
SCFD1-222ENST00000556768 GOLGA6L19H0YKK7 550 aa7.49□□□□□ -1.21
SCFD1-222ENST00000556768 KPNA3O00505 521 aaPredicted RBP7.49□□□□□ -1.21
SCFD1-222ENST00000556768 SH3BP5O60239 455 aa7.49□□□□□ -1.21
SCFD1-222ENST00000556768 ATP1A3P13637 1013 aa7.49□□□□□ -1.21
SCFD1-222ENST00000556768 CHRNB2P17787 502 aa7.49□□□□□ -1.21
SCFD1-222ENST00000556768 GPD1P21695 349 aa7.49□□□□□ -1.21
SCFD1-222ENST00000556768 VARSP26640 1264 aaKnown RBP7.49□□□□□ -1.21
SCFD1-222ENST00000556768 PMLP29590 882 aa7.49□□□□□ -1.21
SCFD1-222ENST00000556768 RFC1P35251 1148 aaPredicted RBP7.49□□□□□ -1.21
SCFD1-222ENST00000556768 ARRB1P49407 418 aaPredicted RBP7.49□□□□□ -1.21
SCFD1-222ENST00000556768 CCR5P51681 352 aa7.49□□□□□ -1.21
SCFD1-222ENST00000556768 AIF1P55008 147 aa7.49□□□□□ -1.21
SCFD1-222ENST00000556768 STAT4Q14765 748 aa7.49□□□□□ -1.21
SCFD1-222ENST00000556768 NCAPHQ15003 741 aa7.49□□□□□ -1.21
SCFD1-222ENST00000556768 POLD3Q15054 466 aaPredicted RBP7.49□□□□□ -1.21
SCFD1-222ENST00000556768 ZNF423Q2M1K9 1284 aa7.49□□□□□ -1.21
SCFD1-222ENST00000556768 CCDC14Q49A88 953 aa7.49□□□□□ -1.21
SCFD1-222ENST00000556768 ALFQ53S48 1182 aa7.49□□□□□ -1.21
SCFD1-222ENST00000556768 EFHC2Q5JST6 749 aa7.49□□□□□ -1.21
SCFD1-222ENST00000556768 TBCELQ5QJ74 424 aa7.49□□□□□ -1.21
SCFD1-222ENST00000556768 ALG1LQ6GMV1 187 aa7.49□□□□□ -1.21
SCFD1-222ENST00000556768 Q6ZVU0 165 aa7.49□□□□□ -1.21
SCFD1-222ENST00000556768 SLFN11Q7Z7L1 901 aa7.49□□□□□ -1.21
SCFD1-222ENST00000556768 PIP4P1Q86T03 277 aa7.49□□□□□ -1.21
SCFD1-222ENST00000556768 NAXDQ8IW45 347 aa7.49□□□□□ -1.21
SCFD1-222ENST00000556768 DRC7Q8IY82 874 aa7.49□□□□□ -1.21
SCFD1-222ENST00000556768 PIP4K2CQ8TBX8 421 aa7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 111.5 ms